Contig 010911:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037B21Sequence438010911 (3)ref|XP_009796020.1|2e-53PREDICTED: A-kinase anchor protein 17A [Nicotiana sylvestris]306008354 (2)
JMFF046C16Sequence550010911 (3)ref|XP_009796020.1|4e-74PREDICTED: A-kinase anchor protein 17A [Nicotiana sylvestris]563008354 (2)emb|CDP01196.1|1e-35unnamed protein product [Coffea canephora]
JMSF049C14Sequence662010911 (3)ref|XP_006356858.1|2e-71PREDICTED: A-kinase anchor protein 17A-like [Solanum tuberosum]740007195 (12)ref|XP_009624449.1|1e-87PREDICTED: aldose 1-epimerase-like isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049C14+                                                                     GG
                      ____________________________________________________________
consensus                                                                       GG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+               CAAAAGCAGCAATCTCTTCCCATTCTTTCTTCATCCCTTCAAAATCATCCGACGCC
JMSF049C14+           CCACCAAAAGCAGCAATCTCTTCCCATTCTTTCTTCATCCCTTCAAAATCATCCGACGCC
                      ____________________________________________________________
consensus             CCACCAAAAGCAGCAATCTCTTCCCATTCTTTCTTCATCCCTTCAAAATCATCCGACGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           GGCAGCACAGCACTCAGCTTGAACTTAGTGCCTTCAATGTTAACCTCCATACCATCCATT
JMFF037B21+                                                                   CATT
JMSF049C14+           GGCAGCACAGCACTCAGCTTGAACTTAGTGCCTTCAATGTTAACCTCCATAACCACCATT
                      ____________________________________________________________
consensus             GGCAGCACAGCACTCAGCTTGAACTTAGTGCCTTCAATGTTAACCTCCATACCCTCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           CTCTCCACAATTCCTCTCCTCCACTCCAGGAAGTTCTTCTCAGCTGCCTTAACTTCATCC
JMFF037B21+           CTCTCCACAATTCCTCTCCTCCACTCCAGGAAGTTCTTCTCAGCTGCCTTAACTTCATCC
JMSF049C14+           CTCTCCACAATTCCTCTCCTCCACTCCAGGAAGTTCTTCTCAGCTGCCTTAACTTCATCC
                      ____________________________________________________________
consensus             CTCTCCACAATTCCTCTCCTCCACTCCAGGAAGTTCTTCTCAGCTGCCTTAACTTCATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           TTCTCATCATCATACTGAGATTTCGAGGCCAAGAGCTTCGCCAGAAACCCTAGGTCCCGA
JMFF037B21+           TTCTCATCATCATACTGAGATTTCGAGGCCAAGAGCTTCGCCAGAAACCCTAGGTCCCGA
JMSF049C14+           TTCTCATCATCATACTGAGATTTCGAGGCCAAGAGCTTCGCCAGAAACCCTAGGTCCCGA
                      ____________________________________________________________
consensus             TTCTCATCATCATACTGAGATTTCGAGGCCAAGAGCTTCGCCAGAAACCCTAGGTCCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           ATACATAGGGTGCCGCGAGCAACCGGCTCGTCGCGCTTGCGCTTGTTGAGGTCCTTGAAT
JMFF037B21+           ATACATAGGGTGCCGCGAGCAACCGGCTCGTCGCGCTTGCGCTTGTTGAGGTCCTTGAAT
JMSF049C14+           ATACATAGGGTGCCGCGAGCAACCGGCTCGTCGCGCTTGCGCTTGTTGAGGTCCTTGAAT
                      ____________________________________________________________
consensus             ATACATAGGGTGCCGCGAGCAACCGGCTCGTCGCGCTTGCGCTTGTTGAGGTCCTTGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           CTCCGGACTTCGAGGTCTTCCTCTTGAACGGTGACGGAATGTGTGTTCTTCAGGTAATCG
JMFF037B21+           CTCCGGACTTCGAGGTCTTCCTCTTGAACGGTGACGGAATGTGTGTTCTTCAGGTAATCG
JMSF049C14+           CTCCGGACTTCGAGGTCTTCCTCTTGAACGGTGACGGAATGTGTGTTCTTCAGGTAATCG
                      ____________________________________________________________
consensus             CTCCGGACTTCGAGGTCTTCCTCTTGAACGGTGACGGAATGTGTGTTCTTCAGGTAATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           ATCAGTGACCGCTTCAGCTTCCACTCGTCGACCGGCGATACGGACTTGTCGGCCCGTGAG
JMFF037B21+           ATCAGTGACCGCTTCAGCTTCCACTCGTCGACCGGCGATACGGACTTGTCGGCCCGTGAG
JMSF049C14+           ATCAGTGACCGCTTCAGCTTCCACTCGTCGACCGGCGATACGGACTTGTCGGCCCGTGAG
                      ____________________________________________________________
consensus             ATCAGTGACCGCTTCAGCTTCCACTCGTCGACCGGCGATACGGACTTGTCGGCCCGTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           ACTGTGAGTAGGAGTTTGACACGTGGGACCAGTGAAAGTCCGCTTTCGAGCTCTACGGTT
JMFF037B21+           ACTGTGAGTAGGAGTTTGACACGTGGGACCAGTGAAAGTCCGCTTTCGAGCTCTACGGTT
JMSF049C14+           ACTGTGAGTAGGAGTTTGACACGTGGGACCAGTGAAAGTCCGCTTTCGAGCTCTACGGTT
                      ____________________________________________________________
consensus             ACTGTGAGTAGGAGTTTGACACGTGGGACCAGTGAAAGTCCGCTTTCGAGCTCTACGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           TCCGTTGGCCGGAGAAATTCTAAGGATCGATCGCTCATCTTCTTCTGTGCCTCGGTGGCG
JMFF037B21+           TCCGTTGGCCGGAGAAATTCTAAGGATCGATCGCTCATCTTCTTCTGTGCCTCGGTGGCG
JMSF049C14+           TCCGTTGGCCGGAGAAATTCTAAGGATCGATCGCTCATCTTCTTCTGTGCCTCGGTGGCG
                      ____________________________________________________________
consensus             TCCGTTGGCCGGAGAAATTCTAAGGATCGATCGCTCATCTTCTTCTGTGCCTCGGTGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046C16+           CGACGGGTCAAGTC                                              
JMFF037B21+           CGACGGGTCTAGTC                                              
JMSF049C14+           CGACGGGTCTAGTCAGCTTCTGCGCTATTCAGACGGGTTAGAACTTAGAATGAATATTCA
                      ____________________________________________________________
consensus             CGACGGGTCTAGTCAGCTTCTGCGCTATTCAGACGGGTTAGAACTTAGAATGAATATTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049C14+           ACAATATTAGCACATAGACCCTCCGAGAATTAACAAAATCCTAATTAAGATGTAACTATC
                      ____________________________________________________________
consensus             ACAATATTAGCACATAGACCCTCCGAGAATTAACAAAATCCTAATTAAGATGTAACTATC