Contig 010899:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B06Sequence355010899 (3)741013943 (2)emb|CBI24767.3|5e-117unnamed protein product [Vitis vinifera]
JMSF027K21Sequence658010899 (3)ref|XP_009631237.1|98.6PREDICTED: uncharacterized protein LOC104121047 [Nicotiana tomentosiformis]683013943 (2)emb|CBI24767.3|1e-117unnamed protein product [Vitis vinifera]
JMSF047F07Sequence609010899 (3)ref|XP_009631237.1|97.8PREDICTED: uncharacterized protein LOC104121047 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF027K21+                                           TCGGACTCAAAATCCAAGCCCTCCTCCA
                      ____________________________________________________________
consensus                                             TCGGACTCAAAATCCAAGCCCTCCTCCA
 
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JMSF027K21+           TTTTGGCAAGTCGGTTAACCTTTTCAATCTTAGATTTTCGCTTACTCTTCTTTTTCTTTT
JMSF047F07+                                                              TTTTTTTTT
                      ____________________________________________________________
consensus             TTTTGGCAAGTCGGTTAACCTTTTCAATCTTAGATTTTCGCTTACTCTTCTTTTTTTTTT
 
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JMSF027K21+           TCTTACTTCCACTAACCATATTCTTTATAACAGGGGTCAATCCTCTAGTCTCAATAGACT
JMSF047F07+           TCTTACTTCCACTAACCATATTCTTTATAACAGGGGTCAATCCTCTAGTCTCAATAGACT
                      ____________________________________________________________
consensus             TCTTACTTCCACTAACCATATTCTTTATAACAGGGGTCAATCCTCTAGTCTCAATAGACT
 
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JMSF027K21+           TAAGGGCAATCTTCCTAGCCTTCACACACCAATCCATGACCTCAGTGTCATGGAGCAATT
JMSF047F07+           TAAGGGCAATCTTCCTAGCCTTCACACACCAATCCATGACCTCAGTGTCATGGAGCAATT
                      ____________________________________________________________
consensus             TAAGGGCAATCTTCCTAGCCTTCACACACCAATCCATGACCTCAGTGTCATGGAGCAATT
 
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JMSF027K21+           GATTTTTCCCCTTCTTGGCCAATTCTCCCACAAACTTGGCCTCCCAATCCACACTCTCAG
JMSF047F07+           GATTTTTCCCCTTCTTGGCCAATTCTCCCACAAACTTGGCCTCCCAATCCACACTCTCAG
                      ____________________________________________________________
consensus             GATTTTTCCCCTTCTTGGCCAATTCTCCCACAAACTTGGCCTCCCAATCCACACTCTCAG
 
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JMSF027K21+           ATTCACCCCCGCTTACTTCACTAATTTCTTCATCTTCTTCAATTTCATCAATATCGTGAT
JMSF018B06+                                                     TTTCATCAANATCGTGAT
JMSF047F07+           ATTCACCCCCGCTTACTTCACTAATTTCTTCATCTTCTTCAATTTCATCAATATCGTGAT
                      ____________________________________________________________
consensus             ATTCACCCCCGCTTACTTCACTAATTTCTTCATCTTCTTCAATTTCATCAATATCGTGAT
 
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JMSF027K21+           TCAAACTCTTAGCACCTAAAGCATTGCACTTTCTAGATGGGTTCGTGGAGCTAGTGATAT
JMSF018B06+           TCAAACTCTTAGCACCTAAAGCATTGCACTTTCTAGATGGGTTCGTGGAGCTAGTGATAT
JMSF047F07+           TCAAACTCTTAGCACCTAAAGCATTGCACTTTCTAGATGGGTTCGTGGAGCTAGTGATAT
                      ____________________________________________________________
consensus             TCAAACTCTTAGCACCTAAAGCATTGCACTTTCTAGATGGGTTCGTGGAGCTAGTGATAT
 
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JMSF027K21+           GGAAAAGGAGAGCCGAGTTGGAAGAAAGTTTGAGTCTTGGACTAGTAATAGGAAATGCAG
JMSF018B06+           GGAAAAGGAGAGCCGAGTTGGAAGAAAGTTTGAGTCTTGGACTAGTAATAGGAAATGCAG
JMSF047F07+           GGAAAAGGAGAGCCGAGTTGGAAGAAAGTTTGAGTCTTGGACTAGTAATAGGAAATGCAG
                      ____________________________________________________________
consensus             GGAAAAGGAGAGCCGAGTTGGAAGAAAGTTTGAGTCTTGGACTAGTAATAGGAAATGCAG
 
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JMSF027K21+           TTTTTGGAGTCTCAAAGAAGAGATAACCTGTTGGTACGGAAAGAAGGGGCCTCTGGAAGC
JMSF018B06+           TTTTTGGAGTCTCAAAGAAGAGATAACCTGTTGGTACGGAAAGAAGGGGCCTCTGGAAGC
JMSF047F07+           TTTTTGGAGTCTCAAAGAAGAGATAACCTGTTGGTACGGAAAGAAGGGGCCTCTGGAAGC
                      ____________________________________________________________
consensus             TTTTTGGAGTCTCAAAGAAGAGATAACCTGTTGGTACGGAAAGAAGGGGCCTCTGGAAGC
 
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JMSF027K21+           TTAAGAATGAGTTGAGCAACGCTGTTTCCATGGCTGCTAGCTATGCCAGATTTTTAAACC
JMSF018B06+           TTAAGAATGAGTTGAGCAACGCTGTTTCCATGGCTGCTAGCTATGCCAGATTTTTAAACC
JMSF047F07+           TTAAGAATGAGTTGAGCAACGCTGTTTCCATGGCTGCTAGCTATGCCAGATTTTTAAACC
                      ____________________________________________________________
consensus             TTAAGAATGAGTTGAGCAACGCTGTTTCCATGGCTGCTAGCTATGCCAGATTTTTAAACC
 
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JMSF027K21+           CTAAATCCGTAAAACAAATGGGGGTTTTTGCGAAAATGGTAAAGAAATTAGAGACTCACC
JMSF018B06+           CTAAATCCGTAAAACAAATGGGGGTTTTTGCGAAAATGGTAAAGAAATTAGAGACTCACC
JMSF047F07+           CTAAATCCGTAAAACAAATGGGGGTTTTTGCGAAAATGGTAAAGAAATTAGAGACTCACC
                      ____________________________________________________________
consensus             CTAAATCCGTAAAACAAATGGGGGTTTTTGCGAAAATGGTAAAGAAATTAGAGACTCACC
 
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JMSF027K21+           GGAATCTGCTTTGTAGAGATATGAGATT                                
JMSF018B06+           GGAATCTGCTTTGTAGAGATATGAGATT                                
JMSF047F07+           GGAATCTGCTTTGTAGAGATATGAGATTCAAAGATTGTAGTATTAGTACCAGTTTCATGG
                      ____________________________________________________________
consensus             GGAATCTGCTTTGTAGAGATATGAGATTCAAAGATTGTAGTATTAGTACCAGTTTCATGG