Contig 010914:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF051C04+                              TAACCAATTGAATGTTTTAAAAGGACCATATTGAGAAAATG
JMSF049E13+                   TTTGAAACTAGTAACCAATTGAATGTTTTAAAAGGACCATATTGAGAAAATG
                      ____________________________________________________________
consensus                     TTTGAAACTAGTAACCAATTGAATGTTTTAAAAGGACCATATTGAGAAAATG
 
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JMSF051C04+           GTTTTCTTGTTCCAGCAGTTTTGACAGCTCTCTATGGTTTTGCAGAACAAAAAAAGGCAG
JMSF049E13+           GTTTTCTTGTTCCAGCAGTTTTGACAGCTCTCTATGGTTTTGCAGAACAAAAAAAGGCAG
                      ____________________________________________________________
consensus             GTTTTCTTGTTCCAGCAGTTTTGACAGCTCTCTATGGTTTTGCAGAACAAAAAAAGGCAG
 
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JMSF051C04+           TTTTCAAACCTCAGATGTTTGTGAGAAATAGGCAAGAATAGAAACTAACAACAAAGTTAC
JMSF049E13+           TTTTCAAACCTCAGATGTTTGTGAGAAATAGGCAAGAATAGAAACTAACAACAAAGTTAC
                      ____________________________________________________________
consensus             TTTTCAAACCTCAGATGTTTGTGAGAAATAGGCAAGAATAGAAACTAACAACAAAGTTAC
 
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JMSF051C04+           AGTACATGTAAATGCCAACACCACAATATTCAAAAGAGTGTATAAATTTTGCAAGATTAA
JMSF049E13+           AGTACATGTAAATGCCAACACCACAATATTCAAAAGAGTGTATAAATTTTGCAAGATTAA
                      ____________________________________________________________
consensus             AGTACATGTAAATGCCAACACCACAATATTCAAAAGAGTGTATAAATTTTGCAAGATTAA
 
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JMSF051C04+           GCAAGAAACCAACATAACACAATAAAAAAACTATGTAAATGCCATTATAAGTACTAGAAT
JMSF049E13+           GCAAGAAACCAACATAACACAATAAAAAAACTATGTAAATGCCATTATAAGTACTAGAAT
                      ____________________________________________________________
consensus             GCAAGAAACCAACATAACACAATAAAAAAACTATGTAAATGCCATTATAAGTACTAGAAT
 
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JMSF051C04+           CAAACTTTTGATCAATTCAAAGATGAAAAAAAATTGAAAACTTTCTGGAAAACTACATTC
JMSF049E13+           CAAACTTTTGATCAATTCAAAGATGAAAAAAAATTGAAAACTTTCTGGAAAACTACATTC
                      ____________________________________________________________
consensus             CAAACTTTTGATCAATTCAAAGATGAAAAAAAATTGAAAACTTTCTGGAAAACTACATTC
 
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JMSF051C04+           AGCTTCACTCTGATCCTTGGGCTACCAAAACACTCTCTCTGTCAGAACAAGAAATGGGTA
JMSF049E13+           AGCTTCACTCTGATCCTTGGGCTACCAAAACACTCTCTCTGTCAGAACAAGAAATGGGTA
                      ____________________________________________________________
consensus             AGCTTCACTCTGATCCTTGGGCTACCAAAACACTCTCTCTGTCAGAACAAGAAATGGGTA
 
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JMSF051C04+           CTCAAAAAATAGAATGTAGGATCAGAAATAAGGCAGAATTTCTTGTTACATTAACTAACT
JMSF049E13+           CTCAAAAAATAGAATGTAGGATCAGAAATAAGGCAGAATTTCTTGTTACATTAACTAACT
                      ____________________________________________________________
consensus             CTCAAAAAATAGAATGTAGGATCAGAAATAAGGCAGAATTTCTTGTTACATTAACTAACT
 
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JMSF051C04+           CCTTCTTCTGTACAAGATTAAAAAAAGGAAGCTTTTTTCATAGCTGAAAATCATGAAATT
JMSF049E13+           CCTTCTTCTGTACAAGATTAAAAAAAGGAAGCTTTTTTCATAGCTGAAAATCATGAAATT
                      ____________________________________________________________
consensus             CCTTCTTCTGTACAAGATTAAAAAAAGGAAGCTTTTTTCATAGCTGAAAATCATGAAATT
 
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JMSF051C04+           CATCAAGCTGGTTTCAGACAAGCAATTTTAGGAGTATATATATACATACGTACGTACACA
JMSF049E13+           CATCAAGCTGGTTTCAGACAAGCAATTTTAGGAGTATATATATACATACGTACGTACACA
                      ____________________________________________________________
consensus             CATCAAGCTGGTTTCAGACAAGCAATTTTAGGAGTATATATATACATACGTACGTACACA
 
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JMSF051C04+           GAAGCACAAAACGTACGATATGGAAGGCAATTAGGTGAAGATAAGGGCCGAATAATTCTC
JMSF049E13+           GAAGCACAAAACGTACGATATGGAAGGCAATTAGGTGAAGATAAGGGCCGAATAATTCTC
                      ____________________________________________________________
consensus             GAAGCACAAAACGTACGATATGGAAGGCAATTAGGTGAAGATAAGGGCCGAATAATTCTC
 
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JMSF051C04+           CGGTGGCCGGAGACGTCGGGAAACTGATGAGAGACCTCGCGCCGGC              
JMSF049E13+           CGGTGGCCGGAGACGTCGGGAAACTGATGAGAGACCTCGCGCCGGCGCAGCACGGCAGCC
                      ____________________________________________________________
consensus             CGGTGGCCGGAGACGTCGGGAAACTGATGAGAGACCTCGCGCCGGCGCAGCACGGCAGCC