Contig 010927:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN039A06Sequence598010927 (5)ref|XP_009803671.1|3e-112PREDICTED: glutathione S-transferase-like [Nicotiana sylvestris]
JMSF004J09Sequence432010927 (5)ref|XP_009803671.1|2e-75PREDICTED: glutathione S-transferase-like [Nicotiana sylvestris]574010927 (5)ref|XP_004253135.1|1e-78PREDICTED: glutathione S-transferase [Solanum lycopersicum]
JMSF050E20Sequence629010927 (5)ref|XP_009803671.1|3e-115PREDICTED: glutathione S-transferase-like [Nicotiana sylvestris]685010927 (5)ref|XP_009803671.1|3e-110PREDICTED: glutathione S-transferase-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF050E20-                                                             GAGTGCATG
                      ____________________________________________________________
consensus                                                                GAGTGCATG
 
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rJMSF004J09-               ATGGGCCACAGTACAAACAAGAAAATAGTTCAAAAGATAAAACTCAGGAGCTCTG
rJMSF050E20-          GTTAGATGGGCCACAATACAAACAAGAAAATAG-TCAAAAGATAAAACTCAGGAGCTCTG
                      ____________________________________________________________
consensus             GTTAGATGGGCCACAGTACAAACAAGAAAATAGTTCAAAAGATAAAACTCAGGAGCTCTG
 
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rJMSF004J09-          TGGAGGAGGTGGTAGACTCTGCATTTCAACCACCTTCTTCCACGACTCCCGGCTTGAAAT
rJMSF050E20-          TGGAGGAGGTGGTAGACTCTGCATTTCAACCACCTTCTTCCACGACTCCCGGCTTGAAAT
                      ____________________________________________________________
consensus             TGGAGGAGGTGGTAGACTCTGCATTTCAACCACCTTCTTCCACGACTCCCGGCTTGAAAT
 
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rJMSF004J09-          CTCACTCCACCACCGCCCCACATTCTCCCTCGAAGTGAATAGGTCTCCTTTATCAGNCAC
rJMSF050E20-          CTCACTCCACCACCGCCCCACATTCTCCCTCGAAGTGAATAGGTCTCCTTTATCAGTCAC
JMFN039A06+                                                         CCTTTATCAGTCAC
JMSF050E20+                                         CGAAGTGAATAGGTCTCCTTTATCAGTCAC
                      ____________________________________________________________
consensus             CTCACTCCACCACCGCCCCACATTCTCCCTCGAAGTGAATAGGTCTCCTTTATCAGTCAC
 
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rJMSF004J09-          ACTCACCAAATACTGAATGTTCGGTAGGTGAGAGAGATCAGCCAGTGTGAACTCATCACC
rJMSF050E20-          ACTCACCAAATACTGAATGTTCGGTAGGTGAGAGAGATCAGCCAGTGTGAACTCATCACC
JMFN039A06+           ACTCACCAAATACTGAATGTTCGGTAGGTGAGAGAGATCAGCCAGTGTGAACTCATCACC
JMSF050E20+           ACTCACCAAATACTGAATGTTCGGTAGGTGAGAGAGATCAGCCAGTGTGAACTCATCACC
                      ____________________________________________________________
consensus             ACTCACCAAATACTGAATGTTCGGTAGGTGAGAGAGATCAGCCAGTGTGAACTCATCACC
 
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rJMSF004J09-          CGCCAAGTACTGGCTCTCTCCGAGCCTCTTCTCGTACACATCAAGCACTTTGCCAAGCTT
rJMSF050E20-          CGCCAAGTACTGGCTCTCTCCGAGCCTCTTCTCGTACACATCAAGCACTTTGCCAAGCTT
JMFN039A06+           CGCCAAGTACTGGCTCTCTCCGAGCCTCTTCTCGTACACATCAAGCACTTTGCCAAGCTT
JMSF050E20+           CGCCAAGTACTGGCTCTCTCCGAGCCTCTTCTCGTACACATCAAGCACTTTGCCAAGCTT
                      ____________________________________________________________
consensus             CGCCAAGTACTGGCTCTCTCCGAGCCTCTTCTCGTACACATCAAGCACTTTGCCAAGCTT
 
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rJMSF004J09-          CTCTTCGTTCTGCTTGATCAGCTTCTCATCCTGCTTCATATTCATTCGCGGTGCGAAAGC
rJMSF050E20-          CTCTTCGTTCTGCTTGATCAGCTTCTCATCCTGCTTCATATTCATTCGCGGTGCGAAAGC
JMSF004J09+                                          TGCTTCATATTCATTCGCGGTGCGAAAGC
JMFN039A06+           CTCTTCGTTCTGCTTGATCAGCTTCTCATCCTGCTTCATATTCATTCGCGGTGCGAAAGC
JMSF050E20+           CTCTTCGTTCTGCTTGATCAGCTTCTCATCCTGCTTCATATTCATTCGCGGTGCGAAAGC
                      ____________________________________________________________
consensus             CTCTTCGTTCTGCTTGATCAGCTTCTCATCCTGCTTCATATTCATTCGCGGTGCGAAAGC
 
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rJMSF004J09-          CAACTGGAATACAAGAGCCGAGCTTGGTGGATTGAAGGTTTGTGACTCTGCTTCTATCCA
rJMSF050E20-          CAACTGGAATACAAGAGCCGAGCTTGGTGGATTGAAGGTTTGTGACTCTGCTTCTATCCA
JMSF004J09+           CAACTGGAATACAAGAGCCGAGCTTGGTGGATTGAAGGTTTGTGACTCTGCTTCTATCCA
JMFN039A06+           CAACTGGAATACAAGAGCCGAGCTTGGTGGATTGAAGGTTTGTGACTCTGCTTCTATCCA
JMSF050E20+           CAACTGGAATACAAGAGCCGAGCTTGGTGGATTGAAGGTTTGTGACTCTGCTTCTATCCA
                      ____________________________________________________________
consensus             CAACTGGAATACAAGAGCCGAGCTTGGTGGATTGAAGGTTTGTGACTCTGCTTCTATCCA
 
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rJMSF004J09-          CTGCTCTATTGATGCCTTCACCAATGGGTTTGTTCCATACAGTCCCTTGCATCCTTGNTT
rJMSF050E20-          CTGCTCTATTGATGCCTTCACCAATGGGTTTGTTCCATACAGTCCCTTGCATCCTTGGTT
JMSF004J09+           CTGCTCTATTGATGCCTTCACCAATGGGTTTGTTCCATACAGTCCCTTGCATCCTTGGTT
JMFN039A06+           CTGCTCTATTGATGCCTTCACCAATGGGTTTGTTCCATACAGTCCCTTGCATCCTTGGTT
JMSF050E20+           CTGCTCTATTGATGCCTTCACCAATGGGTTTGTTCCATACAGTCCCTTGCATCCTTGGTT
                      ____________________________________________________________
consensus             CTGCTCTATTGATGCCTTCACCAATGGGTTTGTTCCATACAGTCCCTTGCATCCTTGGTT
 
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rJMSF004J09-          TGCATATTTATCGCATATGTATCGCGATATAGCTCTGGATTCGAAGAGAGTGATTTGGTC
rJMSF050E20-          TGCATATTTATCGCATATGTATCGCGATATAGCTCTGGATTCGAAGAGAGTGATTTGGTC
JMSF004J09+           TGCATATTTATCGCATATGTATCGCGATATAGCTCTGGATTCGAAGAGAGTGATTTGGTC
JMFN039A06+           TGCATATTTATCGCATATGTATCGCGATATAGCTCTGGATTCGAAGAGAGTGATTTGGTC
JMSF050E20+           TGCATATTTATCGCATATGTATCGCGATATAGCTCTGGATTCGAAGAGAGTGATTTGGTC
                      ____________________________________________________________
consensus             TGCATATTTATCGCATATGTATCGCGATATAGCTCTGGATTCGAAGAGAGTGATTTGGTC
 
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rJMSF004J09-          ATCTTGAAAATGCCGGTACTTGGCCAAAGGGCTGGATCT                     
rJMSF050E20-          ATCTTG-AAATGCCGGTACTTGGCCAAAGGGCTGGATCTTTAGGTAGTCGGTGGTCTTGT
JMSF004J09+           ATCTTG-AAATGCCGGTACTTGGCCAAAGGGCTGGATCTTTAGGTAGTCGGTGGTCTTGT
JMFN039A06+           ATCTTG-AAATGCCGGTACTTGGCCAAAGGGCTGGATCTTTAGGTAGTCGGTGGTCTTGT
JMSF050E20+           ATCTTG-AAATGCCGGTACTTGGCCAAAGGGCTGGATCTTTAGGTAGTCGGTGGTCTTGT
                      ____________________________________________________________
consensus             ATCTTG-AAATGCCGGTACTTGGCCAAAGGGCTGGATCTTTAGGTAGTCGGTGGTCTTGT
 
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rJMSF050E20-          GTTCACCTTTGGCCATGTTGACAGAGACGAGTTGAAAGTGGACATCTTTCTCAAGGAGAC
JMSF004J09+           GTTCACCTTTGGCCATGTTGACAGAGACGAGTTGAAAGTGGACATCTTTCTCAAGGAGAC
JMFN039A06+           GTTCACCTTTGGCCATGTTGACAGAGACGAGTTGAAAGTGGACATCTTTCTCAAGGAGAC
JMSF050E20+           GTTCACCTTTGGCCATGTTGACAGAGACGAGTTGAAAGTGGACATCTTTCTCAAGGAGAC
                      ____________________________________________________________
consensus             GTTCACCTTTGGCCATGTTGACAGAGACGAGTTGAAAGTGGACATCTTTCTCAAGGAGAC
 
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rJMSF050E20-          AAGCTAGAACCCTTGAGA                                          
JMSF004J09+           AAGCTAGAACCCTTGAGACCGCGGTAGAGAGAGGCGGGCCGTACACTTTGACAGGGGCCG
JMFN039A06+           AAGCTAGAACCCTTGAGACCGCGGTAGAGAGAGGCGGGCCGTACACTTTGACAGGGGCCG
JMSF050E20+           AAGCTAGAACCCTTGAGACCGCGGTAGAGAGAGGCGGGCCGTACACTTTGACAGGGGCCG
                      ____________________________________________________________
consensus             AAGCTAGAACCCTTGAGACCGCGGTAGAGAGAGGCGGGCCGTACACTTTGACAGGGGCCG
 
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JMSF004J09+           CCATTGAAGAAATGCTTACACTGCTACTCTTCTACCTGCCCTT                 
JMFN039A06+           CCATTGAAGAAATGCTTACACTGCTACTCTTCTACCTGCCCTT                 
JMSF050E20+           CCATTGAAGAAATGCTTACACTGCTACTCTTCTACCTGCCCTTGTTCTTCACATACATCC
                      ____________________________________________________________
consensus             CCATTGAAGAAATGCTTACACTGCTACTCTTCTACCTGCCCTTGTTCTTCACATACATCC