Contig 010879:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS030D01Sequence627010879 (5)ref|XP_009624861.1|5e-10PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic [Nicotiana to
JMFS129A06Sequence608010879 (5)ref|XP_009775646.1|5e-23PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic [Nicotiana sy
JMFS163A06Sequence606010879 (5)ref|XP_009624861.1|2e-10PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic [Nicotiana to
JMSF029D21Sequence746010879 (5)emb|CDP06327.1|3e-10unnamed protein product [Coffea canephora]694002977 (2)ref|XP_009775646.1|2e-118PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic [Nicotiana sy
JMSF045C04Sequence784010879 (5)ref|XP_009624861.1|4e-10PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic [Nicotiana to743002977 (2)ref|XP_009630189.1|3e-59PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic [Nicotiana to

Alignment

This contig is upended


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JMFS129A06+                            TGCTAGCTTCATCTNTAAGGCATTGATCTCACCCTGCAAAGCT
                      ____________________________________________________________
consensus                              TGCTAGCTTCATCTNTAAGGCATTGATCTCACCCTGCAAAGCT
 
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JMFS129A06+           TCTTTTTCACCAATAATTTTTCCAAGATCTTCAAGTGCATGGATACGAGCTTTATTAAGA
                      ____________________________________________________________
consensus             TCTTTTTCACCAATAATTTTTCCAAGATCTTCAAGTGCATGGATACGAGCTTTATTAAGA
 
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JMFS129A06+           ATATAAATATTCTTTTCAGCATTTCTTATCATGCCAACCAAATCCTGAAGTTGAATGCTT
                      ____________________________________________________________
consensus             ATATAAATATTCTTTTCAGCATTTCTTATCATGCCAACCAAATCCTGAAGTTGAATGCTT
 
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JMFS129A06+           GCCTTTTCCCCATTTGCATCGACAGACAAAGATTTAATCTCATCTAGAAGAACCATACTA
JMSF045C04+                                                                   ACTA
                      ____________________________________________________________
consensus             GCCTTTTCCCCATTTGCATCGACAGACAAAGATTTAATCTCATCTAGAAGAACCATACTA
 
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JMFS129A06+           TTTGCTCTTTCCTCATCTGAACTCTCACCTTCTGTCATGGTATCAATACTTCCTTCAGCT
JMSF045C04+           TTTGCTCTTTCCTCATCTGAACTCTCAGCTTCTGTCATGGTATCAATACTTCCTTCAGCT
                      ____________________________________________________________
consensus             TTTGCTCTTTCCTCATCTGAACTCTCAGCTTCTGTCATGGTATCAATACTTCCTTCAGCT
 
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JMFS129A06+           TTTGTTTCTTCATTTGAAATTGGTATGCTATTAACTTCTTTCTCATCAAAACTCTCGCCA
JMFS030D01+                                            ACTTCTTTCTCATCAAAACTCTCGCCA
JMSF029D21+                                            ACTTCTTTCTCATCAAAACTCTCGCCA
JMSF045C04+           TTTGTTTCTTCATTTGAAATTGGTATGCTATTAACTTCTTTCTCATCAAAACTCTCGCCA
                      ____________________________________________________________
consensus             TTTGTTTCTTCATTTGAAATTGGTATGCTATTAACTTCTTTCTCATCAAAACTCTCGCCA
 
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JMFS129A06+           TCTGTCATGTTATCATTACTTCCCTCAGCTTTTGTTTCTTCATTTGAAATTGGTACGCTA
JMFS163A06+                                                  TCATTTGAAATTGGTACGCTA
JMFS030D01+           TCTGTCATGTANTCATTACTTCCCTCAGCTTTTGTTTCTTCATTTGAAATTGGTACGCTA
JMSF029D21+           TCTGTCATGTTATCATTACTTCCCTCAGCTTTTGTTTCTTCATTTGAAATTGGTACGCTA
JMSF045C04+           TCTGTCATGTTATCATTACTTCCCTCAGCTTTTGTTTCTTCATTTGAAATTGGTACGCTA
                      ____________________________________________________________
consensus             TCTGTCATGTTATCATTACTTCCCTCAGCTTTTGTTTCTTCATTTGAAATTGGTACGCTA
 
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JMFS129A06+           TTAGCTCCTTTCTCACCAAAACTCCCAGCTTCTGTCAGAATATCATTTCCTTCAGACGTT
JMFS163A06+           TTAGCTCCTTTCTCACCAAAACTCCCAGCTTCTGTCAGAATATCATTTCCTTCAGACGTT
JMFS030D01+           TTAGCTCCTTTCTCACCAAAACTCCCAGCTTCTGTCAGAATATCATTTCCTTCAGACGTT
JMSF029D21+           TTAGCTCCTTTCTCACCAAAACTCCCAGCTTCTGTCAGAATATCATTTCCTTCAGACGTT
JMSF045C04+           TTAGCTCCTTTCTCACCAAAACTCCCAGCTTCTGTCAGAATATCATTTCCTTCAGACGTT
                      ____________________________________________________________
consensus             TTAGCTCCTTTCTCACCAAAACTCCCAGCTTCTGTCAGAATATCATTTCCTTCAGACGTT
 
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JMFS129A06+           ATTTCTTCTTTTGAAATTGGTAGACTATTTGCTTCTTTCACATCAGGACTCTCAGCTTCT
JMFS163A06+           ATTTCTTCTTTTGAAATTGGTAGACTATTTGCTTCTTTCACATCAGGACTCTCAGCTTCT
JMFS030D01+           ATTTCTTCTTTTGAAATTGGTAGACTATTTGCTTCTTTCACATCAGGACTCTCAGCTTCT
JMSF029D21+           ATTTCTTCTTTTGAAATTGGTAGACTATTTGCTTCTTTCACATCAGGACTCTCAGCTTCT
JMSF045C04+           ATTTCTTCTTTTGAAATTGGTAGACTATTTGCTTCTTTCACATCAGGACTCTCAGCTTCT
                      ____________________________________________________________
consensus             ATTTCTTCTTTTGAAATTGGTAGACTATTTGCTTCTTTCACATCAGGACTCTCAGCTTCT
 
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JMFS129A06+           GTCACAGCGACAATATTCCCTTCAGCTATTGTTTCTTCATTTGAAATTGGTAGACTATTT
JMFS163A06+           GTCACAGCGACAATATTCCCTTCAGCTATTGTTTCTTCATTTGAAATTGGTAGACTATTT
JMFS030D01+           GTCACAGCGACAATATTCCCTTCAGCTATTGTTTCTTCATTTGAAATTGGTAGACTATTT
JMSF029D21+           GTCACAGCGACAATATTCCCTTCAGCTATTGTTTCTTCATTTGAAATTGGTAGACTATTT
JMSF045C04+           GTCACAGCGACAATATTCCCTTCAGCTATTGTTTCTTCATTTGAAATTGGTAGACTATTT
                      ____________________________________________________________
consensus             GTCACAGCGACAATATTCCCTTCAGCTATTGTTTCTTCATTTGAAATTGGTAGACTATTT
 
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JMFS129A06+           GCTTCTTTCAAATCTGGACTCTCAG                                   
JMFS163A06+           GCTTCTTTCAAATCTGGACTCTCAGCTTCTGTCACAGCGACAATATTCCCTTCAGCTATT
JMFS030D01+           GCTTCTTTCAAATCTGGACTCTCAGCTTCTGTCACAGCGACAATATTCCCTTCAGCTATT
JMSF029D21+           GCTTCTTTCAAATCTGGACTCTCAGCTTCTGTCACAGCGACAATATTCCCTTCAGCTATT
JMSF045C04+           GCTTCTTTCAAATCTGGACTCTCAGCTTCTGTCACAGCGACAATATTCCCTTCAGCTATT
                      ____________________________________________________________
consensus             GCTTCTTTCAAATCTGGACTCTCAGCTTCTGTCACAGCGACAATATTCCCTTCAGCTATT
 
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JMFS163A06+           GTTTCTTCATTTGAAACTGGTAAACTATCATCCAAGGCATTTTCTGGATCACCTTCAACA
JMFS030D01+           GTTTCTTCATTTGAAACTGGTAAACTATCATCCAAGGCATTTTCTGGATCACCTTCAACA
JMSF029D21+           GTTTCTTCATTTGAAACTGGTAAACTATCATCCAAGGCATTTTCTGGATCACCTTCAACA
JMSF045C04+           GTTTCTTCATTTGAAACTGGTAAACTATCATCCAAGGCATTTTCTGGATCACCTTCAACA
                      ____________________________________________________________
consensus             GTTTCTTCATTTGAAACTGGTAAACTATCATCCAAGGCATTTTCTGGATCACCTTCAACA
 
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JMFS163A06+           CTGGTTGACCGAATATCTGTGTTTGTTGGACGTTCCAAACTGATCTTCTTGTGTCGTTGC
JMFS030D01+           CTGGTTGACCGAATATCTGTGTTTGTTGGACGTTCCAAACTGATCTTCTTGTGTCGTTGC
JMSF029D21+           CTGGTTGACCGAATATCTGTGTTTGTTGGACGTTCCAAACTGATCTTCTTGTGTCGTTGC
JMSF045C04+           CTGGTTGACCGAATATCTGTGTTTGTTGGACGTTCCAAACTGATCTTCTTGTGTCGTTGC
                      ____________________________________________________________
consensus             CTGGTTGACCGAATATCTGTGTTTGTTGGACGTTCCAAACTGATCTTCTTGTGTCGTTGC
 
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JMFS163A06+           CTCTTATTTTGCAAGCTGAAATGGCGCTGGCGAGTCTTGCAGGAAACAGGGAGCGAGGGA
JMFS030D01+           CTCTTATTTTGCAAGCTGAAATGGCGCTGGCGAGTCTTGCAGGAAACAGGGAGCGAGGGA
JMSF029D21+           CTCTTATTTTGCAAGCTGAAATGGCGCTGGCGAGTCTTGCAGGAAACAGGGAGCGAGGGA
JMSF045C04+           CTCTTATTTTGCAAGCTGAAATGGCGCTGGCGAGTCTTGCAGGAAACAGGGAGCGAGGGA
                      ____________________________________________________________
consensus             CTCTTATTTTGCAAGCTGAAATGGCGCTGGCGAGTCTTGCAGGAAACAGGGAGCGAGGGA
 
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JMFS163A06+           TGGGGACGGAGGGGGAAGAATAATCGCGTATTGAATTGCTTGCCAAAGAGGCGGCGTCCT
JMFS030D01+           TGGGGACGGAGGGGGAAGAATAATCGCGTATTGAATTGCTTGCCAAAGAGGCGGCGTCCT
JMSF029D21+           TGGGGACGGAGGGGGAAGAATAATCGCGTATTGAATTGCTTGCCAAAGAGGCGGCGTCCT
JMSF045C04+           TGGGGACGGAGGGGGAAGAATAATCGCGTATTGAATTGCTTGCCAAAGAGGCGGCGTCCT
                      ____________________________________________________________
consensus             TGGGGACGGAGGGGGAAGAATAATCGCGTATTGAATTGCTTGCCAAAGAGGCGGCGTCCT
 
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JMFS163A06+           CCTCCGGCTCCGGCCCCGGCTCCGGCAGCGGCCGTCCATCTATGGCCGAGAAAAGTTGTA
JMFS030D01+           CCTCCGGCTCCGGCCCCGGCTCCGGCAGCGGCCGTCCATC                    
JMSF029D21+           CCTCCGGCTCCGGCCCCGGCTCCGGCAGCGGCCGTCCATCTATGGCCGAGAAAAGTTGTA
JMSF045C04+           CCTCCGGCTCCGGCCCCGGCTCCGGCAGCGGCCGTCCATCTATGGCCGAGAAAAGTTGTA
                      ____________________________________________________________
consensus             CCTCCGGCTCCGGCCCCGGCTCCGGCAGCGGCCGTCCATCTATGGCCGAGAAAAGTTGTA
 
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JMFS163A06+           GATAGCCTTGCCTCCATTGGAAGAGTAACGGAGGAATAAAACGGT               
JMSF029D21+           GATAGCCTTGCCTCCATTGGAAGAGTAACGGAGGAATAAAACGGT               
JMSF045C04+           GATAGCCTTGCCTCCATTGGAAGAGTAACGGAGGAATAAAACGGTTCCTTAGAACCAATC
                      ____________________________________________________________
consensus             GATAGCCTTGCCTCCATTGGAAGAGTAACGGAGGAATAAAACGGTTCCTTAGAACCAATC