Contig 010886:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045M01-                                                          AGATGGCTTAGG
                      ____________________________________________________________
consensus                                                             AGATGGCTTAGG
 
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rJMSF045M01-          AAAATCCACATCTTTTGGAGCACCTAGTGCCAGCCCCAAGATCAAGTGCCTCTGCAGAAT
                      ____________________________________________________________
consensus             AAAATCCACATCTTTTGGAGCACCTAGTGCCAGCCCCAAGATCAAGTGCCTCTGCAGAAT
 
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rJMSF045M01-          GGTGATGATTTGATGAAGTCTTGCATTTAACTTGATCACCATCATCATTAATAGTTGTCA
                      ____________________________________________________________
consensus             GGTGATGATTTGATGAAGTCTTGCATTTAACTTGATCACCATCATCATTAATAGTTGTCA
 
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rJMSF045M01-          TCATCATCACCCTCATCTCTTGATCATCATCTCCAAATGAATTGAGGTCTATCAACGAAT
                      ____________________________________________________________
consensus             TCATCATCACCCTCATCTCTTGATCATCATCTCCAAATGAATTGAGGTCTATCAACGAAT
 
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rJMSF045M01-          GCACATTTTCTTGATCATCTTCATGGTTTGCTTTGTGGTTATGGCTCCTTACCATGTCAA
JMSF045M01+                           ATCTTCATGGTTTGCTTTGTGGTTATGGCTCCTTACCATGTCAA
                      ____________________________________________________________
consensus             GCACATTTTCTTGATCATCTTCATGGTTTGCTTTGTGGTTATGGCTCCTTACCATGTCAA
 
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rJMSF045M01-          AGAGGCTTGCACGACGCTTCTTGTGGTTGAGGCTTGCTAGTCTAAGAAAATACTTTTGAG
JMSF045M01+           AGAGGCTTGCACGACGCTTCTTGTGGTTGAGGCTTGCTAGTCTAAGAAAATACTTTTGAG
                      ____________________________________________________________
consensus             AGAGGCTTGCACGACGCTTCTTGTGGTTGAGGCTTGCTAGTCTAAGAAAATACTTTTGAG
 
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rJMSF045M01-          CATGGCTAGCAACTTGGGTTGGAGTCCTTGTACTTACAAACTTTCTTGAAATTCCTCTCC
JMSF045M01+           CATGGCTAGCAACTTGGGTTGGAGTCCTTGTACTTACAAACTTTCTTGAAATTCCTCTCC
                      ____________________________________________________________
consensus             CATGGCTAGCAACTTGGGTTGGAGTCCTTGTACTTACAAACTTTCTTGAAATTCCTCTCC
 
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rJMSF045M01-          AATCTCCCTTTCCTAGTTTTTCTAGTCCATTCATGAAGTTTCTGTGCTCCTTTTCTGTCC
JMSF045M01+           AATCTCCCTTTCCTAGTTTTTCTAGTCCATTCATGAAGTTTCTGTGCTCCTTTTCTGTCC
                      ____________________________________________________________
consensus             AATCTCCCTTTCCTAGTTTTTCTAGTCCATTCATGAAGTTTCTGTGCTCCTTTTCTGTCC
 
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rJMSF045M01-          ATGGAACTCCTTTCCTCTTCTCCTGAGCTTTGCCAATGAGACCATCAGAGAGATATCCAT
JMSF045M01+           ATGGAACTCCTTTCCTCTTCTCCTGAGCTTTGCCAATGAGACCATCAGAGAGATATCCAT
                      ____________________________________________________________
consensus             ATGGAACTCCTTTCCTCTTCTCCTGAGCTTTGCCAATGAGACCATCAGAGAGATATCCAT
 
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rJMSF045M01-          TAATGGATGTTTTTATTTCACAGTTTTCATGAACAGAAACTAGCGTGGAAGAGTGGGGAG
JMSF045M01+           TAATGGATGTTTTTATTTCACAGTTTTCATGAACAGAAACTAGCGTGGAAGAGTGGGGAG
                      ____________________________________________________________
consensus             TAATGGATGTTTTTATTTCACAGTTTTCATGAACAGAAACTAGCGTGGAAGAGTGGGGAG
 
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rJMSF045M01-          ATGAAGAAGGAGAAGAAGAGAGGCAATCCAAGCTCAAACTTTTCTTCATTGCAATAGAAG
JMSF045M01+           ATGAAGAAGGAGAAGAAGAGAGGCAATCCAAGCTCAAACTTTTCTTCATTGCAATAGAAG
                      ____________________________________________________________
consensus             ATGAAGAAGGAGAAGAAGAGAGGCAATCCAAGCTCAAACTTTTCTTCATTGCAATAGAAG
 
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rJMSF045M01-          AGTTGGTTGAAGAAGAAGAA                                        
JMSF045M01+           AGTTGGTTGAAGAAGAAGAAGGAGAAGAGCATAGAGAAGAAGAAGAAGAGATTTCAAGCT
                      ____________________________________________________________
consensus             AGTTGGTTGAAGAAGAAGAAGGAGAAGAGCATAGAGAAGAAGAAGAAGAGATTTCAAGCT
 
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JMSF045M01+           GAACTCCAAACAACCTTAATCCTCCAACAACAACATTATTATTAGTGTTACTAATAATAC
                      ____________________________________________________________
consensus             GAACTCCAAACAACCTTAATCCTCCAACAACAACATTATTATTAGTGTTACTAATAATAC
 
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JMSF045M01+           AACCTTTGACAGTGGTGCACGTTCTTGAATTGTGACCTGTGATCCCACATTTTGAACACT
                      ____________________________________________________________
consensus             AACCTTTGACAGTGGTGCACGTTCTTGAATTGTGACCTGTGATCCCACATTTTGAACACT
 
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JMSF045M01+           TTCTGCCCATTTTCACACAGACAAAGATCTGCAGAGAGCTTACCTTAGCTTCCTAAATTG
                      ____________________________________________________________
consensus             TTCTGCCCATTTTCACACAGACAAAGATCTGCAGAGAGCTTACCTTAGCTTCCTAAATTG
 
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JMSF045M01+           CAAAACCAGAAAATGAAGGAAATGAGCTTTGAGGAATTAATGGGGTGTGGGAGAGGGACC
                      ____________________________________________________________
consensus             CAAAACCAGAAAATGAAGGAAATGAGCTTTGAGGAATTAATGGGGTGTGGGAGAGGGACC