Contig 010933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014M11Sequence470010933 (3)emb|CDP14272.1|1e-58unnamed protein product [Coffea canephora]805014114 (3)emb|CDP14272.1|2e-141unnamed protein product [Coffea canephora]
JMSF047J15Sequence694010933 (3)ref|XP_009587250.1|2e-112PREDICTED: DNA replication licensing factor MCM5 [Nicotiana tomentosiformis]805014114 (3)emb|CDP14272.1|1e-127unnamed protein product [Coffea canephora]
JMSF050N14Sequence636010933 (3)ref|XP_009587250.1|5e-97PREDICTED: DNA replication licensing factor MCM5 [Nicotiana tomentosiformis]751014114 (3)emb|CDP14272.1|4e-127unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047J15+ GTCTTCACCAGTCTGAGGCACATGATCACAGGAA
                      ____________________________________________________________
consensus GTCTTCACCAGTCTGAGGCACATGATCACAGGAA
 
. : . : . : . : . : . :
JMSF047J15+ CGTGGAACAATGGCTCCACCAAGCCCTGGGCGACATGGAACAACCTTCACATTTTTGCAA
JMSF050N14+ CCTGGGCGACATGGAACAACCTTCACATTTTTGCAA
                      ____________________________________________________________
consensus CGTGGAACAATGGCTCCACCAAGCCCTGGGCGACATGGAACAACCTTCACATTTTTGCAA
 
. : . : . : . : . : . :
JMSF047J15+ TTCTTACATAACAGGGTAACATAAGTTGCCTTCGCCTTGGTCCTTGATGCAGCAATGACA
JMSF050N14+ TTCTTACATAACAGGGTAACATAAGTTGCCTTCGCCTTGGTCCTTGATGCAGCAATGACA
                      ____________________________________________________________
consensus TTCTTACATAACAGGGTAACATAAGTTGCCTTCGCCTTGGTCCTTGATGCAGCAATGACA
 
. : . : . : . : . : . :
JMSF047J15+ ATCCCAGATATCTTCACTAGTTTTGATATATATTGTGCCCCAAGGGACCGCATTGAGATT
JMSF050N14+ ATCCCAGATATCTTCACTAGTTTTGATATATATTGTGCCCCAAGGGACCGCATTGAGATT
                      ____________________________________________________________
consensus ATCCCAGATATCTTCACTAGTTTTGATATATATTGTGCCCCAAGGGACCGCATTGAGATT
 
. : . : . : . : . : . :
JMSF047J15+ GAATCCTGCTCAGATCTCAATAGTATTTGTACTTCTCCAGTCTCTGGTTCTTCCATTTCT
JMSF014M11+ TGCTCAGATCTCAATAGTATTTGTACTTCTCCAGTCTCTGGTTCTTCCATTTCT
JMSF050N14+ GAATCCTGCTCAGATCTCAATAGTATTTGTACTTCTCCAGTCTCTGGTTCTTCCATTTCT
                      ____________________________________________________________
consensus GAATCCTGCTCAGATCTCAATAGTATTTGTACTTCTCCAGTCTCTGGTTCTTCCATTTCT
 
. : . : . : . : . : . :
JMSF047J15+ CCAGTTTCTCCAGCTACTCTTGATCTCAAACTTGCCAGAACTTCAGCTGCTGCAGTTTCA
JMSF014M11+ CCAGTTTCTCCAGCTACTCTTGATCTCAAACTTGCCAGAACTTCAGCTGCTGCAGTTTCA
JMSF050N14+ CCAGTTTCTCCAGCTACTCTTGATCTCAAACTTGCCAGAACTTCAGCTGCTGCAGTTTCA
                      ____________________________________________________________
consensus CCAGTTTCTCCAGCTACTCTTGATCTCAAACTTGCCAGAACTTCAGCTGCTGCAGTTTCA
 
. : . : . : . : . : . :
JMSF047J15+ AACAGGGGAAGGTAATCGGCAGGATTCTGGCGGAGTAGTTCCGGGAGGGTTTGGTCGCGT
JMSF014M11+ AACAGGGGAAGGTAATCGGCAGGATTCTGGCGGAGTAGTTCCGGGAGGGTTTGGTCGCGT
JMSF050N14+ AACAGGGGAAGGTAATCGGCAGGATTCTGGCGGAGTAGTTCCGGGAGGGTTTGGTCGCGT
                      ____________________________________________________________
consensus AACAGGGGAAGGTAATCGGCAGGATTCTGGCGGAGTAGTTCCGGGAGGGTTTGGTCGCGT
 
. : . : . : . : . : . :
JMSF047J15+ TCATATGAAAGGAGGTCGGAAAGGTTGATGATGAGAAACTTGGAATTTTCGAGAAGAGCT
JMSF014M11+ TCATATGAAAGGAGGTCGGAAAGGTTGATGATGAGAAACTTGGAATTTTCGAGAAGAGCT
JMSF050N14+ TCATATGAAAGGAGGTCGGAAAGGTTGATGATGAGAAACTTGGAATTTTCGAGAAGAGCT
                      ____________________________________________________________
consensus TCATATGAAAGGAGGTCGGAAAGGTTGATGATGAGAAACTTGGAATTTTCGAGAAGAGCT
 
. : . : . : . : . : . :
JMSF047J15+ TCGCGATAGGGAAAGAGATTGGGCTGGCTCTTGTGAGGGAAGTTCCTGATGAACTCCTTG
JMSF014M11+ TCGCGATAGGGAAAGAGATTGGGCTGGCTCTTGTGAGGGAAGTTCCTGATGAACTCCTTG
JMSF050N14+ TCGCGATAGGGAAAGAGATTGGGCTGGCTCTTGTGAGGGAAGTTCCTGATGAACTCCTTG
                      ____________________________________________________________
consensus TCGCGATAGGGAAAGAGATTGGGCTGGCTCTTGTGAGGGAAGTTCCTGATGAACTCCTTG
 
. : . : . : . : . : . :
JMSF047J15+ AATTTCTGGAGGATTACATGGCGGCTTTTCGCAGACGGACCCCCCTGACCGGCGTCGCCG
JMSF014M11+ AATTTCTGGAGGATTACATGGCGGCTTTTCGCAGACGGACCCCCCTGACCGGCGTCGCCG
JMSF050N14+ AATTTCTGGAGGATTACATGGCGGCTTTTCGCAGACGGACCCCCCTGACCGGCGTCGCCG
                      ____________________________________________________________
consensus AATTTCTGGAGGATTACATGGCGGCTTTTCGCAGACGGACCCCCCTGACCGGCGTCGCCG
 
. : . : . : . : . : . :
JMSF047J15+ GAACCACCGCCGGGCGGGAACTGCGCTTGGTCGCTGTAGTATACGGCTCCCTCGTCCCAA
JMSF014M11+ GAACCACCGCCGGGCGGGAACTGCGCTTGGTCGCTGTAGTATACGGCTCCCTCGTCCCAA
JMSF050N14+ GAACCACCGCCGGGCGGGAACTGCGCTTGGTCGCTGTAGTATACGGCTCCCTCGTCCCAA
                      ____________________________________________________________
consensus GAACCACCGCCGGGCGGGAACTGCGCTTGGTCGCTGTAGTATACGGCTCCCTCGTCCCAA
 
. : . : . : . : . : . :
JMSF047J15+ CCCGACATTTTCTCCTTCTCTCTACAGATCTCTTGCTCTCTCACAACGCAGTCG
JMSF014M11+ CCCGACATTTTCTCCTTCTCTCTACAGATCTCTTGCTCTCTCACAACGCAGTCG
JMSF050N14+ CCCGACATTTTCTCCTTCTCTCTACAGATCTCTTGCTCTCTCACAACGCAGTCGCAGGTC
                      ____________________________________________________________
consensus CCCGACATTTTCTCCTTCTCTCTACAGATCTCTTGCTCTCTCACAACGCAGTCGCAGGTC