Contig 010917:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF049E03-                               ACCCTGGAGAGTTTTTTTTTTTTTTTCTTTAAAAATGTC
rJMSF049I22-                                                               AAATGTC
                      ____________________________________________________________
consensus                                  ACCCTGGAGAGTTTTTTTTTTTTTTTCTTTAAAAATGTC
 
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rJMFF049E03-          TGTCTATTCATTTTCTTTTCTCAGTGCAAATACAGCATAAAACCAGATATAAAGTAGAAC
rJMSF049I22-          TGTCTATTCATTTTCTTTTCTCAGTGCAAATACAGCATAAAACCAGATATAAATTAGAAC
                      ____________________________________________________________
consensus             TGTCTATTCATTTTCTTTTCTCAGTGCAAATACAGCATAAAACCAGATATAAATTAGAAC
 
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rJMFF049E03-          AACAATATAACTAATTACTCAGGAATGCAATTGTTGAGAAGTAAGCCATTCTTTTGCTGC
rJMSF049I22-          AACAATATAACTAATTACTCAGGAATGCAATTGTTGAGAAGTAAGCCATTCTTTTGCTGC
                      ____________________________________________________________
consensus             AACAATATAACTAATTACTCAGGAATGCAATTGTTGAGAAGTAAGCCATTCTTTTGCTGC
 
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rJMFF049E03-          TACCAGATCAGGCAGCACTATGGCTCCAGATTTCTTCCAATTTTCAGCATCAGCTGTCTT
rJMSF049I22-          TACCAGATCAGGCAGCACTATGGCTCCAGATTTCTTCCAATTTTCAGCATCAGCTGTCTT
                      ____________________________________________________________
consensus             TACCAGATCAGGCAGCACTATGGCTCCAGATTTCTTCCAATTTTCAGCATCAGCTGTCTT
 
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rJMFF049E03-          GAACCTGTCAAGCAATATTGCATGCATCCCCACACTCGTACCCGGTACGAAATCTTTTCG
rJMSF049I22-          GAACCTGTCAAGCAATATTGCATGCATCCCCACACTCGTAGCCGGTACGAAATCTTTTCG
                      ____________________________________________________________
consensus             GAACCTGTCAAGCAATATTGCATGCATCCCCACACTCGTAGCCGGTACGAAATCTTTTCG
 
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rJMFF049E03-          CATGCTGTCCCCGATGTGCAGAACTTCTTCGGGCGCGACGTTTCCAGCTCTCTCCAACGC
rJMSF049I22-          CATGCTGTCCCCGATGTGCAGAACTTCTTCGGGCGCGACGTTTCCAGCTCTCTCCAACGC
                      ____________________________________________________________
consensus             CATGCTGTCCCCGATGTGCAGAACTTCTTCGGGCGCGACGTTTCCAGCTCTCTCCAACGC
 
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rJMFF049E03-          AATCCGATAGATCTTCGGGTCTGGCT                                  
rJMSF049I22-          AATCCGATAGATCTTCGGGTCTGGCTTTTCTACACCTTCTAGCCCAGAGAATACGCCAAA
                      ____________________________________________________________
consensus             AATCCGATAGATCTTCGGGTCTGGCTTTTCTACACCTTCTAGCCCAGAGAATACGCCAAA
 
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rJMSF049I22-          ATCCCACTCCGATCCCTGATTCAAACCGAGCGCTGGGAGGATTACATCTTGATACCGATA
JMSF049I22+                         CCTGATTCAAACCGAGCGCTGGGAGGATTACATCTTGATACCGATA
                      ____________________________________________________________
consensus             ATCCCACTCCGATCCCTGATTCAAACCGAGCGCTGGGAGGATTACATCTTGATACCGATA
 
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rJMSF049I22-          CTCAGCGTTGCTGACAAGCCCGACTGTAACCCCTGTAGAACGAAGCCACCTTAGGAACGG
JMSF049I22+           CTCAGCGTTGCTGACAAGCCCGACTGTAACCCCTGTAGAACGAAGCCACCTTAGGAACGG
                      ____________________________________________________________
consensus             CTCAGCGTTGCTGACAAGCCCGACTGTAACCCCTGTAGAACGAAGCCACCTTAGGAACGG
 
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rJMSF049I22-          TTGGGCATCTGGGAAAATAGTGTACGGTGCAGAGGAACCAAACGTTGCATATATGCGTCT
JMSF049I22+           TTGGGCATCTGGGAAAATAGTGTACGGTGCAGAGGAACCAAACGTTGCATATATGCGTCT
                      ____________________________________________________________
consensus             TTGGGCATCTGGGAAAATAGTGTACGGTGCAGAGGAACCAAACGTTGCATATATGCGTCT
 
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rJMSF049I22-          AAAGATCTTTTCAAAAGTCTCCTCGTCATAATCATATCCAGCCTTCACAAATGAATCTCG
JMFF049E03+                                          TCATATCCAGCCTTCACAAATGAATCTCG
JMSF049I22+           AAAGATCTTTTCAAAAGTCTCCTCGTCATAATCATATCCAGCCTTCACAAATGAATCTCG
                      ____________________________________________________________
consensus             AAAGATCTTTTCAAAAGTCTCCTCGTCATAATCATATCCAGCCTTCACAAATGAATCTCG
 
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rJMSF049I22-          CACACAAGTCTTCCACCAGATAATGTTCGGGATCTTTTCTGCAAACCCGAAGCATGGATG
JMFF049E03+           CACACAAGTCTTCCACCAGATAATGTTCGGGATCTTTTCTGCAAACCCGAAGCATGGATG
JMSF049I22+           CACACAAGTCTTCCACCAGATAATGTTCGGGATCTTTTCTGCAAACCCGAAGCATGGATG
                      ____________________________________________________________
consensus             CACACAAGTCTTCCACCAGATAATGTTCGGGATCTTTTCTGCAAACCCGAAGCATGGATG
 
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rJMSF049I22-          TTTTCTTGCCATGTCTGTATAAGCGAGTTTAAAGCCCTCGTGCACTCTTTTG        
JMFF049E03+           TTTTCTTGCCATGTCTGTATAAGCGAGTTTAAAGCCCTCGTGCACTCTTTTGTAGTCGGG
JMSF049I22+           TTTTCTTGCCATGTCTGTATAAGCGAGTTTAAAGCCCTCGTGCACTCTTTTGTAGTCGGG
                      ____________________________________________________________
consensus             TTTTCTTGCCATGTCTGTATAAGCGAGTTTAAAGCCCTCGTGCACTCTTTTGTAGTCGGG
 
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JMFF049E03+           GCATGGAAGTCCCACGGCTTTGGCTGCCATGCAATAGTAGTCACCTAGCTCTCCTTTGTA
JMSF049I22+           GCATGGAAGTCCCACGGCTTTGGCTGCCATGCAATAGTAGTCACCTAGCTCTCCTTTGTA
                      ____________________________________________________________
consensus             GCATGGAAGTCCCACGGCTTTGGCTGCCATGCAATAGTAGTCACCTAGCTCTCCTTTGTA
 
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JMFF049E03+           AGCGATCAGTGTACCAGTAACATCGAGTGTGACACAACGTAACCTTTTCAGCATAGACAT
JMSF049I22+           AGCGATCAGTGTACCAGTAACATCGAGTGTGACACAACGTAACCTTTTCAGCATAGACAT
                      ____________________________________________________________
consensus             AGCGATCAGTGTACCAGTAACATCGAGTGTGACACAACGTAACCTTTTCAGCATAGACAT
 
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JMFF049E03+           GGTAAAGATGTTGGAACTCTCGAGCTTCTGGTGCCCAAATTCTGAACTATATTTGAGACT
JMSF049I22+           GGTAAAGATGTTGGAACTCTCGAGCTTCTGGTGCCCAAATTCTGAACTATATTTGAGACT
                      ____________________________________________________________
consensus             GGTAAAGATGTTGGAACTCTCGAGCTTCTGGTGCCCAAATTCTGAACTATATTTGAGACT
 
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JMFF049E03+           CAACAAAACCTTGTGTTAGGGTGAGGATAGCGGCTTTATCAGCACCCCAACCGCTCCAGA
JMSF049I22+           CAACAAAACCTTGTGTTAGGGTGAGGATAGCGGCTTTATCAGCACCCCAACCGCTCCAGA
                      ____________________________________________________________
consensus             CAACAAAACCTTGTGTTAGGGTGAGGATAGCGGCTTTATCAGCACCCCAACCGCTCCAGA
 
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JMFF049E03+           AGCCGAAACGAGTACCAATCACTGTTGCGTCGCACAAAAAGCCATTTTTTCTGTGAAAAG
JMSF049I22+           AGCCGAAACGAGTACCAATCACTGTTGCGTCGCACAAAAAGCCATTTTTTCTGTGAAAAG
                      ____________________________________________________________
consensus             AGCCGAAACGAGTACCAATCACTGTTGCGTCGCACAAAAAGCCATTTTTTCTGTGAAAAG
 
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JMFF049E03+           CTTGATTTTTTGGACAC                                           
JMSF049I22+           CTTGATTTTTTGGACACCGTATATACATTCACAAGTTCACAGAGAGAAGAAATCCTAGCC
                      ____________________________________________________________
consensus             CTTGATTTTTTGGACACCGTATATACATTCACAAGTTCACAGAGAGAAGAAATCCTAGCC