| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS077A11 | Sequence | 627 | 010876 (5) | ref|XP_011074892.1| | 1e-101 | PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X2 [Sesa | |||||
| JMSF009A02 | Sequence | 300 | 010876 (5) | emb|CBI19087.3| | 2e-36 | unnamed protein product [Vitis vinifera] | 782 | 004329 (4) | ref|XP_009799724.1| | 7e-41 | PREDICTED: vacuolar protein sorting-associated protein 9A-like [Nicotiana sylve |
| JMSF033O12 | Sequence | 713 | 010876 (5) | ref|XP_009799724.1| | 3e-140 | PREDICTED: vacuolar protein sorting-associated protein 9A-like [Nicotiana sylve | 700 | 004329 (4) | ref|XP_009799724.1| | 2e-35 | PREDICTED: vacuolar protein sorting-associated protein 9A-like [Nicotiana sylve |
| JMSF037K19 | Sequence | 641 | 010876 (5) | ref|XP_011074892.1| | 3e-103 | PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X2 [Sesa | 656 | 004329 (4) | gb|EYU22898.1| | 8e-34 | hypothetical protein MIMGU_mgv1a005391mg [Erythranthe guttata] |
| JMSF044L04 | Sequence | 754 | 010876 (5) | ref|XP_011074892.1| | 1e-125 | PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X2 [Sesa | 686 | 004329 (4) | gb|EYU22898.1| | 8e-35 | hypothetical protein MIMGU_mgv1a005391mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF033O12+ TCAAATTCAGTTTCATCCATTGATAGTGCCT
____________________________________________________________
consensus TCAAATTCAGTTTCATCCATTGATAGTGCCT
. : . : . : . : . : . :
JMSF033O12+ TTGCATCAATGTTCATGATGAAAGACTCTGCAGAGAGAAGGTTTGTGAAGAAGTAGGCTG
____________________________________________________________
consensus TTGCATCAATGTTCATGATGAAAGACTCTGCAGAGAGAAGGTTTGTGAAGAAGTAGGCTG
. : . : . : . : . : . :
JMSF033O12+ CTTCTGAAACTAAGCGAGTTTGATGTCTAAACCGTTGTATGTATAATAAATTAGAATGCA
JMSF044L04+ CTAAACCGTNGTATGTATAATAAATTAGAATGCA
____________________________________________________________
consensus CTTCTGAAACTAAGCGAGTTTGATGTCTAAACCGTTGTATGTATAATAAATTAGAATGCA
. : . : . : . : . : . :
JMSF033O12+ GCTGGGGAGGGTTTGCCTTTATAGTGACATATATAAGAACAGGGAGAAAATCATCGGCTC
JMSF044L04+ GCTGGGGAGGGTTTGCCTTTATAGTGACATATATAAGAACAGGGAGAAAATCATCGGCTC
____________________________________________________________
consensus GCTGGGGAGGGTTTGCCTTTATAGTGACATATATAAGAACAGGGAGAAAATCATCGGCTC
. : . : . : . : . : . :
JMSF033O12+ CTGGAGGATTTTCATTAGCTGAAATGGAGGCATTTATCAAAAGATTATTGATAACCTTGC
JMFS077A11+ CTGAAATGGAGGCATTTATCAAAAGATTATTGATAACCTTGC
JMSF037K19+ CTGAAATGGAGGCATTTATCAAAAGATTATTGATAACCTTGC
JMSF044L04+ CTGGAGGATTTTCATTAGCTGAAATGGAGGCATTTATCAAAGGATTATTGATAACCTTGC
____________________________________________________________
consensus CTGGAGGATTTTCATTAGCTGAAATGGAGGCATTTATCAAAAGATTATTGATAACCTTGC
. : . : . : . : . : . :
JMSF033O12+ AACAATTAAGGATGCAAAGAAGTTTATCCCTTGGTGCCTTGTACATGTTGATTTTCAGTA
JMFS077A11+ AACAATTAAGGATGCAAAGAAGTTTATCCCTTGGTGCCTTGTACATGTTGATTTTCAGTA
JMSF037K19+ AACAATTAAGGATGCAAAGAAGTTTATCCCTTGGTGCCTTGTACATGTTGATTTTCAGTA
JMSF044L04+ AACAATTAAGGATGCAAAGAAGTTTATCCCTTGGTGCCTTGTACATGTTGATTTTCAGTA
____________________________________________________________
consensus AACAATTAAGGATGCAAAGAAGTTTATCCCTTGGTGCCTTGTACATGTTGATTTTCAGTA
. : . : . : . : . : . :
JMSF033O12+ ACTCCTTCTGAGCAAGCAGCCATGATGTTTCATTTTGAAAGACAGGCTTAATATCCAAAT
JMFS077A11+ ACTCCTTCTGAGCAAGCAGCCATGATGTTTCATTTTGAAAGACAGGCTTAATATCCAAAT
JMSF037K19+ ACTCCTTCTGAGCAAGCAGCCATGATGTTTCATTTTGAAAGACAGGCTTAATATCCAAAT
JMSF044L04+ ACTCCTTCTGAGCAAGCAGCCATGATGTTTCATTTTGAAAGACAGGCTTAATATCCAAAT
____________________________________________________________
consensus ACTCCTTCTGAGCAAGCAGCCATGATGTTTCATTTTGAAAGACAGGCTTAATATCCAAAT
. : . : . : . : . : . :
JMSF033O12+ TCTCCGGCCTGACAAACTGTTGAATCAAAGCAATCTTCTCATAAAGTTGGTCATCAACTT
JMFS077A11+ TCTCCGGCCTGACAAACTGTTGAATCAAAGCAATCTTCTCATAAAGTTGGTCATCAACTT
JMSF037K19+ TCTCCGGCCTGACAAACTGTTGAATCAAAGCAATCTTCTCATAAAGTTGGTCATCAACTT
JMSF044L04+ TCTCCGGCCTGACAAACTGTTGAATCAAAGCAATCTTCTCATAAAGTTGGTCATCAACTT
____________________________________________________________
consensus TCTCCGGCCTGACAAACTGTTGAATCAAAGCAATCTTCTCATAAAGTTGGTCATCAACTT
. : . : . : . : . : . :
JMSF033O12+ TTACATCTTCAGGATGTGAAGCAAAAACATGGGAAAACAGCTTTGTCATGACATATTTCT
JMFS077A11+ TTACATCTTCAGGATGTGAAGCAAAAACATGGGAAAACAGCTTTGTCATGACATATTTCT
JMSF037K19+ TTACATCTTCAGGATGTGAAGCAAAAACATGGGAAAACAGCTTTGTCATGACATATTTCT
JMSF044L04+ TTACATCTTCAGGATGTGAAGCAAAAACATGGGAAAACAGCTTTGTCATGACATATTTCT
____________________________________________________________
consensus TTACATCTTCAGGATGTGAAGCAAAAACATGGGAAAACAGCTTTGTCATGACATATTTCT
. : . : . : . : . : . :
JMSF033O12+ CCAGTCCTTCACCCGCACTCTCTAACTCCTCCTCAGAACAACCAGCCCACAGTGAATGAG
JMFS077A11+ CCAGTCCTTCACCCGCACTCTCTAACTCCTCCTCAGAACAACCAGCCCACAGTGAATGAG
JMSF037K19+ CCAGTCCTTCACCCGCACTCTCTAACTCCTCCTCAGAACAACCAGCCCACAGTGAATGAG
JMSF009A02+ GAATGAG
JMSF044L04+ CCAGTCCTTCACCCGCACTCTCTAACTCCTCCTCAGAACAACCAGCCCACAGTGAATGAG
____________________________________________________________
consensus CCAGTCCTTCACCCGCACTCTCTAACTCCTCCTCAGAACAACCAGCCCACAGTGAATGAG
. : . : . : . : . : . :
JMSF033O12+ CTCGAAAAGCAGCTTCCATGTTGCCAAGGAACTCCTGCACAGCTTTACTATCCCTTTCTG
JMFS077A11+ CTCGAAAAGCAGCTTCCATGTTGCCAAGGAACTCCTGCACAGCTTTACTATCCCTTTCTG
JMSF037K19+ CTCGAAAAGCAGCTTCCATGTTGCCAAGGAACTCCTGCACAGCTTTACTATCCCTTTCTG
JMSF009A02+ CTCGAAAAGCAGCTTCCATGTTGCCAAGGAACTCCTGCACAGCTTTACTATCCCTTTCTG
JMSF044L04+ CTCGAAAAGCAGCTTCCATGTTGCCAAGGAACTCCTGCACAGCTTTACTATCCCTTTCTG
____________________________________________________________
consensus CTCGAAAAGCAGCTTCCATGTTGCCAAGGAACTCCTGCACAGCTTTACTATCCCTTTCTG
. : . : . : . : . : . :
JMSF033O12+ GATCAGGAGCATTGTTTGAAAATGATACTATGAAACTTTTGATGGCTTTGACAAAATCGG
JMFS077A11+ GATCAGGAGCATTGTTTGAAAATGATACTATGAAACTTTTGATGGCTTTGACAAAATCGG
JMSF037K19+ GATCAGGAGCATTGTTTGAAAATGATACTATGAAACTTTTGATGGCTTTGACAAAATCGG
JMSF009A02+ GATCAGGAGCATTGTTTGAAAATGATACTATGAAACTTTTGATGGCTTTGACAAAATCGG
JMSF044L04+ GATCAGGAGCATTGTTTGAAAATGATACTATGAAACTTTTGATGGCTTTGACAAAATCGG
____________________________________________________________
consensus GATCAGGAGCATTGTTTGAAAATGATACTATGAAACTTTTGATGGCTTTGACAAAATCGG
. : . : . : . : . : . :
JMSF033O12+ CAGCGGAAGGCTGGCGCATGCG
JMFS077A11+ CAGCGGAAGGCTGGCGCATGCGCTCGAGGAAGTCGTGCCAAGTCAGAGGCGCCGTCGACG
JMSF037K19+ CAGCGGAAGGCTGGCGCATGCGCTCGAGGAAGTCGTGCCAAGTCAGAGGCGCCGTCGACG
JMSF009A02+ CAGCGGAAGGCTGGCGCATGCGCTCGAGGAAGTCGTGCCAAGTCAGAGGCGCCGTCGACG
JMSF044L04+ CAGCGGAAGGCTGGCGCATGCGCTCGAGGAAGTCGTGCCAAGTCAGAGGCGCCGTCGACG
____________________________________________________________
consensus CAGCGGAAGGCTGGCGCATGCGCTCGAGGAAGTCGTGCCAAGTCAGAGGCGCCGTCGACG
. : . : . : . : . : . :
JMFS077A11+ ATCCAAATACGTCGGCGTTCTCCATTGCTAGTCGGAGTCCGACCAGATCGACGGCTAAGA
JMSF037K19+ ATCCAAATACGTCGGCGTTCTCCATTGCTAGTCGGAGTCCGACCAGATCGACGGCTAAGA
JMSF009A02+ ATCCAAATACGTCGGCGTTCTCCATTGCTAGTCGGAGTCCGACCAGATCGACGGCTAAGA
JMSF044L04+ ATCCAAATACGTCGGCGTTCTCCATTGCTAGTCGGAGTCCGACCAGATCGACGGCTAAGA
____________________________________________________________
consensus ATCCAAATACGTCGGCGTTCTCCATTGCTAGTCGGAGTCCGACCAGATCGACGGCTAAGA
. : . : . : . : . : . :
JMFS077A11+ TTCCGTCGATGCTACAGTCTCAGGAGAGAGAAATAGTGAAATGAA
JMSF037K19+ TTCCGTCGATGATACAGTCTCAGGAGAGAGAAATAGTGAAATGAACGAGGC
JMSF009A02+ TTCCGTCGATGCTACAGTCTCAGGAGAGAGAAATAGTGAAATGAACGAGGC
JMSF044L04+ TTCCGTCGATGCTACAGTCTCAGGAGAGAGAAATAGTGAAATGAACGAGGCCAGACATTC
____________________________________________________________
consensus TTCCGTCGATGCTACAGTCTCAGGAGAGAGAAATAGTGAAATGAACGAGGCCAGACATTC