Contig 010869:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007J09Sequence461010869 (2)ref|XP_009599778.1|164PREDICTED: uncharacterized protein LOC104095362 [Nicotiana tomentosiformis]774005603 (2)ref|XP_009774598.1|2e-85PREDICTED: dnaJ homolog subfamily C member 18-like [Nicotiana sylvestris]
JMSF043H07Sequence793010869 (2)ref|XP_009599778.1|128PREDICTED: uncharacterized protein LOC104095362 [Nicotiana tomentosiformis]776005603 (2)ref|XP_009774598.1|1e-92PREDICTED: dnaJ homolog subfamily C member 18-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF043H07+                                                          CTGGTACTTACAG
                      ____________________________________________________________
consensus                                                            CTGGTACTTACAG
 
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JMSF043H07+           TAGGAAAGTTTTGTACATTAACACAGGGTGAGCTAGTGTGCTTGTCAATGTGTGTGGAAG
                      ____________________________________________________________
consensus             TAGGAAAGTTTTGTACATTAACACAGGGTGAGCTAGTGTGCTTGTCAATGTGTGTGGAAG
 
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JMSF043H07+           GGACAGTGAGAGATAGATAGAACCTTAAAACATGTCAAGTTGAGCAGTTATCAGAATATT
                      ____________________________________________________________
consensus             GGACAGTGAGAGATAGATAGAACCTTAAAACATGTCAAGTTGAGCAGTTATCAGAATATT
 
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JMSF043H07+           ACTGTAAGCATCCACGTCTCTGAAAGTTTCTCTTTTTCTTAAACAAGTTTACTCAAAGAG
                      ____________________________________________________________
consensus             ACTGTAAGCATCCACGTCTCTGAAAGTTTCTCTTTTTCTTAAACAAGTTTACTCAAAGAG
 
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JMSF043H07+           CCACAAAACAGCTTGAATATGTGTGTGGGAGGAACAGTGAGAGATAGAACCTTATAAGTA
                      ____________________________________________________________
consensus             CCACAAAACAGCTTGAATATGTGTGTGGGAGGAACAGTGAGAGATAGAACCTTATAAGTA
 
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JMSF043H07+           GTCTATATTGAGCAGTTATCAGAATATTACTGTAAGCAGCCACATCTCTCAAAGTCTTTC
                      ____________________________________________________________
consensus             GTCTATATTGAGCAGTTATCAGAATATTACTGTAAGCAGCCACATCTCTCAAAGTCTTTC
 
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JMSF043H07+           TTTTTCTTTAATAAGTTTACTCAAAGAGCCACAAAACAGCTTGAGAGATTATTTCAAAAA
                      ____________________________________________________________
consensus             TTTTTCTTTAATAAGTTTACTCAAAGAGCCACAAAACAGCTTGAGAGATTATTTCAAAAA
 
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JMSF007J09+                          ACGTCATATGCAAGGCGGATTTTCTTGAAAGCCTGATCAGCTCCA
JMSF043H07+           CCAAATAGCTTGCTCACGTCATATGCAAGGCGGATTTTCTTGAAAGCCTGATCAGCTCCA
                      ____________________________________________________________
consensus             CCAAATAGCTTGCTCACGTCATATGCAAGGCGGATTTTCTTGAAAGCCTGATCAGCTCCA
 
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JMSF007J09+           GAGTCCTTGCTAACATCAGGATGATACTTGAGAGCGAGAAGACGATAGGCTTTCTTAATA
JMSF043H07+           GAGTCCTTGCTAACATCAGGATGATACTTGAGAGCGAGAAGACGATAGGCTTTCTTAATA
                      ____________________________________________________________
consensus             GAGTCCTTGCTAACATCAGGATGATACTTGAGAGCGAGAAGACGATAGGCTTTCTTAATA
 
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JMSF007J09+           TCGGCGGGAGAAGCAGTGGGAGAGACGCCGAGAACGGAGTAGTGGTTCTGCCGGCCGCCG
JMSF043H07+           TCGGCGGGAGAAGCAGTGGGAGAGACGCCGAGAACGGAGTAGTGGTTCTGCCGGCCGCCG
                      ____________________________________________________________
consensus             TCGGCGGGAGAAGCAGTGGGAGAGACGCCGAGAACGGAGTAGTGGTTCTGCCGGCCGCCG
 
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JMSF007J09+           ATGGCGGCGGATGCCATGACGGGCGCCCAGCGACGGCGGACGGCGCTGCAGCTATTGCTA
JMSF043H07+           ATGGCGGCGGATGCCATGACGGGCGCCCAGCGACGGCGGACGGCGCTGCAGCTATTGCTA
                      ____________________________________________________________
consensus             ATGGCGGCGGATGCCATGACGGGCGCCCAGCGACGGCGGACGGCGCTGCAGCTATTGCTA
 
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JMSF007J09+           ATTGGCCAGGTCCATGGAGCGATGAGTAAGTTCCGATTGGTTCCCCCAGCTCCGTCTATG
JMSF043H07+           ATTGGCCAGGTCCATGGAGCGATGAGTAAGTTCCGATTGGTTCCCCCAGCTCCGTCTATG
                      ____________________________________________________________
consensus             ATTGGCCAGGTCCATGGAGCGATGAGTAAGTTCCGATTGGTTCCCCCAGCTCCGTCTATG
 
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JMSF007J09+           GAGGTCGGGCGCCATAAGAGATACGCCTGCATGCTCGGCGTCAGCTGGTTCACAACTCCA
JMSF043H07+           GAGGTCGGGCGCCATAAGAGATACGCCTGCATGCTCGGCGTCAGCTGGTTCACAACTCCA
                      ____________________________________________________________
consensus             GAGGTCGGGCGCCATAAGAGATACGCCTGCATGCTCGGCGTCAGCTGGTTCACAACTCCA
 
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JMSF007J09+           TGGTC                                                       
JMSF043H07+           TGGTCGATAATCTGAGTTCTCATTCTGGAGCTCTTGAAACTGGGAAATGGAGGAATGCTA
                      ____________________________________________________________
consensus             TGGTCGATAATCTGAGTTCTCATTCTGGAGCTCTTGAAACTGGGAAATGGAGGAATGCTA