Contig 010925:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032J10Sequence580010925 (8)ref|XP_004248334.1|2e-93PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Sola596010925 (8)ref|XP_009762484.1|6e-96PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Nico
JMFF042D09Sequence643010925 (8)ref|XP_004248334.1|4e-105PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Sola631010925 (8)ref|XP_009762484.1|1e-85PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Nico
JMSF024N02Sequence631010925 (8)ref|XP_004248334.1|3e-107PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Sola695010925 (8)ref|XP_009762484.1|1e-125PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Nico
JMSF050E01Sequence637010925 (8)ref|XP_004248334.1|8e-107PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Sola692010925 (8)ref|XP_009762484.1|8e-125PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Nico

Alignment

This contig is upended


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rJMFF042D09- CCTTATGGCGGA
                      ____________________________________________________________
consensus CCTTATGGCGGA
 
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rJMFF042D09- TCACCCTGGAGAGTTTTTTTTTTTTTTTTACAAAATATTATTATTTATTTTATACTTTAA
                      ____________________________________________________________
consensus TCACCCTGGAGAGTTTTTTTTTTTTTTTTACAAAATATTATTATTTATTTTATACTTTAA
 
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rJMFF042D09- TATCATGGGACCATGCTGTATGATTTTGAATAACCTAAAAGCCAAAGGTTCAACAATAAT
rJMFF032J10- TGGGACCATGCTGTATGATTTTGAATAACCTAAAAGCCAAAGGTTCAACAATAAT
rJMSF050E01- GTATGATTTTGAATAACCTAAAAGCCAAAGGTTCAACAATAAT
rJMSF024N02- GTATGATTTTGAATAACCTAAAAGCCAAAGGTTCAACAATAAT
                      ____________________________________________________________
consensus TATCATGGGACCATGCTGTATGATTTTGAATAACCTAAAAGCCAAAGGTTCAACAATAAT
 
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rJMFF042D09- TGACAAAAGAACTACATACACTACAAAACAACAATATAATACTTCAGAAGACACAAAACC
rJMFF032J10- TGACAAAAGAACTACATACACTACAAAACAACAATATAATACTTCAGAAGACACAAAACC
rJMSF050E01- TGACAAAAGAACTACATACACTACAAAACAACAATATAATACTTCAGAAGACACAAAACC
rJMSF024N02- TGACAAAAGAACTACATACACTACAAAACAACAATATAATACTTCAGAAGACACAAAACC
                      ____________________________________________________________
consensus TGACAAAAGAACTACATACACTACAAAACAACAATATAATACTTCAGAAGACACAAAACC
 
. : . : . : . : . : . :
rJMFF042D09- AGCAATACTTCACTGTCTCTTTGGATACTCCCTTGGTCCAAATATGGTTGATCCAATTCT
rJMFF032J10- AGCAATACTTCACTGTCTCTTTGGATACTCCCTTGGTCCAAATATGGTTGATCCAATTCT
rJMSF050E01- AGCAATACTTCACTGTCTCTTTGGATACTCCCTTGGTCCAAATATGGTTGATCCAATTCT
rJMSF024N02- AGCAATACTTCACTGTCTCTTTGGATACTCCCTTGGTCCAAATATGGTTGATCCAATTCT
                      ____________________________________________________________
consensus AGCAATACTTCACTGTCTCTTTGGATACTCCCTTGGTCCAAATATGGTTGATCCAATTCT
 
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rJMFF042D09- GACATTGGTGCTGCCCATTTCTATCGCTTGCTCAAAGTCCCCAGACATGCCCATTGACAG
rJMFF032J10- GACATTGGTGCTGCCCATTTCTATCGCTTGCTCAAAGTCCCCAGACATGCCCATTGACAG
rJMSF050E01- GACATTGGTGCTGCCCATTTCTATCGCTTGCTCAAAGTCCCCAGACATGCCCATTGACAG
rJMSF024N02- GACATTGGTGCTGCCCATTTCTATCGCTTGCTCAAAGTCCCCAGACATGCCCATTGACAG
                      ____________________________________________________________
consensus GACATTGGTGCTGCCCATTTCTATCGCTTGCTCAAAGTCCCCAGACATGCCCATTGACAG
 
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rJMFF042D09- CTCACATTGGGCCTCTGTCATCCCAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
rJMFF032J10- CTCACATTGGGCCTCTGTCATCCCAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
rJMSF050E01- CTCACATTGGGCCTCTGTCATCCCAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
rJMSF024N02- CTCACATTGGGCCTCTGTCATCCCAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
JMSF024N02+ CCAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
JMFF042D09+ GTCATCCCAAGCACTTGNCAAACCTCAGTTCTACAATTCCATAG
JMSF050E01+ CAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
                      ____________________________________________________________
consensus CTCACATTGGGCCTCTGTCATCCCAAGCACTTTGCAAACCTCAGTTCTACAATTCCATAG
 
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rJMFF042D09- CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
rJMFF032J10- CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
rJMSF050E01- CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
rJMSF024N02- CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
JMSF024N02+ CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
JMFF042D09+ CATCTGNAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
JMFF032J10+ GTTGATGTATAGTCTGGTCTTCCAATNGTCATTAAGCCAGA
JMSF050E01+ CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
                      ____________________________________________________________
consensus CATCTTGAAGTTTTCTGGAGTTGATGTATAGTCTGGTCTTCCAATTGTCATTAAGCCAGA
 
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rJMFF042D09- GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
rJMFF032J10- GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
rJMSF050E01- GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
rJMSF024N02- GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
JMSF024N02+ GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
JMFF042D09+ GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
JMFF032J10+ GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
JMSF050E01+ GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
                      ____________________________________________________________
consensus GAACTCAAGATTTGGGCAATTCAGCTTGACATGCTTAGCAAGTTCTATAGAATATGATGG
 
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rJMFF042D09- ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCNAAACCTTTAAGGG
rJMFF032J10- ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
rJMSF050E01- ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
rJMSF024N02- ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
JMSF024N02+ ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
JMFF042D09+ ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
JMFF032J10+ ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
JMSF050E01+ ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
                      ____________________________________________________________
consensus ATCTACCCCAGATTTTGACTCTTCTCCACTGGTATTCACTTGGACCAAAACCTTTAAGGG
 
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rJMFF042D09- CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
rJMFF032J10- CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
rJMSF050E01- CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
rJMSF024N02- CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
JMSF024N02+ CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
JMFF042D09+ CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
JMFF032J10+ CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
JMSF050E01+ CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
                      ____________________________________________________________
consensus CTGTCGGCCAATGCTTGAAATTGCACGATCAAGATGATTTGCAACCTTTTCATTATCTAC
 
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rJMFF042D09- ACCCTGTACCATGGCTAAA
rJMFF032J10- ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
rJMSF050E01- ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
rJMSF024N02- ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
JMSF024N02+ ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
JMFF042D09+ ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
JMFF032J10+ ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
JMSF050E01+ ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
                      ____________________________________________________________
consensus ACCCTGTACCATGGCTAAATTGGGAACAGCAGTTAGCAGTGATTTTACTTTATTGCTCTG
 
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rJMFF032J10- C
rJMSF050E01- CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
rJMSF024N02- CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
JMSF024N02+ CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
JMFF042D09+ CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
JMFF032J10+ CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
JMSF050E01+ CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
                      ____________________________________________________________
consensus CAAATGCCCAATAAAATGCCACTCGATATCCCCAGGAAGCTCAGGAGCCTTTTGGATAAT
 
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rJMSF050E01- CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATCGTATACC
rJMSF024N02- CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATCGTATACCTGG
JMSF024N02+ CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATCGTATACCTGGCGGATGAG
JMFF042D09+ CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATCGTATACCTGGCGGATGAG
JMFF032J10+ CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATCGTATACCTGGCGGATGAG
JMSF050E01+ CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATNGTATACCTGGCGGATGAG
                      ____________________________________________________________
consensus CTCTTGAACATAGTTCTCACCGAAACAGGTATGCCCAGCATCGTATACCTGGCGGATGAG
 
. : . : . : . : . : . :
JMSF024N02+ AGAGGCGGGCTTCGTCTTGCCCACCGCCACTACTCTCACGTCATCGGCACGGCGGCCTGA
JMFF042D09+ AGAGGCGGGCTTCGTCTTGCCCACCGCCACTACTCTCACGTCATCGGCACGGCGGCCTGA
JMFF032J10+ AGAGGCGGGCTTCGTCTTGCCCACCGCCACTACTCTCACGTCATCGGCACGGCGGCCTGA
JMSF050E01+ AGAGGCGGGCTTCGTCTTGCCCACCGCCACTACTCTCACGTCATCGGCACGGCGGCCTGA
                      ____________________________________________________________
consensus AGAGGCGGGCTTCGTCTTGCCCACCGCCACTACTCTCACGTCATCGGCACGGCGGCCTGA
 
. : . : . : . : . : . :
JMSF024N02+ CCTCTCCGCGGCAAGGCGGACACGATGGAGCACCGCCCGTAGCGCGGTGGCAGCTGCATT
JMFF042D09+ CCTCTCCGCGGCAAGGCGGACACGATGGAGCACCGCCCGTAGCGCGGTGGCAGCTGCATT
JMFF032J10+ CCTCTCCGCGGCAAGGCGGACACGATGGAGCACCGCCCGTAGCGCGGTGGCAGCTGCATT
JMSF050E01+ CCTCTCCGCGGCAAGGCGGACACGATGGAGCACCGCCCGTAGCGCGGTGGCAGCTGCATT
                      ____________________________________________________________
consensus CCTCTCCGCGGCAAGGCGGACACGATGGAGCACCGCCCGTAGCGCGGTGGCAGCTGCATT
 
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JMSF024N02+ CTCCACAGCCGGAGCAGCCATTAACTACCGTTCTCTGTGTTGTCTGTGCCCT
JMFF042D09+ CTCCACAGCCGGAGCAGCCATTAACTACCGTTCTCTGTGTTGTCTGTGCCCT
JMFF032J10+ CTCCACAGCCGGAGCAGCCATTAACTACCGTTCTCTGTGTTGTCTGTGCCCT
JMSF050E01+ CTCCACAGCCGGAGCAGCCATTAACTACCGTTCTCTGTGTTGTCTGTGCCCTGAATCCTC
                      ____________________________________________________________
consensus CTCCACAGCCGGAGCAGCCATTAACTACCGTTCTCTGTGTTGTCTGTGCCCTGAATCCTC