Contig 010921:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017M17Sequence564010921 (5)emb|CDP09371.1|5e-103unnamed protein product [Coffea canephora]783005392 (2)ref|XP_006354632.1|8e-65PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]
JMFF022F02Sequence555010921 (5)ref|XP_002302482.2|2e-70hypothetical protein POPTR_0002s13620g [Populus trichocarpa] gb|EEE81755.2| hypo751009033 (3)ref|XP_006354632.1|1e-97PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]
JMFS126D06Sequence626010921 (5)gb|EYU42313.1|1e-71hypothetical protein MIMGU_mgv1a002842mg [Erythranthe guttata]
JMSF036L16Sequence691010921 (5)emb|CDP09371.1|1e-151unnamed protein product [Coffea canephora]708021537ref|XP_009626779.1|5e-106PREDICTED: dynamin-related protein 1E-like [Nicotiana tomentosiformis]
JMSF049P19Sequence431010921 (5)emb|CDP09371.1|5e-15unnamed protein product [Coffea canephora]733005392 (2)ref|XP_011093474.1|1e-95PREDICTED: dynamin-related protein 1E-like [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+                                                               AGACTCCA
                      ____________________________________________________________
consensus                                                                 AGACTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           AGTGCATTGAGAGAAGCTTTGCCAGATACTCCGAACCCATTTTACTGGCAAGGTGACTGT
                      ____________________________________________________________
consensus             AGTGCATTGAGAGAAGCTTTGCCAGATACTCCGAACCCATTTTACTGGCAAGGTGACTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           AGTCGGGGCTTGTAGCGAAATACTCACGCTCCCTTCTTCGTGCAGCAAGCATGTCGACAT
                      ____________________________________________________________
consensus             AGTCGGGGCTTGTAGCGAAATACTCACGCTCCCTTCTTCGTGCAGCAAGCATGTCGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           TTTTGTTGATGTCAGCTTGTGAACGGTTAACAATACCCACCCAAGGTTGTTGCAACCGGT
                      ____________________________________________________________
consensus             TTTTGTTGATGTCAGCTTGTGAACGGTTAACAATACCCACCCAAGGTTGTTGCAACCGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           ACGATCTTCCTTCAAGAACATCCAATGCATTAGTTCCTTTATCCATCAAATCTAGCTTCG
                      ____________________________________________________________
consensus             ACGATCTTCCTTCAAGAACATCCAATGCATTAGTTCCTTTATCCATCAAATCTAGCTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           TAAGGACCCCAAATGTACGCTCGCCTGCGGGATCTACTTCCCTTGAAAGTTTAATTGCAT
                      ____________________________________________________________
consensus             TAAGGACCCCAAATGTACGCTCGCCTGCGGGATCTACTTCCCTTGAAAGTTTAATTGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           CTGATGTGGCAATATCCTGATTGGCTGGAGATATCGCAAGTATGATGCAGTTGGGTTTCT
JMFF017M17+                                     GGAGATATTGCTAGTATAATGCAGTTGGGCTTCC
                      ____________________________________________________________
consensus             CTGATGTGGCAATATCCTGATTGGCTGGAGATATTGCTAGTATGATGCAGTTGGGTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           CCACATAGGATCGGACCATGTCTTCAATGTCTTTGACTACACTTTCAGGTTGCCCCTCAA
JMFF017M17+           CAACATAGGTTCGGACCATGTTTTCAATATCTTCAACTATACTTTCAGGTTGCCCCTCAA
                      ____________________________________________________________
consensus             CCACATAGGTTCGGACCATGTTTTCAATGTCTTTGACTATACTTTCAGGTTGCCCCTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           CAGCAACTTTTGTCAAACCGGGCAAATCAATTAGCGTGAGGTTGACGACATTGGGGGAAT
JMFF017M17+           CAGCAACTTTTGTCAAACCAGGCAAATCAATCAGTGTTAAGTTGACCACATTGGGGGAGT
JMFS126D06+                                                          ACATTGGGGGAAT
                      ____________________________________________________________
consensus             CAGCAACTTTTGTCAAACCGGGCAAATCAATTAGTGTTAGGTTGACGACATTGGGGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           AGATGCTGAGGTGAATAGGAACTGGAGATATTTGTTTGGTTTTTCCCGTGATTCTGTCAG
JMFF017M17+           AGATGCTGAGGTGGATGGGAACAGGAGAAATTTGTTTTGATTTTCCAGTGATTCTATCAG
JMFS126D06+           AGATGCTGAGGTGAATAGGAACTGGAGATATTTGTTTGGTTTTTCCCGTGATTCTGTCAG
JMFF022F02+             ATGCTGAGGTGGATGGGAACAGGAGAAATCTGTTTTGTTTTCCCTGTTAGTCTATCAG
                      ____________________________________________________________
consensus             AGATGCTGAGGTGGATGGGAACTGGAGATATTTGTTTTGTTTTTCCCGTGATTCTGTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           TTTCATCCTGAATTTCCTTGCGAACCAGAGAGAAATCAGTGAAACGCCTTCGTGGCAAAT
JMFF017M17+           TTTCATCCTGAATTTCCTTGCGTACCAGAGCGAAGTCTGTGAATCTTTTTCGTGGCAAGT
JMFS126D06+           TTTCATCCTGAATTTCCTTGCGAACCAGAGAGAAATCAGTGAAACGCCTTCGTGGCAAAT
JMFF022F02+           TTTCATCCTGAATTTCTTTGCGAACTAGGGAGAAATCACTGAACCGTCTTCTTGGTAAAT
                      ____________________________________________________________
consensus             TTTCATCCTGAATTTCCTTGCGAACCAGAGAGAAATCAGTGAAACGTCTTCGTGGCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           GACCGAATTCTGCATATTCCTCCTGCCCTTCATCAATCTTCTGCAGCTGCAACACCAATG
JMFF017M17+           GAGCAAACTCTGCATATTCCGGCTGCCCAGCATCTGTCTTGTGCAACTGCAATACCAATG
JMFS126D06+           GACCGAATTCTGCATATTCCTCCTGCCCTTCATCAATCTTCTGCAGCTGCAACACCAATG
JMFF022F02+           GAGCGAATTCTGCATACTCCTCCTGCCCATCGTTTGTCTTGTGCAACTGTAACACCAAAG
                      ____________________________________________________________
consensus             GAGCGAATTCTGCATATTCCTCCTGCCCTTCATCTGTCTTGTGCAGCTGCAACACCAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036L16+           GCCGTCTTGTAACAATCCCAGAT                                     
JMFF017M17+           GCCGCCTTGTGACAATCCCAGATCCTCGAGGAAGAAAATCTCTCCCAACTACGCTTTCCA
JMFS126D06+           GCCGTCTTGTAACAATCCCAGATCCTCGAGGAAGAAAATCTCTCCCAACTATGCTTTCCA
JMFF022F02+           GCCGCCTCGTAACAATCCCGGACCCTCGGGGAAGAAAATCCCGTCCAACTACGCTTTCCA
JMSF049P19+                                                               GCTTTCCA
                      ____________________________________________________________
consensus             GCCGTCTTGTAACAATCCCAGATCCTCGAGGAAGAAAATCTCTCCCAACTACGCTTTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF017M17+           ACACCGATGATTTTCCAGAACTCTGACCACCGACGACGGCGACGGAGGGAAGAGCGTCCC
JMFS126D06+           ACACAGAAGATTTTCCAGAACTCTGACCGCCAACGACGGCGACGGAGGGCAGAGCATCCC
JMFF022F02+           GCACAGAAGATTTTCCAGAACTCTGACCGCCGACGACGGCGACGGACGGAAGTGCGTCCC
JMSF049P19+           ACNCCGATGATTTTCCAGAACTNTGACCNCCGACGACGGCGACGGAGGGAAGAGCGTCCC
                      ____________________________________________________________
consensus             ACACCGATGATTTTCCAGAACTCTGACCGCCGACGACGGCGACGGAGGGAAGAGCGTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF017M17+           AGAGAGAAGAGAAAGCGTTGTCACCCCCACCGTAGTCGCCGAGAGCCGTACAAGCTCTCT
JMFS126D06+           AAAGAGAAGAGAAAGCGTTGTCGCCGCCGCCGTGGTCGCCGAGAGCAGTACAGGCTCTCT
JMFF022F02+           AGAGAGAAGAGAAAGAGTTGTCGTCGCCACCGTAGTCGCCGAGAGCAGTACAAGCTCTCT
JMSF049P19+           AGAGAGAAGAGAAAGCGTTGTCNCCCCCNCCGTAGTCGCCGAGAGCCGTACAAGCTCTNT
                      ____________________________________________________________
consensus             AGAGAGAAGAGAAAGCGTTGTCGCCGCCACCGTAGTCGCCGAGAGCCGTACAAGCTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF017M17+           GAAT                                                        
JMFS126D06+           GAAT                                                        
JMFF022F02+           GAATACGATTTACCAAACCTATCAAGCTCTCCATCGTCG                     
JMSF049P19+           GAATCCGATTCACCAAACCGATCAAGCTNTCCATTGTCGACATNTTCTCACCCTCACAAA
                      ____________________________________________________________
consensus             GAATCCGATTTACCAAACCTATCAAGCTCTCCATTGTCGACATNTTCTCACCCTCACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049P19+           AACNCTAATGCCTAACCAGATNTGATGCTCAGCTCCAAAAATTCNCNCAAATTTTTGGAG
                      ____________________________________________________________
consensus             AACNCTAATGCCTAACCAGATNTGATGCTCAGCTCCAAAAATTCNCNCAAATTTTTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049P19+           GAAAAAAAAAATCTGAAAATAATAATTTAGGCAATGAAGATCTGAAGGTGGAAAGACGAG
                      ____________________________________________________________
consensus             GAAAAAAAAAATCTGAAAATAATAATTTAGGCAATGAAGATCTGAAGGTGGAAAGACGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049P19+           GGAAAGGTTTTGAAGTTGGCGACTTTGTGGACTTGGATTGAATGCGAAGTGAAAAAACGA
                      ____________________________________________________________
consensus             GGAAAGGTTTTGAAGTTGGCGACTTTGTGGACTTGGATTGAATGCGAAGTGAAAAAACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049P19+           TGTTTTAGGGAGACAAAACTCTGAGCTTGTTGGACTGTTTTTGTTCAAATTTCAATTCAA
                      ____________________________________________________________
consensus             TGTTTTAGGGAGACAAAACTCTGAGCTTGTTGGACTGTTTTTGTTCAAATTTCAATTCAA