Contig 010872:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015A15Sequence691010872 (5)ref|XP_011082364.1|1e-80PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Ses
JMFF039J12Sequence563002042 (5)ref|XP_010275209.1|2e-93PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Nel752010872 (5)ref|XP_009609671.1|4e-98PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Nic
JMFF041P20Sequence651002042 (5)ref|XP_009609671.1|6e-94PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Nic586010872 (5)ref|XP_002278066.2|1e-70PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Vit
JMSF025J18Sequence667002042 (5)ref|XP_004244392.1|2e-96PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Sol709010872 (5)ref|XP_011082364.1|6e-89PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Ses
JMSF044A19Sequence509010872 (5)ref|XP_010677234.1|1e-52PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Bet

Alignment

This contig is upended


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rJMFF039J12+                                ACACATCTTTTANGAGGCCTGCAGTTGGGAAAAAAACT
                      ____________________________________________________________
consensus                                   ACACATCTTTTANGAGGCCTGCAGTTGGGAAAAAAACT
 
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rJMFF039J12+          GGTAAGCCAGGTGGCCTTGGTGCTCGAAACCTCATGACCAAGCCAAGTGAGAGTCTTTAT
rJMSF025J18+                                        CTCATGNCCAAGCCAAGTGAGAGTCTTTAT
                      ____________________________________________________________
consensus             GGTAAGCCAGGTGGCCTTGGTGCTCGAAACCTCATGACCAAGCCAAGTGAGAGTCTTTAT
 
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rJMFF039J12+          GACCAGAAACCTGAAGAAACGCCTGTTCAAGTCTCCCCCATCTCTGCAAGTGATACCCCA
rJMSF025J18+          GACCAGAAACCTGAAGAAACGCCTGTTCAAGTCTCCCCCATCTCTGCAAGTGATACCCCA
rJMFF015A15+                     TGAAGAAACGCCTGTTCAAGTCTCCCCCATCTNTGCAAGTGATACCCCA
                      ____________________________________________________________
consensus             GACCAGAAACCTGAAGAAACGCCTGTTCAAGTCTCCCCCATCTCTGCAAGTGATACCCCA
 
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rJMFF039J12+          ATAGCGGGTTCATCATTTACTTCGAGATTTGAATACACAGAAAATGTCCAGCCTGATGAG
rJMSF025J18+          ATAGCGGGTTCATCATTTACTTCGAGATTTGAATACACAGAAAATGTCCAGCCTGATGAG
rJMFF041P20+                                               CAGAAAATGTCCAGCCTGATGAG
rJMFF015A15+          ATAGCGGGTTCATCATTTACTTCGAGATTTGAATACACAGAAAATGTCCAGCCTGATGAG
                      ____________________________________________________________
consensus             ATAGCGGGTTCATCATTTACTTCGAGATTTGAATACACAGAAAATGTCCAGCCTGATGAG
 
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rJMFF039J12+          AAGAACTCTGATGGTACTCGTGTTTTGAACCATGTGGCCCCTCCAAAGTCAACCAATTTT
rJMSF025J18+          AAGAACTCTGATGGTACTCGTGTTTTGAACCATGTGGCCCCTCCAAAGTCAACCAATTTT
rJMFF041P20+          AAGAACTCTGATGGTACTCGTGTTTTGAACCATGTGGCCCCTCCAAAGTCAACCAATTTT
rJMFF015A15+          AAGAACTCTGATGGTACTCGTGTTTTGAACCATGTGGCCCCTCCAAAGTCAACCAATTTT
                      ____________________________________________________________
consensus             AAGAACTCTGATGGTACTCGTGTTTTGAACCATGTGGCCCCTCCAAAGTCAACCAATTTT
 
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rJMFF039J12+          TTTGCTGAATATGGGATGGACAGTGGCTTCCCAAAGAAAAGTTCAAGTTCATCCAGTGTA
rJMSF025J18+          TTTGCTGAATATGGGATGGACAGTGGCTTCCCAAAGAAAAGTTCAAGTTCATCCAGTGTA
rJMFF041P20+          TTTGCTGAATATGGGATGGACAGTGGCTTCCCAAAGAAAAGTTCAAGTTCATCCAGTGTA
rJMFF015A15+          TTTGCTGAATATGGGATGGACAGTGGCTTCCCAAAGAAAAGTTCAAGTTCATCCAGTGTA
JMSF044A19-                                           AAAGAAAAGTTCAAGTTCATCCAGTGTA
                      ____________________________________________________________
consensus             TTTGCTGAATATGGGATGGACAGTGGCTTCCCAAAGAAAAGTTCAAGTTCATCCAGTGTA
 
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rJMFF039J12+          CAAGTTGAGGAAACTGATGAAGCGAGGAAGAAGTTTTCAAATGCAAAATCCATTTCGTCA
rJMSF025J18+          CAAGTTGAGGAAACTGATGAAGCGAGGAAGAAGTTTTCAAATGCAAAATCCATTTCGTCA
rJMFF041P20+          CAAGTTGAGGAAACTGATGAAGCGAGGAAGAAGTTTTCAAATGCAAAATCCATTTCGTCA
rJMFF015A15+          CAAGTTGAGGAAACTGATGAAGCGAGGAAGAAGTTTTCAAATGCAAAATCCATTTCGTCA
JMSF044A19-           CAAGTTGAGGAAACTGATGAAGCGAGGAAGAAGTTTTCAAATGCAAAATCCATTTCGTCA
                      ____________________________________________________________
consensus             CAAGTTGAGGAAACTGATGAAGCGAGGAAGAAGTTTTCAAATGCAAAATCCATTTCGTCA
 
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rJMFF039J12+          GCCCAATTTTTTGGTGACCAAAACAAAATCGGTGATGTGGAATCTTCAGTTACCCTGCAA
rJMSF025J18+          GCCCAATTTTTTGGTGACCAAAACAAAATCGGTGATGTGGAATCTTCAGTTACCCTGCAA
rJMFF041P20+          GCCCAATTTTTTGGTGACCAAAACAAAATCGGTGATGTGGAATCTTCAGTTACCCTGCAA
rJMFF015A15+          GCCCAATTTTTTGGTGACCAAAACAAAATCGGTGATGTGGAATCTTCAGTTACCCTGCAA
JMSF044A19-           GCCCAATTTTTTGGTGACCAAAACAAAATCGGTGATGTGGAATCTTCAGTTACCCTGCAA
                      ____________________________________________________________
consensus             GCCCAATTTTTTGGTGACCAAAACAAAATCGGTGATGTGGAATCTTCAGTTACCCTGCAA
 
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rJMFF039J12+          AAGTTTTCGGGTTCAAGTGCAATCTCTAGTGCGGATCTCTTTGGTCATGACACAAGCCGA
rJMSF025J18+          AAGTTTTCGGGTTCAAGTGCAATCTCTAGTGCGGATCTCTTTGGTCATGACACAAGCCGA
rJMFF041P20+          AAGTTTTCGGGTTCAAGTGCAATCTCTAGTGCGGATCTCTTTGGTCATGACACAAGCCGA
rJMFF015A15+          AAGTTTTCGGGTTCAAGTGCAATCTCTAGTGCGGATCTCTTTGGTCATGACACAAGCCGA
JMSF044A19-           AAGTTTTCGGGTTCAAGTGCAATCTCTAGTGCGGATCTCTTTGGTCATGACACAAGCCGA
                      ____________________________________________________________
consensus             AAGTTTTCGGGTTCAAGTGCAATCTCTAGTGCGGATCTCTTTGGTCATGACACAAGCCGA
 
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rJMFF039J12+          TCATCCACAGATGTGAGTGCTAGCGACCTCATTAATCGGCTCTCTTTCCAGGCTCAACAG
rJMSF025J18+          TCATCCACAGATGTGAGTGCTAGCGACCTCATTAATCGGCTCTCTTTCCAGGCTCAACAG
rJMFF041P20+          TCATCCACAGATGTGAGTGCTAGCGACCTCATTAATCGGCTCTCTTTCCAGGCTCAACAG
rJMFF015A15+          TCATCCACAGATGTGAGTGCTAGCGACCTCATTAATCGGCTCTCTTTCCAGGCTCAACAG
JMSF044A19-           TCATCCACAGATGTGAGTGCTAGCGACCTCATTAATCGGCTCTCTTTCCAGGCTCAACAG
                      ____________________________________________________________
consensus             TCATCCACAGATGTGAGTGCTAGCGACCTCATTAATCGGCTCTCTTTCCAGGCTCAACAG
 
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rJMFF039J12+          GATATCTCCAACATCAGGAATATCGCCGGAGAAACGGGAAAGAAACTTGGCTCCTTGGCA
rJMSF025J18+          GATATCTCCAACATCAGGAATATCGCCGGAGAAACGGGAAAGAAACTTGGCTCCTTGGCA
rJMFF041P20+          GATATCTCCAACATCAGGAATATCGCCGGAGAAACGGGAAAGAAACTTGGCTCCTTGGCA
rJMFF015A15+          GATATCTCCAACATCAGGAATATCGCCGGAGAAACGGGAAAGAAACTTGGCTCCTTGGCA
JMSF044A19-           GATATCTCCAACATCAGGAATATCGGCGGAGAAACGGGAAAGAAACTTGGCTCCTTGGCA
                      ____________________________________________________________
consensus             GATATCTCCAACATCAGGAATATCGCCGGAGAAACGGGAAAGAAACTTGGCTCCTTGGCA
 
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rJMFF039J12+          TCCAGTTTGATGTCAGATCTTCAGGACAGAATCCTATGATTACAGAAGTATATTGTATAA
rJMSF025J18+          TCCAGTTTGATGTCAGATCTTCAGGACAGAATCCTATGATTACAGAAGTATATTGTATAA
rJMFF041P20+          TCCAGTTTGATGTCAGATCTTCAGGACAGAATCCTATGATTACAGAAGTATATTGTATAA
rJMFF015A15+          TCCAGTTTGATGTCAGATCTTCAGGACAGAATCCTATGATTACAGAAGTATATTGTATAA
JMSF044A19-           TCCAGTTTGATGTCAGATCTTCAGGACAGAATCCTATGATTACAGAAGTATATTGTATAA
                      ____________________________________________________________
consensus             TCCAGTTTGATGTCAGATCTTCAGGACAGAATCCTATGATTACAGAAGTATATTGTATAA
 
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rJMFF039J12+          AAATAGAGCCATAGTTTACATGCTTTATATGTAGATATAGCGAAGAGCTTTT        
rJMSF025J18+          AAATAGAGCCATAGTTTACATGCTTTATATGTAGATATAGCGAAGAGCTTTTTGAATACT
rJMFF041P20+          AAATAGAGCCATAGTTTACATGCTTTATATGTAGATATAGCGAAGAGCTTTTTGAATACT
rJMFF015A15+          AAATAGAGCCATAGTTTACATGCTTTATATGTAGATATAGCGAAGAGCTTTTTGAATACT
JMSF044A19-           AAATAGAGCCATAGTTTACATGCTTTATATGTAGATATAGCGAAGAGCTTTTTGAATACT
                      ____________________________________________________________
consensus             AAATAGAGCCATAGTTTACATGCTTTATATGTAGATATAGCGAAGAGCTTTTTGAATACT
 
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rJMSF025J18+          TTCTTCAGATGAAAAAT                                           
rJMFF041P20+          TTCTTCAGATGAAAAAT                                           
rJMFF015A15+          TTCTTCAGATGAAAAATATTTCGAAACTTGCAGGAGGAT                     
JMSF044A19-           TTCTTCAGATGAAAAATATTTCGAAACTTGCAGGAGGATTATTTTATTTTAAAAAAAAAA
                      ____________________________________________________________
consensus             TTCTTCAGATGAAAAATATTTCGAAACTTGCAGGAGGATTATTTTATTTTAAAAAAAAAA