| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010O02 | Sequence | 551 | 010903 (11) | ref|XP_009592252.1| | 1e-76 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana tomentosif | 439 | 010903 (11) | gb|KFK35189.1| | 4e-17 | hypothetical protein AALP_AA5G251700 [Arabis alpina] |
| JMFF019J20 | Sequence | 502 | 010903 (11) | ref|XP_009768645.1| | 1e-52 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris | 676 | 010903 (11) | ref|XP_009592252.1| | 1e-95 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana tomentosif |
| JMFF023E01 | Sequence | 326 | 010903 (11) | 576 | 005823 (6) | gb|AHL84159.1| | 3e-71 | cysteine synthase [Nicotiana tabacum] | |||
| JMSF010M20 | Sequence | 278 | 010903 (11) | ref|XP_009768645.1| | 3e-07 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris | 835 | 005823 (6) | ref|XP_008800744.1| | 4e-51 | PREDICTED: cysteine synthase-like [Phoenix dactylifera] |
| JMSF015G04 | Sequence | 238 | 010903 (11) | 778 | 010903 (11) | gb|AHL84159.1| | 1e-112 | cysteine synthase [Nicotiana tabacum] | |||
| JMSF015J11 | Sequence | 414 | 010903 (11) | ref|XP_009768645.1| | 1e-38 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris | 389 | 005823 (6) | dbj|BAD93958.1| | 1e-28 | cysteine synthase [Arabidopsis thaliana] |
| JMSF042C03 | Sequence | 269 | 005823 (6) | gb|KHG11750.1| | 0.001 | Cysteine synthase, chloroplastic/chromoplastic [Gossypium arboreum] | 227 | 010903 (11) | gb|KHG11750.1| | 7e-04 | Cysteine synthase, chloroplastic/chromoplastic [Gossypium arboreum] |
| JMSF047I12 | Sequence | 723 | 010903 (11) | ref|XP_009592252.1| | 4e-94 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana tomentosif | 763 | 005823 (6) | ref|XP_008800744.1| | 2e-51 | PREDICTED: cysteine synthase-like [Phoenix dactylifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF042C03- ATCACTTT
____________________________________________________________
consensus ATCACTTT
. : . : . : . : . : . :
rJMSF042C03- GCCACAAATGTAGCACAAAGAAAAATTACACCAGAGATCATTTAGTTCTGAATTACAAGT
rJMFF019J20- AAGAAAAATTACACCAGAGATCATTTAGTTCTGAATTACAAGT
rJMFF010O02- TTCTGANTTACAAGT
rJMSF015G04- ACAAATGTAGCACAAAGAAAAATTACACCAGAGATCATTTAGTTCTGAATTACAAGT
____________________________________________________________
consensus GCCACAAATGTAGCACAAAGAAAAATTACACCAGAGATCATTTAGTTCTGAATTACAAGT
. : . : . : . : . : . :
rJMSF042C03- TGATTATGCAACAATCCACCAAACTATAACAAAAATTCATCAAAATTTGTTTTTATTTGC
rJMFF019J20- TGATTATGCAACAATCCACCAAACTATAACAAAAATTCATCAAAATTTGTTTTTATTTGC
rJMFF010O02- TGATTATGCAACAATCCNCCAAACTATAACAAAAATTCNTCAAAATTTGTTTTTATTTGC
rJMSF015G04- TGATTATGCAACAATCCACCAAACTATAACAAAAATTCATCAAAATTTGTTTTTATTTGC
____________________________________________________________
consensus TGATTATGCAACAATCCACCAAACTATAACAAAAATTCATCAAAATTTGTTTTTATTTGC
. : . : . : . : . : . :
rJMSF042C03- GTTCAGGAAATCACTT-CAAAATCAATATGCTCACTCCGGTTGCATTTTTTCGCATTCAT
rJMFF019J20- GTTCAGGAAATCACTT-CAAAATCAATATGCTCACTCCGGTTGCATTTTTTCGCATTCAT
rJMFF010O02- GTTCAGGAAATCANTTGCAAAANCAATATGCTCACTCCGGTNGCNTTTTTTCNNNTTCNT
rJMSF015G04- GTTCAGGAAATCACTT-CAAAATCAATATGCTCACTCCGGTTGCATTTTTTCGCATTCAT
____________________________________________________________
consensus GTTCAGGAAATCACTT-CAAAATCAATATGCTCACTCCGGTTGCATTTTTTCGCATTCAT
. : . : . : . : . : . :
rJMSF042C03- CCCGAATCGATTGGAAAAGTATACTCGATAGATACC
rJMFF019J20- CCCGAATCGATTGGAAAAGTATACTCGATAGATACCGCTCCCCAAAGCTCGGGAAAACAA
rJMFF010O02- CCCAAATCAATNGGAAAAGAATNCTCNATANATACCGCTCCCCAAAGCTCGGNAAAACAA
rJMSF015G04- CCCGAATCGATTGGAAAAGTATACTCGATAGATACCGCTCCCCAAAGCTCGGGAAAACAA
____________________________________________________________
consensus CCCGAATCGATTGGAAAAGTATACTCGATAGATACCGCTCCCCAAAGCTCGGGAAAACAA
. : . : . : . : . : . :
rJMFF019J20- CCGCAATAAGCTTTCCCGCATTCTCAGGTCGCTTTGCAACCTCTATTGCAGCAGCTGCAG
rJMFF010O02- CCNCAATAANCTTTCCCNCATTCNCAGGTCGC-TTGCAACCTCTATTGCAGCANCTGCAG
rJMSF015G04- CCGCAATAAGCTTTCCCGCATTCTCAGGTCGCTTTGCAACCTCTATTGCAGCAGCTGCAG
____________________________________________________________
consensus CCGCAATAAGCTTTCCCGCATTCTCAGGTCGCTTTGCAACCTCTATTGCAGCAGCTGCAG
. : . : . : . : . : . :
rJMFF019J20- CTGCTCCCGAGGAAATGCCCACCAGCAATCCTTCTTTAACTGCTAATTGCTTCGCAGTTT
rJMFF010O02- CTGNTCCCNAGGAAATGCCCACCANNAATCCTTCTTNAANNGCNAATTGCTTCGCAGTTT
rJMSF015G04- CTGCTCCCGAGGAAATGCCCACCAGCAATCCTTCTTTAACTGCTAATTGCTTCGCAGTTT
____________________________________________________________
consensus CTGCTCCCGAGGAAATGCCCACCAGCAATCCTTCTTTAACTGCTAATTGCTTCGCAGTTT
. : . : . : . : . : . :
rJMFF019J20- CAACAGCTACATCACTTGATATCTCTATTACTTCGTCCACCACTTCTTGATCTAAATTTC
rJMFF010O02- CANCAGCTACATCACTTNATATCTCTATNACTTCGTCCACCACTTCTTGANCNAAATTTC
rJMSF015G04- CAACAGCTACATCACTTGATATCTCTATTACTTCGTCCACCACTTCTTGATCTAAATTTC
____________________________________________________________
consensus CAACAGCTACATCACTTGATATCTCTATTACTTCGTCCACCACTTCTTGATCTAAATTTC
. : . : . : . : . : . :
rJMFF019J20- TTGGAATAAAACCTGCCCCAATCCCTTGAATTTTGTGAGGGCC
rJMFF010O02- TTGGAATAAANCCTGCCCCANTCCCTTGAATTTNGTGAGGGCCNGGNTTTCCACCGGATA
rJMSF015G04- TTGGAATAAAACCTGCCCCAATCCCTTGAATTTTGTGAGGGCCAGGCTTTCCACCGGATA
____________________________________________________________
consensus TTGGAATAAAACCTGCCCCAATCCCTTGAATTTTGTGAGGGCCAGGCTTTCCACCGGATA
. : . : . : . : . : . :
rJMFF010O02- ATACG
rJMSF015G04- ATACGTTGCTTTCTGTTGGCTCCACGCCAATGATCTGAATGTTAGGGTTTTGGTCCTTGA
____________________________________________________________
consensus ATACGTTGCTTTCTGTTGGCTCCACGCCAATGATCTGAATGTTAGGGTTTTGGTCCTTGA
. : . : . : . : . : . :
rJMSF015G04- GAAATCGCCCTGCACCAGAAATGGTTCCACCAGTACCAATACCTGCAACAAGTATGTCCA
____________________________________________________________
consensus GAAATCGCCCTGCACCAGAAATGGTTCCACCAGTACCAATACCTGCAACAAGTATGTCCA
. : . : . : . : . : . :
rJMSF015G04- ACTTTCCTTTCGTATCTTCCCAGATCTCCGGGCCAGTTGTTTCATAGTGTATCTTAGGAT
____________________________________________________________
consensus ACTTTCCTTTCGTATCTTCCCAGATCTCCGGGCCAGTTGTTTCATAGTGTATCTTAGGAT
. : . : . : . : . : . :
rJMSF015G04- TTGCAGGATTGTCGAATTGTTGAAGCATATAGGCATTGGGTGTTTTATTCACTATCTCTT
JMSF047I12+ CTT
____________________________________________________________
consensus TTGCAGGATTGTCGAATTGTTGAAGCATATAGGCATTGGGTGTTTTATTCACTATCTCTT
. : . : . : . : . : . :
rJMSF015G04- CAGCTTTTTGAACAGCGCCTTTCATTCCCGTGGCTGGATCCGTCACAATCAG
JMSF047I12+ CAGCTTTTTGAACAGCGCCTTTCATTCCCGTGGCTGGATCCGTCACAATCAGATCAGCAC
____________________________________________________________
consensus CAGCTTTTTGAACAGCGCCTTTCATTCCCGTGGCTGGATCCGTCACAATCAGATCAGCAC
. : . : . : . : . : . :
JMFF010O02+ TCAAGACTCATCGATGCAGGCATCGTTAAAATGA
JMSF047I12+ CAAAAGCTTTCAGAAGAACCCTTCTTTCAAGACTCATCGATGCAGGCATCGTTAAAATGA
____________________________________________________________
consensus CAAAAGCTTTCAGAAGAACCCTTCTTTCAAGACTCATCGATGCAGGCATCGTTAAAATGA
. : . : . : . : . : . :
JMFF010O02+ GTTTGTATCCTCTAGAAGCAGCAATAAAGGCCAGTCCAATGCCAGTGTTACCACTCGTAG
JMFF019J20+ GTAG
JMSF047I12+ GTTTGTATCCTCTAGAAGCAGCAATAAAGGCCAGTCCAATGCCAGTGTTACCACTCGTAG
____________________________________________________________
consensus GTTTGTATCCTCTAGAAGCAGCAATAAAGGCCAGTCCAATGCCAGTGTTACCACTCGTAG
. : . : . : . : . : . :
JMFF010O02+ GTTCCACCAAGACAGTCTTCCCTGGGGAGATAAGCCCCTTCTCCTCGGCATCAGCTATCA
JMSF015J11+ CATCAGCTATCA
JMFF019J20+ GTTCCACCAAGACAGTCTTCCCTGGGGAGATAAGCCCCTTCTCCTCGGCATCAGCTATCA
JMSF047I12+ GTTCCACCAAGACAGTCTTCCCTGGGGAGATAAGCCCCTTCTCCTCGGCATCAGCTATCA
____________________________________________________________
consensus GTTCCACCAAGACAGTCTTCCCTGGGGAGATAAGCCCCTTCTCCTCGGCATCAGCTATCA
. : . : . : . : . : . :
JMFF010O02+ TACTGAATCCTATCCTGTCCTTGACACTGCAACACGGCTCCATAATCTCAAGTTTGGCAG
JMSF015J11+ TACTGAATCCTATCCTGTCCTTGACANTGCAACACGGCTCCATAATCTCAAGTTTGGCAG
JMFF019J20+ TACTGAATCCTATCCTGTCCTTGACACTGCAACACGGCTCCATAATCTCAAGTTTGGCAG
JMSF047I12+ TACTGAATCCTATCCTGTCCTTGACACTGCAACACGGCTCCATAATCTCAAGTTTGGCAG
____________________________________________________________
consensus TACTGAATCCTATCCTGTCCTTGACACTGCAACACGGCTCCATAATCTCAAGTTTGGCAG
. : . : . : . : . : . :
JMFF010O02+ CAATATTTGCAACACAACCTTTTACAATAGTATTCAAGAACACCATTGGTGTGTTCCCTA
JMSF015J11+ CAATATTTGCAACACAACCTTTTACAATAGTATTCAAGAACACCATTGGTGTGTTCCCTA
JMFF019J20+ CAATATTTGCAACACAACCTTTTACAATAGTATTCAAGAACACCATTGGTGTGTTCCCTA
JMSF047I12+ CAATATTTGCAACACAACCTTTTACAATAGTATTCAAGAACACCATTGGTGTGTTCCCTA
____________________________________________________________
consensus CAATATTTGCAACACAACCTTTTACAATAGTATTCAAGAACACCATTGGTGTGTTCCCTA
. : . : . : . : . : . :
JMFF010O02+ TAAGCTGAGTAACATCCTCGGCGATGTTGAGTCCATCGATATGGGTAGTCGACGATGAGG
JMSF015J11+ TAAGCTGAGTAACATCCTNGGCGATGTTGAGTCCATCGATATGGGTAGTCGACGATGAGG
JMSF010M20+ GCTGAGTAACATCCTCGGCGATGNNGAGTCCATCGATATGGGTAGTCGACGATGAGG
JMFF019J20+ TAAGCTGAGTAACATCCTCGGCGATGTTGAGTCCATCGATATGGGTAGTCGACGATGAGG
JMFF023E01+ TGAGTCCATCGATANGGGTAGTCGACGATGAGG
JMSF047I12+ TAAGCTGAGTAACATCCTCGGCGATGTTGAGTCCATCGATATGGGTAGTCGACGATGAGG
____________________________________________________________
consensus TAAGCTGAGTAACATCCTCGGCGATGTTGAGTCCATCGATATGGGTAGTCGACGATGAGG
. : . : . : . : . : . :
JMFF010O02+ GCTGATTCACAGACACGGCTTTGCAGGAAATCGCGGGGAAAGAAGCCTTTTTGACACTGA
JMSF015J11+ GCTGCTTCACAGACACGGCTTNGTAGGAAATCGCGGGGAAAGAAGCCTTTTNGACACTGA
JMSF010M20+ GNTGCTTCACAGACACGGCTNTGCAGGAAATCGCGGGGAAAGAAGCCTTTTTGACACTGA
JMFF019J20+ GCTGCTTCACAGACACGGCTTTGCAGGAAATCGCGGGGAAAGAAGCCTTTTTGACACTGA
JMSF015G04+ GGAAAGAAGCCTTTTTGACACTGA
JMFF023E01+ GCTGCTTCACAGACACGGCTTTGCAGGAAATCGCGGGGAAAGAAGCCTTTTTGACACTGA
JMSF047I12+ GCTGCTTCACAGACACGGCTTTGCAGGAAATCGCGGGGAAAGAAGCCTTTTTGACACTGA
____________________________________________________________
consensus GCTGCTTCACAGACACGGCTTTGCAGGAAATCGCGGGGAAAGAAGCCTTTTTGACACTGA
. : . : . : . : . : . :
JMFF010O02+ AATACTGGGCACCCAGACGACATCGTCTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
JMSF015J11+ AATACTGGGCACCCAGATGACATNGTCTGAAGAAATTAGNTTCGGGGCAGAGGTCGGGCT
JMSF010M20+ AATACTGGGCACCCAGACGACATCGTNTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
JMFF019J20+ AATACTGGGCACCCAGACGACATCGTCTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
JMSF015G04+ AATACTGGGCACCCAGACGACATCGTCTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
JMFF023E01+ AATACTGGGCACCCAGACGACATCGTCTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
JMSF047I12+ AATACTGGGCACCCAGACGACATCGTCTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
____________________________________________________________
consensus AATACTGGGCACCCAGACGACATCGTCTGAAGAAATTAGGTTCGGGGCAGAGGTCGGGCT
. : . : . : . : . : . :
JMFF010O02+ TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
JMSF015J11+ CGNCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
JMSF010M20+ TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
JMFF019J20+ TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
JMSF015G04+ TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
JMFF023E01+ TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
JMSF047I12+ TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
____________________________________________________________
consensus TGGCGGTGGCGTTGAAAGAGTTGCAGAGAGAAAAGGGTTTGTTGATGAGAGAAGCCATTG
. : . : . : . : . : . :
JMFF010O02+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTC
JMSF015J11+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGC
JMSF010M20+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGC
JMFF019J20+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGCGGCGAGACTATCAAAAGCTT
JMSF015G04+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGCGGCGAGACTATCAAAAGCTT
JMFF023E01+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGCGGCGAGACTATCAAAAGCTT
JMSF047I12+ ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGCGGCGAGACTATCAAAAGCTT
____________________________________________________________
consensus ATTCTCTCTCTATCTATCTCTCTCTTTCCAGATTCAGAGCGGCGAGACTATCAAAAGCTT
. : . : . : . : . : . :
JMFF019J20+ CACTGGTTTTATCTT
JMSF015G04+ CACTGGTTTTATCTTCGCGTTTCAGTTTTGGAT
JMFF023E01+ CACTGGTTTTATCTTCGCGTTTCAGTTTTGGATTTTTATCGAAAGGGTATCTG
JMSF047I12+ CACTGGTTTTATCTTCGCGTTTCAGTTTTGGATTTTTATCGAAAGGGTATCTGTCTAGTC
____________________________________________________________
consensus CACTGGTTTTATCTTCGCGTTTCAGTTTTGGATTTTTATCGAAAGGGTATCTGTCTAGTC