Contig 010904:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF053A11+                                           TATCAGGAGANTCAGATGCCAAACCTGC
                      ____________________________________________________________
consensus                                             TATCAGGAGANTCAGATGCCAAACCTGC
 
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JMSF040O07+                 TGCAACAAAAACAACTACCATGCCATGATACAGGTAGGCTCAAAACTCTGATTT
JMSF053A11+           CATGGCTGCAACAAAAACAACTACCATGCCATGATACAGGTAGGCTCAAAACTCTGATTT
                      ____________________________________________________________
consensus             CATGGCTGCAACAAAAACAACTACCATGCCATGATACAGGTAGGCTCAAAACTCTGATTT
 
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JMSF040O07+           ACAATACATAGAACAAAACTCGTCACAGCCTCCAGAGCTAAAATTGGAAGGCGGGAGTAT
JMSF053A11+           ACAATACATAGAACAAAACTCGTCACAGCCTCCAGAGCTAAAATTGGAAGGCGGGAGTAT
JMSF047K13+           ACAATACATAGAACAAAACTCGTCACAGCCTCCAGAGCTAAAATTGGAAGGCGGGAGTAT
                      ____________________________________________________________
consensus             ACAATACATAGAACAAAACTCGTCACAGCCTCCAGAGCTAAAATTGGAAGGCGGGAGTAT
 
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JMSF040O07+           AATTAATCACAGCAACTGTTATAAAAGATGCAAACTTTAGGGACCAAAAATGGCATTTCC
JMSF053A11+           AATTAATCACAGCAACTGTTATAAAAGATGCAAACTTTAGGGACCAAAAATGGCATTTCC
JMSF047K13+           AATTAATCACAGCAACTGTTATAAAAGATGCAAACTTTAGGGACCAAAAATGGCATTTCC
                      ____________________________________________________________
consensus             AATTAATCACAGCAACTGTTATAAAAGATGCAAACTTTAGGGACCAAAAATGGCATTTCC
 
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JMSF040O07+           CCAATCATGGGTAAGATTTATTGATGCTTAGATATTTATCAAAATGCATTATTCTTGAAA
JMSF053A11+           CCAATCATGGGTAAGATTTATTGATGCTTAGATATTTATCAAAATGCATTATTCTTGAAA
JMSF047K13+           CCAATCATGGGTAAGATTTATTGATGCTTAGATATTTATCAAAATGCATTATTCTTGAAA
                      ____________________________________________________________
consensus             CCAATCATGGGTAAGATTTATTGATGCTTAGATATTTATCAAAATGCATTATTCTTGAAA
 
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JMSF040O07+           TTAGGCATAACAGACAAGAACCGAAGCTACAGAGTTTGCAGCTATACTGCCTGCATTACA
JMSF053A11+           TTAGGCATAACAGACAAGAACCGAAGCTACAGAGTTTGCAGCTATACTGCCTGCATTACA
JMSF047K13+           TTAGGCATAACAGACAAGAACCGAAGCTACAGAGTTTGCAGCTATACTGCCTGCATTACA
                      ____________________________________________________________
consensus             TTAGGCATAACAGACAAGAACCGAAGCTACAGAGTTTGCAGCTATACTGCCTGCATTACA
 
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JMSF040O07+           AAAGAAACCCCAACACGAAATCTTTCAAACCAAAAATTTATAGGCTCAGAGCTTCCATCC
JMSF053A11+           AAAGAAACCCCAACACGAAATCTTTCAAACCAAAAATTTATAGGCTCAGAGCTTCCATCC
JMSF047K13+           AAAGAAACCCCAACACGAAATCTTTCAAACCAAAAATTTATAGGCTCAGAGCTTCCATCC
                      ____________________________________________________________
consensus             AAAGAAACCCCAACACGAAATCTTTCAAACCAAAAATTTATAGGCTCAGAGCTTCCATCC
 
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JMSF040O07+           TTTCAAGGACTAAGATGTGAATCCCTTGATGGCTGCTAAAATCAGTATCCTTACGAATGG
JMSF053A11+           TTTCAAGGACTAAGATGTGAATCCCTTGATGGCTGCTAAAATCAGTATCCTTACGAATGG
JMSF047K13+           TTTCAAGGACTAAGATGTGAATCCCTTGATGGCTGCTAAAATCAGTATCCTTACGAATGG
                      ____________________________________________________________
consensus             TTTCAAGGACTAAGATGTGAATCCCTTGATGGCTGCTAAAATCAGTATCCTTACGAATGG
 
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JMSF040O07+           GATTTCAAGAAGAAACATTCCCGCAGAATCACTGAGATGCCTTGCCAAGATCATGGGTTC
JMSF053A11+           GATTTCAAGAAGAAACATTCCCGCAGAATCACTGAGATGCCTTGCCAAGATCATGGGTTC
JMSF047K13+           GATTTCAAGAAGAAACATTCCCGCAGAATCACTGAGATGCCTTGCCAAGATCATGGGTTC
                      ____________________________________________________________
consensus             GATTTCAAGAAGAAACATTCCCGCAGAATCACTGAGATGCCTTGCCAAGATCATGGGTTC
 
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JMSF040O07+           ACATCAAAATCTTGAAATTTTTAATCTTCATAGCCAAAGGAACTGGGAAACAATGAGGTG
JMSF053A11+           ACATCAAAATCTTGAAATTTTTAATCTTCATAGCCAAAGGAACTGGGAAACAATGAGGTG
JMSF047K13+           ACATCAAAATCTTGAAATTTTTAATCTTCATAGCCAAAGGAACTGGGAAACAATGAGGTG
                      ____________________________________________________________
consensus             ACATCAAAATCTTGAAATTTTTAATCTTCATAGCCAAAGGAACTGGGAAACAATGAGGTG
 
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JMSF040O07+           TAGTGTGTAATTAACGAAAATGATGGGTTGTTTGATAGTGGAAGCTTTGGATGATCATTG
JMSF053A11+           TAGTGTGTAATTAACGAAAATGATGGGTTGTTTGATAGTGGAAGCTTTGGATGATCATTG
JMSF047K13+           TAGTGTGTAATTAACGAAAATGATGGGTTGTTTGATAGTGGAAGCTTTGGATGATCATTG
                      ____________________________________________________________
consensus             TAGTGTGTAATTAACGAAAATGATGGGTTGTTTGATAGTGGAAGCTTTGGATGATCATTG
 
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JMSF040O07+           GCTGAGAAACACGGCATAGAGGAGGCAACCACCCATGGAAATCCCTCTACCTCTCCGCGT
JMSF053A11+           GCTGAGAAACACGGCATAGAGGAGGCAACCACCCATGGAAATCCCTCTACCTCTCCGCGT
JMSF047K13+           GCTGAGAAACACGGCATAGAGGAGGCAACCACCCATGGAAATCCCTCTACCTCTCCGCGT
                      ____________________________________________________________
consensus             GCTGAGAAACACGGCATAGAGGAGGCAACCACCCATGGAAATCCCTCTACCTCTCCGCGT
 
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JMSF040O07+           GTATCCAGCCTCAGACTT                                          
JMSF053A11+           GTATCCAGCCTCAGACTT                                          
JMSF047K13+           GTATCCAGCCTCAGACTTAAACTAATGAGAGATTCTTGAAAGATTTCTTCTCTTGCTGTC
                      ____________________________________________________________
consensus             GTATCCAGCCTCAGACTTAAACTAATGAGAGATTCTTGAAAGATTTCTTCTCTTGCTGTC