| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF016K02 | Sequence | 445 | 010907 (6) | ref|XP_009802855.1| | 1e-30 | PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris] | 754 | 010907 (6) | ref|XP_009802855.1| | 1e-40 | PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris] |
| JMSF027J24 | Sequence | 665 | 010907 (6) | ref|XP_009802855.1| | 3e-59 | PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris] | 750 | 010907 (6) | ref|XP_009802855.1| | 1e-40 | PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris] |
| JMSF048I02 | Sequence | 645 | 010907 (6) | ref|XP_009802855.1| | 3e-59 | PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris] | 710 | 010907 (6) | ref|XP_009802855.1| | 2e-50 | PREDICTED: transcription factor MYB1R1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF027J24- ATTGTACGCTAAGAAGCATTCTGATCTAT
rJMSF016K02- ATTATTGTACGCTAAGAAGCATTCTGATCTAT
____________________________________________________________
consensus ATTATTGTACGCTAAGAAGCATTCTGATCTAT
. : . : . : . : . : . :
rJMSF027J24- ATAGCATAAAACAATAAGCTGGGCGGGCAAGGCATGATAAATCTGGAATCTGTACAACAA
rJMSF016K02- ATAGCATAAAACAATAAGCTGGGCGGGCAAGGCATGATAAATCTGGAATCTGTACAACAA
____________________________________________________________
consensus ATAGCATAAAACAATAAGCTGGGCGGGCAAGGCATGATAAATCTGGAATCTGTACAACAA
. : . : . : . : . : . :
rJMSF027J24- TAAAAGCCCAAATTCTACATCTTTCCTTAATGGTTACAAATATGCAAAGCTTCTTCTTTT
rJMSF016K02- TAAAAGCCCAAATTCTACATCTTTCCTTAATGGTTACAAATATGCAAAGCTTCTTCTTTT
rJMSF048I02- AATTCTACATCTTTCCTTAATGGTTACAAATATGCAAAGCTTCTTCTTTT
____________________________________________________________
consensus TAAAAGCCCAAATTCTACATCTTTCCTTAATGGTTACAAATATGCAAAGCTTCTTCTTTT
. : . : . : . : . : . :
rJMSF027J24- GTTCTCATGCCACGCCGACGACAGTGTCTCCATTAATCCCCGGGAATACCAAGTGCATTG
rJMSF016K02- GTTCTCATGCCACGCCGACGACAGTGTCTCCATTAATCCCCGGGAATACCAAGTGCATTG
rJMSF048I02- GTTCTCATGCCACGCCGACGACAGTGTCTCCATTAATCCCCGGGAATACCAAGTGCATTG
____________________________________________________________
consensus GTTCTCATGCCACGCCGACGACAGTGTCTCCATTAATCCCCGGGAATACCAAGTGCATTG
. : . : . : . : . : . :
rJMSF027J24- ACGACGAGTGATCCAATGACATGGACAGTTTCAAGGACAGAGATGATGGGTCAAGGAGCT
rJMSF016K02- ACGACGAGTGATCCAATGACATGGACAGTTTCAAGGACAGAGATGATGGGTCAAGGAGCT
rJMSF048I02- ACGACGAGTGATCCAATGACATGGACAGTTTCAAGGACAGAGATGATGGGTCAAGGAGCT
____________________________________________________________
consensus ACGACGAGTGATCCAATGACATGGACAGTTTCAAGGACAGAGATGATGGGTCAAGGAGCT
. : . : . : . : . : . :
rJMSF027J24- GAGAGGGTGAACAAGGAAGCGAAACGACAGGAAGTGGATGGACAAGTATGGCGGATGTGT
rJMSF016K02- GAGAGGGTGAACAAGGAAGCGAAACGACAGGAAGTGGATGGACAAGTATGGCGGATGTGT
rJMSF048I02- GAGAGGGTGAACAAGGAAGCGAAACGACAGGAAGTGGATGGACAAGTATGGCGGATGTGT
____________________________________________________________
consensus GAGAGGGTGAACAAGGAAGCGAAACGACAGGAAGTGGATGGACAAGTATGGCGGATGTGT
. : . : . : . : . : . :
rJMSF027J24- TGTTTACTTGGACCAGATTTTCCATTGGCCTCTCAATTTGTAGTGGTAGCAAAACAGGAG
rJMSF016K02- TGTTTACTTGGACCAGATTTTCCATTGGCCTCTCAATTTGTAGTGGTAGCAAAACAGGAG
rJMSF048I02- TGTTTACTTGGACCAGATTTTCCATTGGCCTCTCAATTTGTAGTGGTAGCAAAACAGGAG
JMSF027J24+ CTCTCAATTTGTAGTGGTAGCAAAACAGGAG
____________________________________________________________
consensus TGTTTACTTGGACCAGATTTTCCATTGGCCTCTCAATTTGTAGTGGTAGCAAAACAGGAG
. : . : . : . : . : . :
rJMSF027J24- CAACAGTCAGGGGTGGAGGAACCAGGTTCCCTTCTTCAGGAGACACCGCGTGAGTGGTGA
rJMSF016K02- CAACAGTCAGGGGTGGAGGAACCAGGTTCCCTTCTTCAGGAGACACCGCGTGAGTGGTGA
rJMSF048I02- CAACAGTCAGGGGTGGAGGAACCAGGTTCCCTTCTTCAGGAGACACCGCGTGAGTGGTGA
JMSF027J24+ CAACAGTCAGGGGTGGAGGAACCAGGTTCCCTTCTTCAGGAGACACCGCGTGAGTGGTGA
JMSF048I02+ GAGGAACCAGGTTCCCTTCTTCAGGAGACACCGCGTGAGTGGTGA
____________________________________________________________
consensus CAACAGTCAGGGGTGGAGGAACCAGGTTCCCTTCTTCAGGAGACACCGCGTGAGTGGTGA
. : . : . : . : . : . :
rJMSF027J24- TATCAAAGAGGCTGGATCTGCGGCGGCGCCTATTGAGATTGGTCCGTCGGAGAAAGTATT
rJMSF016K02- TATCAAAGAGGCTGGATCTGCGGCGGCGCCTATTGAGATTGGTCCGTCGGAGAAAGTATT
rJMSF048I02- TATCAAAGAGGCTGGATCTGCGGCGGCGCCTATTGAGATTGGTCCGTCGGAGAAAGTATT
JMSF027J24+ TATCAAAGAGGCTGGATCTGCGGCGGCGCCTATTGAGATTGGTCCGTCGGAGAAAGTATT
JMSF048I02+ TATCAAAGAGGCTGGATCTGCGGCGGCGCCTATTGAGATTGGTCCGTCGGAGAAAGTATT
____________________________________________________________
consensus TATCAAAGAGGCTGGATCTGCGGCGGCGCCTATTGAGATTGGTCCGTCGGAGAAAGTATT
. : . : . : . : . : . :
rJMSF027J24- TCTGAGCATGACTTGCTACTTGTGTGGGTGTACGAGTCTTTACATAATTTCTAGAGATTC
rJMSF016K02- TCTGAGCATGACTTGCTACTTGTGTGGGTGTACGAGTCTTTACATAATTTCTAGAGATTC
rJMSF048I02- TCTGAGCATGACTTGCTACTTGTGTGGGTGTACGAGTCTTTACATAATTTCTAGAGATTC
JMSF027J24+ TCTGAGCATGACTTGCTACTTGTGTGGGTGTACGAGTCTTTACATAATTTCTAGAGATTC
JMSF048I02+ TCTGAGCATGACTTGCTACTTGTGTGGGTGTACGAGTCTTTACATAATTTCTAGAGATTC
____________________________________________________________
consensus TCTGAGCATGACTTGCTACTTGTGTGGGTGTACGAGTCTTTACATAATTTCTAGAGATTC
. : . : . : . : . : . :
rJMSF027J24- CTCTCCAGTTTCCTTTTCCCACTTTCTGTAATCCCAAAAGGAACAGCTTGTGCTCTTCTT
rJMSF016K02- CTCTCCAGTTTCCTTTTCCCACTTTCTGTAATCCCAAAAGGAACAGCTTGTGCTCTTCTT
rJMSF048I02- CTCTCCAGTTTCCTTTTCCCACTTTCTGTAATCCCAAAAGGAACAGCTTGTGCTCTTCTT
JMSF016K02+ CCAAAAGGAACAGCTTGTGCTCTTCTT
JMSF027J24+ CTCTCCAGTTTCCTTTTCCCACTTTCTGTAATCCCAAAAGGAACAGCTTGTGCTCTTCTT
JMSF048I02+ CTCTCCAGTTTCCTTTTCCCACTTTCTGTAATCCCAAAAGGAACAGCTTGTGCTCTTCTT
____________________________________________________________
consensus CTCTCCAGTTTCCTTTTCCCACTTTCTGTAATCCCAAAAGGAACAGCTTGTGCTCTTCTT
. : . : . : . : . : . :
rJMSF027J24- CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
rJMSF016K02- CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
rJMSF048I02- CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
JMSF016K02+ CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
JMSF027J24+ CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
JMSF048I02+ CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
____________________________________________________________
consensus CAGTCCATGGAACTCCTCGCTTACGGTCGCGGCCACCGCTAGAGCGGTGCGGGACGTCGT
. : . : . : . : . : . :
rJMSF027J24- CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
rJMSF016K02- CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
rJMSF048I02- CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
JMSF016K02+ CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
JMSF027J24+ CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
JMSF048I02+ CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
____________________________________________________________
consensus CATCAGCCGAGGCATAGCCGTCGTCCACCACCGCTTTCATCGACTCATTATCTGTCGTCG
. : . : . : . : . : . :
rJMSF027J24- C
rJMSF016K02- CA
rJMSF048I02- CAGAATTAAGATGCTCGTACTGAGACAAGTTATTCAAACTGACGCTCTTCCTCATGGGG
JMSF016K02+ CAGAATTAAGATGCTCGTACTGAGACAAGTTATTCAAACTGACGCTCTTCCTCATGGGGT
JMSF027J24+ CAGAATTAAGATGCTCGTACTGAGACAAGTTATTCAAACTGACGCTCTTCCTCATGGGGT
JMSF048I02+ CAGAATTAAGATGCTCGTACTGAGACAAGTTATTCAAACTGACGCTCTTCCTCATGGGGT
____________________________________________________________
consensus CAGAATTAAGATGCTCGTACTGAGACAAGTTATTCAAACTGACGCTCTTCCTCATGGGGT
. : . : . : . : . : . :
JMSF016K02+ CCACCCTCACCCGCACCCCAAACAGCATGATCTC
JMSF027J24+ CCACCCTCACCCGCACCCCAAACAGCATGATCTCACCAGAACTTTCCACACCGGCGGAGG
JMSF048I02+ CCACCCTCACCCGCACCCCAAACAGCATGATCTCACCAGAACTTTCCACACCGGCGGAGG
____________________________________________________________
consensus CCACCCTCACCCGCACCCCAAACAGCATGATCTCACCAGAACTTTCCACACCGGCGGAGG
. : . : . : . : . : . :
JMSF027J24+ CCGACGACAGCTCGTCGCAAGTGCGCGAGTCCTGCAGGCCGTTGCTGACACAGCTGAAGC
JMSF048I02+ CCGACGACAGCTCGTCGCAAGTGCGCGAGTCCTGCAGGCCGTTGCTGACACAGCTGAAGC
____________________________________________________________
consensus CCGACGACAGCTCGTCGCAAGTGCGCGAGTCCTGCAGGCCGTTGCTGACACAGCTGAAGC
. : . : . : . : . : . :
JMSF027J24+ CACAGTCGGCAACCATCCTTAAACTCCCCATGAATCCACAAAAGTTATCAAACAATTGAT
JMSF048I02+ CACAGTCGGCAACCATCCTTAAACTCCCCATGAATCCACAAAAGTTATCAAACAATTGAT
____________________________________________________________
consensus CACAGTCGGCAACCATCCTTAAACTCCCCATGAATCCACAAAAGTTATCAAACAATTGAT
. : . : . : . : . : . :
JMSF027J24+ TGAAGCACTAAGGATGAGATCATGTATGCATAC
JMSF048I02+ TGAAGCACTAAGGATGAGATCATGTATGCATACAGATTATATATGTAGCCTATAGATGCC
____________________________________________________________
consensus TGAAGCACTAAGGATGAGATCATGTATGCATACAGATTATATATGTAGCCTATAGATGCC