| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001G13 | Sequence | 531 | 010908 (5) | gb|KJB36915.1| | 2e-81 | hypothetical protein B456_006G182500 [Gossypium raimondii] | 599 | 008121 (4) | ref|XP_010423956.1| | 1e-39 | PREDICTED: LIMR family protein At5g01460-like [Camelina sativa] |
| JMFF002F15 | Sequence | 592 | 010908 (5) | gb|KJB36913.1| | 2e-84 | hypothetical protein B456_006G182500 [Gossypium raimondii] gb|KJB36917.1| hypoth | 748 | 008121 (4) | gb|KDO56636.1| | 1e-48 | hypothetical protein CISIN_1g021594mg [Citrus sinensis] |
| JMFS095B03 | Sequence | 615 | 010908 (5) | gb|KJB36915.1| | 4e-72 | hypothetical protein B456_006G182500 [Gossypium raimondii] | |||||
| JMSF045O05 | Sequence | 787 | 010908 (5) | gb|KHN05546.1| | 2e-93 | LIMR family protein [Glycine soja] | 641 | 008121 (4) | gb|KDO56636.1| | 1e-58 | hypothetical protein CISIN_1g021594mg [Citrus sinensis] |
| JMSF048I15 | Sequence | 674 | 010908 (5) | gb|KJB36913.1| | 3e-80 | hypothetical protein B456_006G182500 [Gossypium raimondii] gb|KJB36917.1| hypoth | 727 | 008121 (4) | gb|KDO56636.1| | 2e-57 | hypothetical protein CISIN_1g021594mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF045O05+ TCAGATGAAGGACTTGC
____________________________________________________________
consensus TCAGATGAAGGACTTGC
. : . : . : . : . : . :
JMFF002F15+ TCGCTACTAGAGAATGA
JMSF045O05+ AGAATATGCAGAGCACTGATGAGGACCATTTCCAATACATGGCTCGCTACTAGAGAATGA
____________________________________________________________
consensus AGAATATGCAGAGCACTGATGAGGACCATTTCCAATACATGGCTCGCTACTAGAGAATGA
. : . : . : . : . : . :
JMFF002F15+ AAATGTGTTCGTGAAGGCAGTAGTACCAGAGGAAAGGTGTCTCACGGTGAAGTCTACCTT
JMFF001G13+ GGTGAAGTCTACCTT
JMSF045O05+ AAATGTGTTCGTGAAGGCAGTAGTACCAGAGGAAAGGTGTCTCACGGTGAAGTCTACCTT
JMSF048I15+ GGTGAAGTCTACCTT
____________________________________________________________
consensus AAATGTGTTCGTGAAGGCAGTAGTACCAGAGGAAAGGTGTCTCACGGTGAAGTCTACCTT
. : . : . : . : . : . :
JMFF002F15+ CCCAACAAGCCCATATAAAATTCCAAGCAAGAGAGCACACACAATTGCCGTGACCGCTAC
JMFF001G13+ CCCAACAAGCCCATATAAAATTCCAAGCAAGAGAGCACACACAATTGCCGTGACCGCTAC
JMSF045O05+ CCCAACAAGCCCATATAAAATTCCAAGCAAGAGAGCACACACAATTGCCGTGACCGCTAC
JMFS095B03+ TTCCAAGCAAGAGAGCACACACAATTGCCGTGACCGCTAC
JMSF048I15+ CCCAACAAGCCCATATAAAATTCCAAGCAAGAGAGCACACACAATTGCCGTGACCGCTAC
____________________________________________________________
consensus CCCAACAAGCCCATATAAAATTCCAAGCAAGAGAGCACACACAATTGCCGTGACCGCTAC
. : . : . : . : . : . :
JMFF002F15+ CCAACATAAAGAGCTCTTAATCCTCTTGCCAAGGCTCTTGTCCTGGTCGCCTTCATAGAA
JMFF001G13+ CCAACATAAAGAGCTCTTAATCCTCTTGCCAAGGCTCTTGTCCTGGTCGCCTTCATAGAA
JMSF045O05+ CCAACATAAAGAGCTCTTAATCCTCTTGCCAAGGCTCTTGTCCTGGTCGCCTTCATAGAA
JMFS095B03+ CCAACATAAAGAGCTCTTAATCCTCTGNCCAAGGCTCTTGTCCTGGTCGCCTTCATAGAA
JMSF048I15+ CCAACATAAAGAGCTCTTAATCCTCTTGCCAAGGGTCTTGTCCTGGTCGCCTTCATAGAA
____________________________________________________________
consensus CCAACATAAAGAGCTCTTAATCCTCTTGCCAAGGCTCTTGTCCTGGTCGCCTTCATAGAA
. : . : . : . : . : . :
JMFF002F15+ GAACATAGCGAATGGAATAATGAAGAAAACGAGCACAGCGTTAACAATGTAGATGGCGAG
JMFF001G13+ GAACATAGCGAATGGAATAATGAAGAAAACGAGCACAGCGTTAACAATGTAGATGGCGAG
JMSF045O05+ GAACATAGCGAATGGAATAATGAAGAAAACGAGCACAGCGTTAACAATGTAGATGGCGAG
JMFS095B03+ GAACATAGCGAATGGAATAATGAAGAAAACGAGCACAGCGTTAACAATGTAGATGGCGAG
JMSF048I15+ GAACATAGCGAACGGAATAATGAAGAAAACGAGCACAGCGTTAACAATGTAGATGGCGAG
____________________________________________________________
consensus GAACATAGCGAATGGAATAATGAAGAAAACGAGCACAGCGTTAACAATGTAGATGGCGAG
. : . : . : . : . : . :
JMFF002F15+ CCAGAGTTCCTTCATCGGAAGCGTGAGATTGCAGGCGCCGTTGTAAATCGAGTGGCGGCA
JMFF001G13+ CCAGAGTTCCTTCATCGGAAGCGTGAGATTGCAGGCGCCGTTGTAAATCGAGTGGCGGCA
JMSF045O05+ CCAGAGTTCCTTCATCGGAAGCGTGAGATTGCAGGCGCCGTTGTAAATCGAGTGGCGGCA
JMFS095B03+ CCAGAGTTCCTTCATCGGAAGCGTGAGATTGCAGGCGCCGTTGTAAATCGAGTGGCGGCA
JMSF048I15+ CCAGAGTTCCTTCATCGGAAGCGTGAGATTGCAGGCGCCGTTGTAAATCGAGTGGCGGCA
____________________________________________________________
consensus CCAGAGTTCCTTCATCGGAAGCGTGAGATTGCAGGCGCCGTTGTAAATCGAGTGGCGGCA
. : . : . : . : . : . :
JMFF002F15+ GGCCTGCCGATTTGCCACATCCGCCGGCAGCATGAGGATGGAGATGGCGGCGACGGAGAG
JMFF001G13+ GGCCTGCCGATTTGCCACATCCGCCGGCAGCATGAGGATGGAGATGGCGGCGACGGAGAG
JMSF045O05+ GGCCTGCCGATTTGCCACATCCGCCGGCAGCATGAGGATGGAGATGGCGGCGACGGAGAG
JMFS095B03+ GGCCTGCCGATTTGCCACATCCGCCGGCAGCATGAGGATGGAGATGGCGGCGACGGAGAG
JMSF048I15+ GGCCTGCCGATTTGCCACATCCGCCGGCAGCATGAGGATGGAGATGGCGGCGACGGAGAG
____________________________________________________________
consensus GGCCTGCCGATTTGCCACATCCGCCGGCAGCATGAGGATGGAGATGGCGGCGACGGAGAG
. : . : . : . : . : . :
JMFF002F15+ GCCGAAAACGACGACGAATTTAGGAAAATAGGCCTGGTTGGCATCGTCTGGGTGCTGGTA
JMFF001G13+ GCCGAAAACGACGACGAATTTAGGAAAATAGGCCTGGTTGGCATCGTCTGGGTGCTGGTA
JMSF045O05+ GCCGAAAACGACGACGAATTTAGGAAAATAGGCCTGGTTGGCATCGTCTGGGTGCTGGTA
JMFS095B03+ GCCGAAAACGACGACGAATTTAGGAAAATAGGCCTGGTTGGCATCGTCTGGGTGCTGGTA
JMSF048I15+ GCCGAAAACGACGACGAATTTAGGAAAATAGGCCTGGTTGGCATCGTCTGGGTGCTGGTA
____________________________________________________________
consensus GCCGAAAACGACGACGAATTTAGGAAAATAGGCCTGGTTGGCATCGTCTGGGTGCTGGTA
. : . : . : . : . : . :
JMFF002F15+ GTTTACGAGGAGATAGATGTTGATGAGGAAGACGATAACGCACACCACTATGGCGACGAT
JMFF001G13+ GTTTACGAGGAGATAGATGTTGATGAGGAAGACGATAACGCACACCACTATGGCGACGAT
JMSF045O05+ GTTTACGAGGAGATAGATGTTGATGAGGAAGACGATAACGCACACCACTATGGCGACGAT
JMFS095B03+ GTTTACGAGGAGATAGATGTTGATGAGGAAGACGATAACGCACACCACTATGGCGACGAT
JMSF048I15+ GTTTACGAGGAGATAGATGTTGATGAGGAAGACGATAACGCACACCACTATGGCGACGAT
____________________________________________________________
consensus GTTTACGAGGAGATAGATGTTGATGAGGAAGACGATAACGCACACCACTATGGCGACGAT
. : . : . : . : . : . :
JMFF002F15+ CAACAGCGCGAGATTGAAATCCCCCATTTTCTCCGGCTACGAAGAAATGTGATTTCTCCC
JMFF001G13+ CAACAGCGCGAGATTGAAATCCCCCATTTTCTCCGGCTACGAAGAAATGTGATTTCTCCC
JMSF045O05+ CAACAGCGCGAGATTGAAATCCCCCATTTTCTCCGGCTACGAAGAAATGTGATTTCTCCC
JMFS095B03+ CAACAGCGCGAGATTGAAATCCCCCATTTTCTCCGGCTACGAAGAAATGTGATTTCTCCC
JMSF048I15+ CAACAGCGCGAGATTGAAATCCCCCATTTTCTCCGGCTACGAAGAAATGTGATTTCTCCC
____________________________________________________________
consensus CAACAGCGCGAGATTGAAATCCCCCATTTTCTCCGGCTACGAAGAAATGTGATTTCTCCC
. : . : . : . : . : . :
JMFF002F15+ TCGATTCGAACCAGTTCCAGATTTGACTTGATCC
JMFF001G13+ TCGATTCGAACCAGTTCCAGATTTGACTTGATCC
JMSF045O05+ TCGATTCGAACCAGTTCCAGATTTGACTTGATCCGAGTCGGGTAGAAATTAGTGTAACGA
JMFS095B03+ TCGATTCGAACCAGTTCCAGATTTGACTTGATCCGAGTCGGGTAGAAATTAGTGTAACGA
JMSF048I15+ TCGATTCGAACCAGTTCCAGATTTGACTTGATCCGAGTCGGGTAGAAATTAGTGTAACGA
____________________________________________________________
consensus TCGATTCGAACCAGTTCCAGATTTGACTTGATCCGAGTCGGGTAGAAATTAGTGTAACGA
. : . : . : . : . : . :
JMSF045O05+ GTTTATAGGTTGTTGGTCGTGGACAAAAAAAAACGGGTCTGGATTTAAAACGGGTCCTCT
JMFS095B03+ GTTTATAGGTTGTTGGTCGTGGAC-AAAAAAAACGGGTCTGGATTTAAAACGGGTCCTCT
JMSF048I15+ GTTTATAGGTTGTTGGTCGTGGAC-AAAAAAAACGGGTCTGGATTTAAAACGGGTCCTCT
____________________________________________________________
consensus GTTTATAGGTTGTTGGTCGTGGAC-AAAAAAAACGGGTCTGGATTTAAAACGGGTCCTCT
. : . : . : . : . : . :
JMSF045O05+ GCTGCTAATCTGGGTAGGGAAATCTGCAATGGAGGAGAGCCGGTT
JMFS095B03+ GCTGCTAATCTGGGTAGGGAAATCTGCAATGGAGGA
JMSF048I15+ GCTGCTAATCTGGGTAGGGAAATCTGCAATGGAGGAGAGCCGGTTTGATGCGTTCAGTCC
____________________________________________________________
consensus GCTGCTAATCTGGGTAGGGAAATCTGCAATGGAGGAGAGCCGGTTTGATGCGTTCAGTCC