Contig 010919:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS016F05Sequence547010919 (7)gb|AAL91978.1|AF483209_15e-33putative trehalose synthase [Solanum tuberosum]
JMFS035D06Sequence627010919 (7)ref|XP_004243268.1|4e-76PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [S
JMFS075D04Sequence627010919 (7)ref|XP_006364095.1|8e-130PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-li
JMFS079A09Sequence625010919 (7)ref|XP_004243268.1|7e-108PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [S
JMFS138E01Sequence621010919 (7)ref|XP_004243268.1|6e-33PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [S
JMSF021H05Sequence617010919 (7)ref|XP_009628927.1|6e-39PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [N755008512 (2)
JMSF049K08Sequence663010919 (7)ref|XP_006348895.1|4e-40PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-li827008512 (2)ref|XP_006348895.1|5e-25PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-li

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+                                         TACCGTCCTCCCATAGTACTCCAGCCCAAT
                      ____________________________________________________________
consensus                                           TACCGTCCTCCCATAGTACTCCAGCCCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           ATAACCCCTTTTTGACTGGTACTCTAAGCCTAACATCCGACTGCAGCAAGAGAGGAAATG
                      ____________________________________________________________
consensus             ATAACCCCTTTTTGACTGGTACTCTAAGCCTAACATCCGACTGCAGCAAGAGAGGAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           TCGTGCATAATCAAAAGTGTGGAAACCAACAAGGTCAGAGCAAAGCAGAGCCTTGAGAAT
                      ____________________________________________________________
consensus             TCGTGCATAATCAAAAGTGTGGAAACCAACAAGGTCAGAGCAAAGCAGAGCCTTGAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           TTCTTCTCTGACAGGAAGTGTCCTGTAAATCTCGGAAGAAGGAAATGGGCTATGAAGGAA
                      ____________________________________________________________
consensus             TTCTTCTCTGACAGGAAGTGTCCTGTAAATCTCGGAAGAAGGAAATGGGCTATGAAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           GAAACCCATTCTGAGTCGGTTGAATCGCCTCCTCAAGAATGTGGGCAACACCATCAAATG
                      ____________________________________________________________
consensus             GAAACCCATTCTGAGTCGGTTGAATCGCCTCCTCAAGAATGTGGGCAACACCATCAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           ATAATCATGAATCCAAACAAAATCATCCTCGGGATTAAGAACTTCAATCACTTTTTGTGA
JMFS079A09+                                ATCATCCTCGGGATTAAGAACTTCAATCACTTTTTGTGA
                      ____________________________________________________________
consensus             ATAATCATGAATCCAAACAAAATCATCCTCGGGATTAAGAACTTCAATCACTTTTTGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           AAAAATCTTATTCGCAGACACATATGCTTCCCACATAGACCGATCAAAGCGGCCTCCATG
JMFS079A09+           AAAAATCTTATTCGCAGACACATATGCTTCCCACATAGACCGATCAAAGCGGCCTCCATG
                      ____________________________________________________________
consensus             AAAAATCTTATTCGCAGACACATATGCTTCCCACATAGACCGATCAAAGCGGCCTCCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           ATCAGGTGAAAACGGCAACATGTAGTGAAAAAGCGGCCACAAATGTTTCTTGCAGAATCC
JMFS079A09+           ATCAGGTGAAAACGGCAACATGTAGTGAAAAAGCGGCCACAAATGTTTCTTGCAGAATCC
JMFS035D06+                       CGGCAACATGTAGTGAAAAAGCGGCCACAAATGTTTCTGNCAGAATCC
                      ____________________________________________________________
consensus             ATCAGGTGAAAACGGCAACATGTAGTGAAAAAGCGGCCACAAATGTTTCTTGCAGAATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           TTCATAATACTTCTCCATTAAACTCGGGGGAAGGAAAGTAGGAACACACTGGAATTTTTC
JMFS079A09+           TTCATAATACTTCTCCATTAAACTCGGGGGAAGGAAAGTAGGAACACACTGGAATTTTTC
JMFS035D06+           TTCATAATACTTCTCCATTAAACTCGGGGGAAGGAAAGTAGGAACACACTGGAATTTTTC
                      ____________________________________________________________
consensus             TTCATAATACTTCTCCATTAAACTCGGGGGAAGGAAAGTAGGAACACACTGGAATTTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           CAAAAGATAGCTGGAAACGTCATCCTGTTCAATTGGGTCAACATCAACACACAAAGATCC
JMFS079A09+           CAAAAGATAGCTGGAAACGTCATCCTGTTCAATTGGGTCAACATCAACACACAAAGATCC
JMFS035D06+           CAAAAGATAGCTGGAAACGTAATCCTGTTCAATTGGGTCAACATCAACACACAAAGATCC
JMSF049K08+                                                                    TCC
                      ____________________________________________________________
consensus             CAAAAGATAGCTGGAAACGTCATCCTGTTCAATTGGGTCAACATCAACACACAAAGATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS075D04+           AACATATTGCACTTCCATTTCTTCCGGTAAACCATCCTTAAGTCGGAATAGTATCGA   
JMFS079A09+           AACATATTGCACTTCCATTTCTTCCGGTAAACCATCCTTAAGTCGGAATAGTATCGAGTC
JMFS035D06+           AACATATTGCACTTCCATTTCTTCCGGTAAACCATCCTTAAGTCGGAATAGTATCGAGTC
JMFS138E01+                                                TTAAGTCGGAATAGTATCGAGTC
JMSF021H05+                              TCTTCCGGTAAACCATCCTTAAGTCGGAATAGTATCGAGTC
JMFS016F05+                                               CTTAAGTCGGAATAGTATCGAGTC
JMSF049K08+           AACATATTGCACTTCCATTTCTTCCGGTAAACCATCCTTAAGTCGGAATAGTATCGAGTC
                      ____________________________________________________________
consensus             AACATATTGCACTTCCATTTCTTCCGGTAAACCATCCTTAAGTCGGAATAGTATCGAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS079A09+           CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTCTTCGTTTTGCTTTCAAGGGCAA
JMFS035D06+           CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTCTTCGTTTTGCTTTCAAGGGCAA
JMFS138E01+           CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTCTTCGTTTTGCTTTCAAGGGCAA
JMSF021H05+           CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTNTTCGTTTTGCTTTCAAGGGCAA
JMFS016F05+           CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTCTTCGTTTTGCTTTCAAGGGCAA
JMSF049K08+           CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTCTTCGTTTTGCTTTCAAGGGCAA
                      ____________________________________________________________
consensus             CTCATTCCAACTAAAGCTCCACCCTTCATTATCTGGTCTTCGTTTTGCTTTCAAGGGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS079A09+           CTGATTAGCGACAATAATCATCCTATCACAGACTAGTGAAGACTGATTATCAGAAGCAAC
JMFS035D06+           CTGATTAGCGACAATAATCATCCTATCACAGACTAGTGAAGACTGATTATCAGAAGCAAC
JMFS138E01+           CTGATTAGCGACAATAATCATCCTATCACAGACTAGTGAAGACTGATTATCAGAAGCAAC
JMSF021H05+           NTGNTTAGCGACAATANTCATCCTATCACAGANTAGTGAAGACTGATTATCAGAAGCAAC
JMFS016F05+           CTGATTAGCGACAATAATCATCCTATCACAGACTAGTGAAGACTGATTATCAGAAGCAAC
JMSF049K08+           CTGATTAGCGACAATAATCATCCTATCACAGACTAGTGAAGACTGATTATCAGAAGCAAC
                      ____________________________________________________________
consensus             CTGATTAGCGACAATAATCATCCTATCACAGACTAGTGAAGACTGATTATCAGAAGCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS079A09+           ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
JMFS035D06+           ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
JMFS138E01+           ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
JMSF021H05+           ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
JMFS016F05+           ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
JMSF049K08+           ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
                      ____________________________________________________________
consensus             ACTATTAGTCTGTTCATCTTCAAACTCGCATATACTACCTGGCACCGTCATTACCCTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS079A09+           CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTCTGGAAAATTTCCAGCTGCCAA
JMFS035D06+           CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTCTGGAAAATTTCCAGCTGCCAA
JMFS138E01+           CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTCTGGAAAATTTCCAGCTGCCAA
JMSF021H05+           CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTNTGGAAAATTTCCAGCTGCCAA
JMFS016F05+           CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTCTGGAAAATTTCCAGCTGCCAA
JMSF049K08+           CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTCTGGAAAATTTCCAGCTGCCAA
                      ____________________________________________________________
consensus             CATCGGCAGCCTTCTTCGCTCCCTCTCCCTCCCCATTTCTGGAAAATTTCCAGCTGCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS079A09+           ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATA              
JMFS035D06+           ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATACTAGGAGTGTCTCC
JMFS138E01+           ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATACTAGGAGTGTCTCC
JMSF021H05+           ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATACTAGGAGTGTCTCC
JMFS016F05+           ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATACTAGGAATGTCTCC
JMSF049K08+           ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATACTAGGAGTGTCTCC
                      ____________________________________________________________
consensus             ATCTAAAAGGTTTGTATACGATCTTGACATCATCTTTACGAAGATACTAGGAGTGTCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS035D06+           TCAACTTCACCAAGTAAGCAGACAACGTCAGCACCCAAAATTCACTATTGTCTCCGCAAT
JMFS138E01+           TCAACTTCACCAAGTAAGCAGACAACGTCAGCACCCAAAATTCACTATTGTCTCCGCAAT
JMSF021H05+           TCAACTTCACCAAGTAAGCAGACAACGTCAGCACCCAAAATTCACTATNGTCTCCGCAAT
JMFS016F05+           TCAACTTCACCAAGTAAGCAGACAACGTCAGCACCCAAAATTCACTATTGTCTCCGCAAT
JMSF049K08+           TCAACTTCACCAAGTAAGCAGACAACGTCAGCACCCAAAATTCACTATTGTCTCCGCAAT
                      ____________________________________________________________
consensus             TCAACTTCACCAAGTAAGCAGACAACGTCAGCACCCAAAATTCACTATTGTCTCCGCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS035D06+           ATTCTCAATTTCCGAAAGACTCAAGCTTTAGAGTTAAAT                     
JMFS138E01+           ATTCTCAATTTCCGAAAGACTCAAGCTTTAGAGTTAAATTGGATGGATTTCACACGCCGG
JMSF021H05+           ATTCTCAATTTCCGAAAGACTCAAGCTTTAGAGTTAAATTGGATGGATTTCACACGCCGG
JMFS016F05+           ATTCTCAATTTCCGAAAGACTCAAGCTTTAGAGTTAAATTGGATGGATTTCACACGCCGG
JMSF049K08+           ATTCTCAATTTCCGAAAGACTCAAGCTTTAGAGTTAAATTGGATGGATTTCACACGCCGG
                      ____________________________________________________________
consensus             ATTCTCAATTTCCGAAAGACTCAAGCTTTAGAGTTAAATTGGATGGATTTCACACGCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS138E01+           AAGGAGACTTGAGAATCAAAACAATTGGAAATTGAGAAATACTTGTTGTGGTCCAGTCGA
JMSF021H05+           AAGGAGACTTGAGAATCAAAACAATTGGAAATTGAGAAATACTTGTTGTGGTCCAGTCGA
JMFS016F05+           AAGGAGACTTGAGAATCAAAACAATTGGAAATTGAGAAATACTTGTTGTGGTCCAGTCGA
JMSF049K08+           AAGGAGACTTGAGAATCAAAACAATTGGAAATTGAGAAATACTTGTTGTGGTCCAGTCGA
                      ____________________________________________________________
consensus             AAGGAGACTTGAGAATCAAAACAATTGGAAATTGAGAAATACTTGTTGTGGTCCAGTCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS138E01+           TATAGCATAGATTCCAAATCTTCTTGAGTGATAGTCTCGATCTCTGGTGCTAAATTGAAT
JMSF021H05+           TATAGCATAGATTCCAAATCTTCCTGAGTGATAGTCTCGATCTCTGGTGCTAAATTGAAT
JMFS016F05+           TATAGCATAGATTCCAAATCTTCTTGAGTGATAGTCTCGATCT                 
JMSF049K08+           TATAGCATAGATTCCAAATCTTCTTGAGTGATAGTCTCGATCTCTGGTGCTAAATTGAAT
                      ____________________________________________________________
consensus             TATAGCATAGATTCCAAATCTTCTTGAGTGATAGTCTCGATCTCTGGTGCTAAATTGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS138E01+           GGATTTCTAGGGTTGGAAAAGAAACCAGGAAATCTAGAGTACTTCCTCTTTTTATCAA  
JMSF021H05+           GGATTTCTAGGGTTGGAAAAGAAACCAGGAAATC                          
JMSF049K08+           GGATTTCTAGGGTTGGAAAAGAAACCAGGAAATCTAGAGTACTTCCTCTTTTTATCAACC
                      ____________________________________________________________
consensus             GGATTTCTAGGGTTGGAAAAGAAACCAGGAAATCTAGAGTACTTCCTCTTTTTATCAACC