Contig 010882:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS166A04Sequence605010882 (3)ref|XP_009777752.1|1e-48PREDICTED: uncharacterized protein LOC104227242 isoform X1 [Nicotiana sylvestri
JMSF038A08Sequence662010882 (3)ref|XP_009777752.1|2e-80PREDICTED: uncharacterized protein LOC104227242 isoform X1 [Nicotiana sylvestri847020469ref|XP_009777752.1|1e-66PREDICTED: uncharacterized protein LOC104227242 isoform X1 [Nicotiana sylvestri
JMSF045H11Sequence688010882 (3)ref|XP_009777753.1|1e-52PREDICTED: uncharacterized protein LOC104227242 isoform X2 [Nicotiana sylvestri867021573emb|CBI15292.3|4e-92unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF038A08+                          CTGAAGACAATGTAGTAGTCAGCCACGGTAGGAATTCTTCCAGCA
                      ____________________________________________________________
consensus                            CTGAAGACAATGTAGTAGTCAGCCACGGTAGGAATTCTTCCAGCA
 
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JMSF038A08+           GAATAATAGGAACACTACACAGATACTGCCATACAAGCTTAGCCTGTTCTTTGGGAGAAA
                      ____________________________________________________________
consensus             GAATAATAGGAACACTACACAGATACTGCCATACAAGCTTAGCCTGTTCTTTGGGAGAAA
 
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JMSF038A08+           AATGCTGCACCAACAAAGGAAAAATCTGCTCTTCTTCTTTCAGCATATGCTGACTCATGA
JMFS166A04+                                                              GACTCATGA
JMSF045H11+                                           TCTTCTTTCAGCATATGCTGACTCATGA
                      ____________________________________________________________
consensus             AATGCTGCACCAACAAAGGAAAAATCTGCTCTTCTTCTTTCAGCATATGCTGACTCATGA
 
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JMSF038A08+           TGGTCCACAAAGTACCTATGCAAATTATAAGTTCTTTAAACAAATTGAGCAAAGTTTCAC
JMFS166A04+           TGGTCCACAAAGTACCTATGCAAATTATAAGTTCTTTAAACAAATTGAGCAAAGTTTCAC
JMSF045H11+           TGGTCCACAAAGTACCTATGCAAATTATAAGTTCTTTAAACAAATTGAGCAAAGTTTCAC
                      ____________________________________________________________
consensus             TGGTCCACAAAGTACCTATGCAAATTATAAGTTCTTTAAACAAATTGAGCAAAGTTTCAC
 
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JMSF038A08+           TTTCCTTCTTCAGGAGATCCAAGTAATGGAAGATAGAAACAAACAGATCATCTATGCTTC
JMFS166A04+           TTTCCTTCTTCAGGAGATCCAAGTAATGGAAGATAGAAACAAACAGATCATCTATGCTTC
JMSF045H11+           TTTCCTTCTTCAGGAGATCCAAGTAATGGAAGATAGAAACAAACAGATCATCTATGCTTC
                      ____________________________________________________________
consensus             TTTCCTTCTTCAGGAGATCCAAGTAATGGAAGATAGAAACAAACAGATCATCTATGCTTC
 
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JMSF038A08+           TATGTTCGAGTGAATATGTACAAACCACATTCTTCACATGTGCATCTAGTGCAAGAAAGA
JMFS166A04+           TATGTTCGAGTGAATATGTACAAACCACATTCTTCACATGTGCATCTAGTGCAAGAAAGA
JMSF045H11+           TATGTTCGAGTGAATATGTACAAACCACATTCTTCACATGTGCATCTAGTGCAAGAAAGA
                      ____________________________________________________________
consensus             TATGTTCGAGTGAATATGTACAAACCACATTCTTCACATGTGCATCTAGTGCAAGAAAGA
 
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JMSF038A08+           TGACCTCATCTTCTGCAGCACAATGGTATTTACAGACTAGTTTCAAGAAGTCAAACCTCC
JMFS166A04+           TGACCTCATCTTCTGCAGCACAATGGTATTTACAGACTAGTTTCAAGAAGTCAAACCTCC
JMSF045H11+           TGACCTCATCTTCTGCAGCACAATGGTATTTACAGACTAGTTTCAAGAAGTCAAACCTCC
                      ____________________________________________________________
consensus             TGACCTCATCTTCTGCAGCACAATGGTATTTACAGACTAGTTTCAAGAAGTCAAACCTCC
 
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JMSF038A08+           TTCTAAGCTCGTCAACGAGGTCAAGGCCAAGGGACCCATTCCCCGAGGCGGCCTCCACCG
JMFS166A04+           TTCTAAGCTCGTCAACGAGGTCAAGGCCAAGGGACCCATTCCCCGAGGCGGCCTCCACCG
JMSF045H11+           TTNTAAGCTCGTCAACGAGGTCAAGGCCAAGGGACCCATTCCCCGAGGCGGCCTCCACCG
                      ____________________________________________________________
consensus             TTCTAAGCTCGTCAACGAGGTCAAGGCCAAGGGACCCATTCCCCGAGGCGGCCTCCACCG
 
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JMSF038A08+           CCACGCGGCGGAGCTGAGCTAGCTCAGATCTCAGGGCCTTATGAAAAACAGCGAGGAAAA
JMFS166A04+           CCACGCGGCGGAGCTGAGCTAGCTCAGATCTCAGGGCCTTATGAAAAACAGCGAGGAAAA
JMSF045H11+           CCACGCGGCGGAGCTGAGCTAGCTCAGATCTCAGGGCCTTATGAAAAACAGCGAGGAAAA
                      ____________________________________________________________
consensus             CCACGCGGCGGAGCTGAGCTAGCTCAGATCTCAGGGCCTTATGAAAAACAGCGAGGAAAA
 
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JMSF038A08+           GAATCGGGGAGTCAACCAGCTTGAGAGCAGCAAGTGAAGGCGACAGGAAATCCTCCTCCG
JMFS166A04+           GAATCGGGGAGTCAACCAGCTTGAGAGCAGCAAGTGAAGGCGACAGGAAATCCTCCTCCG
JMSF045H11+           GAATCGGGGAGTCAACCAGCTTGAGAGCAGCAAGTGAAGGCGACAGGAAATCCTCCTCCG
                      ____________________________________________________________
consensus             GAATCGGGGAGTCAACCAGCTTGAGAGCAGCAAGTGAAGGCGACAGGAAATCCTCCTCCG
 
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JMSF038A08+           TCTCGGGTTCTCCGCCGCCCATTTTCAGACGCAGCGCCACCACCACCACCACCTATCATC
JMFS166A04+           TCTCGGGTTCTCCGCCGCCCATTTTCAGACGCAGCGCCACCACCACCACCACCTATCATC
JMSF045H11+           TCTCGGGTTCTCCGCCGCCCATTTTCAGACGCAGCGCCACCACCACCACCACCTATCATC
                      ____________________________________________________________
consensus             TCTCGGGTTCTCCGCCGCCCATTTTCAGACGCAGCGCCACCACCACCACCACCTATCATC
 
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JMSF038A08+           AACGGCGAGAGAGAC                                             
JMFS166A04+           AACGGCGAGAGAGACCAAAGGGGAAGCTTCAACATTGAAGGTGGAGGAGTATATATGGGT
JMSF045H11+           AACGGCGAGAGAGACCAAAGGGGAAGCTTCAACATTGAAGGTGGAGGAGTATATATGGGT
                      ____________________________________________________________
consensus             AACGGCGAGAGAGACCAAAGGGGAAGCTTCAACATTGAAGGTGGAGGAGTATATATGGGT
 
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JMFS166A04+           GCTTGTGGGCTCTCACAGTCTTGTTTTTTTTTGTGCAAGAAGGCGTTGTTGGTGCC    
JMSF045H11+           GCTTGTGGGCTCTCACAGTCTTGTTTTTTTTTGTGCAAGAAGGCGTTGTTGGTGCCTCTC
                      ____________________________________________________________
consensus             GCTTGTGGGCTCTCACAGTCTTGTTTTTTTTTGTGCAAGAAGGCGTTGTTGGTGCCTCTC
 
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JMSF045H11+           CCATGTCCAAATCGCAATTTTTTTGGGAATTTAAAAATTGGGTTTTGGGTTTTTGCGATC
                      ____________________________________________________________
consensus             CCATGTCCAAATCGCAATTTTTTTGGGAATTTAAAAATTGGGTTTTGGGTTTTTGCGATC