Contig 010932:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007H24Sequence307010932 (5)ref|XP_009601270.1|98.2PREDICTED: uncharacterized protein LOC104096590 [Nicotiana tomentosiformis]757007250 (4)ref|XP_009763074.1|3e-73PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF007O18Sequence304010932 (5)ref|XP_009601270.1|98.2PREDICTED: uncharacterized protein LOC104096590 [Nicotiana tomentosiformis]752007250 (4)ref|XP_009763074.1|6e-73PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF008H24Sequence237010932 (5)ref|XP_009601270.1|65.5PREDICTED: uncharacterized protein LOC104096590 [Nicotiana tomentosiformis]752007250 (4)ref|XP_009763074.1|2e-73PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF020K22Sequence702010932 (5)ref|XP_011086106.1|1e-40PREDICTED: trafficking protein particle complex subunit 13 [Sesamum indicum]772017134ref|XP_009763074.1|1e-75PREDICTED: trafficking protein particle complex subunit 13 isoform X1 [Nicotian
JMSF050N03Sequence696010932 (5)ref|XP_011086106.1|1e-40PREDICTED: trafficking protein particle complex subunit 13 [Sesamum indicum]752007250 (4)ref|XP_009790216.1|1e-50PREDICTED: trafficking protein particle complex subunit 13-like, partial [Nicot

Alignment

This contig is upended


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JMSF020K22+                                     CTGATCCAAATGCATTCATAGAGTGCCTAATATG
JMSF050N03+                                   AGCTGATCCAAATGCATTCATAGAGTGCCTAATATG
                      ____________________________________________________________
consensus                                     AGCTGATCCAAATGCATTCATAGAGTGCCTAATATG
 
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JMSF020K22+           TGCAACAGTTCATTGCAAAGAACAAATCAACCAATCATTCGTCAATCCACCTTGATTACA
JMSF050N03+           TGCAACAGTTCATTGCAAAGAACAAATCAACCAATCATTCGTCAATCCACCTTGATTACA
                      ____________________________________________________________
consensus             TGCAACAGTTCATTGCAAAGAACAAATCAACCAATCATTCGTCAATCCACCTTGATTACA
 
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JMSF020K22+           ATATCCCTGACTTCGAAACTCGAACTGTTGTTTATACTTATATAACTGCAGAACGTCTCC
JMSF050N03+           ATATCCCTGACTTCGAAACTCGAACTGTTGTTTATACTTATATAACTGCAGAACGTCTCC
                      ____________________________________________________________
consensus             ATATCCCTGACTTCGAAACTCGAACTGTTGTTTATACTTATATAACTGCAGAACGTCTCC
 
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JMSF020K22+           CCCAGATATATTGCCCTGCAAGGACATCTCAATTTCTCATTAATTAAAATACAAAAAACA
JMSF050N03+           CCCAGATATATTGCCCTGCAAGGACATCTCAATTTCTCATTAATTAAAATACAAAAAACA
                      ____________________________________________________________
consensus             CCCAGATATATTGCCCTGCAAGGACATCTCAATTTCTCATTAATTAAAATACAAAAAACA
 
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JMSF020K22+           CTACTAAATCAGGATAGTGTCAGGCAATGTATATGGTATAGAGAGAGCGAGGATGGAAAA
JMSF050N03+           CTACTAAATCAGGATAGTGTCAGGCAATGTATATGGTATAGAGAGAGCGAGGATGGAAAA
                      ____________________________________________________________
consensus             CTACTAAATCAGGATAGTGTCAGGCAATGTATATGGTATAGAGAGAGCGAGGATGGAAAA
 
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JMSF020K22+           CTAACCCGAAAGACTGAGGAAGGACGAGGAGGCCAGGTAGGCCGACGGATTCGGAGGACT
JMSF050N03+           CTAACCCGAAAGACTGAGGAAGGACGAGGAGGCCAGGTAGGCCGACGGATTCGGAGGACT
                      ____________________________________________________________
consensus             CTAACCCGAAAGACTGAGGAAGGACGAGGAGGCCAGGTAGGCCGACGGATTCGGAGGACT
 
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JMSF020K22+           GTTCGAGGAGGAATCTGGAGCGGTAGGAGAGATCGGAGGGGTCAACGACGTTGGGGCCGG
JMSF050N03+           GTTCGAGGAGGAATCTGGAGCGGTAGGAGAGATCGGAGGGGTCAACGACGTTGGGGCCGG
                      ____________________________________________________________
consensus             GTTCGAGGAGGAATCTGGAGCGGTAGGAGAGATCGGAGGGGTCAACGACGTTGGGGCCGG
 
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JMSF020K22+           CGTTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
JMSF007H24+             TTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
JMSF007O18+                ACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
JMSF050N03+           CGTTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
                      ____________________________________________________________
consensus             CGTTGACAGAGTCGCCGGAGAGGAGACGGGGGAGGTGATCGGCGGCGAGGGAGTCGTCGA
 
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JMSF020K22+           ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF007H24+           ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF007O18+           ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF008H24+                       CGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
JMSF050N03+           ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
                      ____________________________________________________________
consensus             ACAAGTCCTCGCCGAAAAGCAGATCGCAGGCGTTGAATCGAAGCGGGGTTTCGACGTGAA
 
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JMSF020K22+           GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF007H24+           GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF007O18+           GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF008H24+           GTGATGGCNTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
JMSF050N03+           GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
                      ____________________________________________________________
consensus             GTGATGGCCTGCAGAGCCTCATCACCCGGAAGGCAAGCGAGTGTGGAGTTTGTGTAGCGC
 
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JMSF020K22+           TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF007H24+           TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF007O18+           TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF008H24+           TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
JMSF050N03+           TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
                      ____________________________________________________________
consensus             TGCTGCTACTCATCTTCTCCAAACTCTCTCTCTGACTTCACACTCTCCCTTCACCTCAGC
 
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JMSF020K22+           TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA   
JMSF007H24+           TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA   
JMSF007O18+           TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA   
JMSF008H24+           TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGA   
JMSF050N03+           TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGACCC
                      ____________________________________________________________
consensus             TCTGATTTGGAAGCTTTTTGCCTTCGAAATGGTCGAAATGGTAATCCAACTTGCAGACCC