Contig 010867:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010E01Sequence228010867 (4)ref|XP_006424729.1|2e-06hypothetical protein CICLE_v10028165mg [Citrus clementina] ref|XP_006424730.1| h750010867 (4)ref|XP_009776901.1|4e-45PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr
JMSF043F23Sequence648010867 (4)ref|XP_009599077.1|4e-50PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tomentos667010867 (4)ref|XP_009776901.1|4e-44PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043F23- ATATATGCATGAGAGAACTTTAGAAAAGTAGGTTAATTGAGACTACTCC
                      ____________________________________________________________
consensus ATATATGCATGAGAGAACTTTAGAAAAGTAGGTTAATTGAGACTACTCC
 
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rJMSF043F23- TTTAATTCAAACAAGAAAAGCGTGTTCTATATTCCCTTTCATGTATCTTATACCTATATA
                      ____________________________________________________________
consensus TTTAATTCAAACAAGAAAAGCGTGTTCTATATTCCCTTTCATGTATCTTATACCTATATA
 
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rJMSF043F23- TAAAGGCTAAATATTCTGCAATTACTTCTATGGGGCCTGTGCCCTTCTTGACAAAATGTT
rJMFF010E01- AAATGTT
                      ____________________________________________________________
consensus TAAAGGCTAAATATTCTGCAATTACTTCTATGGGGCCTGTGCCCTTCTTGACAAAATGTT
 
. : . : . : . : . : . :
rJMSF043F23- GTAATCTAGTCAAGTTTGTCAGGTTAATTGGTTGCCCAATAACCACAAGGTTCTAAGTTT
rJMFF010E01- GTAATCTAGTCAAGTTTGTCAGGTTAATTGGTTGCCCAATAACCACAAGGTTCTAAGTTT
                      ____________________________________________________________
consensus GTAATCTAGTCAAGTTTGTCAGGTTAATTGGTTGCCCAATAACCACAAGGTTCTAAGTTT
 
. : . : . : . : . : . :
rJMSF043F23- GACTCCCCGCTAATATCACAAGACGAGATTCGTCTTTTCCCAACTGATCAAAACTCAAAT
rJMFF010E01- GACTCCCCGCTAATATCACAAGACGAGATTCGTCTTTTCCCAACTGATCAAAACTCAAAT
                      ____________________________________________________________
consensus GACTCCCCGCTAATATCACAAGACGAGATTCGTCTTTTCCCAACTGATCAAAACTCAAAT
 
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rJMSF043F23- GGCATAGAGTTTCTTGAACTCATCATCAGGAACCTCTGGATCTGACATAACAGACACAGA
rJMFF010E01- GGCATAGAGTTTCTTGAACTCATCATCAGGAACCTCTGGATCTGACATAACAGACACAGA
                      ____________________________________________________________
consensus GGCATAGAGTTTCTTGAACTCATCATCAGGAACCTCTGGATCTGACATAACAGACACAGA
 
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rJMSF043F23- CCATGATTGAGACATGCTACTCCTGGCTGACTTGCTGAGATTCCTCAAGTTCGAAGCCTC
rJMFF010E01- CCATGATTGAGACATGCTACTCCTGGCTGACTTGCTGAGATTCCTCAAGTTCGAAGCCTC
                      ____________________________________________________________
consensus CCATGATTGAGACATGCTACTCCTGGCTGACTTGCTGAGATTCCTCAAGTTCGAAGCCTC
 
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rJMSF043F23- GATTCGGTGCATAATCACCCAATAGCAGAGTGTTCCCAGCGTTGCAACCATGATAAAAGT
rJMFF010E01- GATTCGGTGCATAATCACCCAATAGCAGAGTGTTCCCAGCGTTGCAACCATGATAAAAGT
                      ____________________________________________________________
consensus GATTCGGTGCATAATCACCCAATAGCAGAGTGTTCCCAGCGTTGCAACCATGATAAAAGT
 
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rJMSF043F23- TCCCGTTACGGTTACCCCAATCGCCAGCCACTTCTGCTCTTCTCCTACAACGATATAGGA
rJMFF010E01- TCCCGTTACGGTTACCCCAATCGCCAGCCACTTCTGCTCTTCTCCTACAACGATATAGGA
                      ____________________________________________________________
consensus TCCCGTTACGGTTACCCCAATCGCCAGCCACTTCTGCTCTTCTCCTACAACGATATAGGA
 
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rJMSF043F23- CAGTGCTAGAAAAGCCACCGACACGAATGCACAGGCGAGCCACATTAGCTTGTTGATAAC
rJMFF010E01- CAGTGCTAGAAAAGCCACCGACACGAATGCACAGGCGAGCCACATTAGCTTGTTGATAAC
                      ____________________________________________________________
consensus CAGTGCTAGAAAAGCCACCGACACGAATGCACAGGCGAGCCACATTAGCTTGTTGATAAC
 
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rJMSF043F23- TGCCATCATTTGCTTCTTTGCTTTTCTTTCAACCACGACTACTGATGTCTGGACCACCAC
rJMFF010E01- TGCCATCATTTGCTTCTTTGCTTTTCTTTCAACCACGACTACTGATGTCTGGACCACCAC
                      ____________________________________________________________
consensus TGCCATCATTTGCTTCTTTGCTTTTCTTTCAACCACGACTACTGATGTCTGGACCACCAC
 
. : . : . : . : . : . :
rJMSF043F23- GACTGCCAGCGATATGAA
rJMFF010E01- GACTGCCAGCGATATGAAGAGTGCCCGTTTCTTGCAGAAGCGTGCAGCGCTGTCTTCCCA
                      ____________________________________________________________
consensus GACTGCCAGCGATATGAAGAGTGCCCGTTTCTTGCAGAAGCGTGCAGCGCTGTCTTCCCA
 
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rJMFF010E01- TTGTTTCTCGGTATGGCGGCTAAGCTGTTGTTCGTCTCCAGTAGAAAATCGACAGCCTCG
JMSF043F23+ CAGTAGAAAATNGACAGCCTNG
                      ____________________________________________________________
consensus TTGTTTCTCGGTATGGCGGCTAAGCTGTTGTTCGTCTCCAGTAGAAAATCGACAGCCTCG
 
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rJMFF010E01- ATGTGGCCTTGTGCAGCTGCAGTGAGCAAGGCTGTGGTGTTTGATTGATCAAATGTCACT
JMSF043F23+ ATGTGGCNTNGNGCAGNNGCAGTGAGCAAGGNTGNGGTGTNTGANTGATCAAANGTCANN
                      ____________________________________________________________
consensus ATGTGGCCTTGTGCAGCTGCAGTGAGCAAGGCTGTGGTGTTTGATTGATCAAATGTCACT
 
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rJMFF010E01- GACAGTTGAGGAAATGCCTCCAAAAGGACCCTCATCATTTCAACATCTCCTTGCTTGGCA
JMSF043F23+ GACAGTNGAGGAAATGCNTCCAAAAGGACCNTCATCATTTCAACATNTCCTTGNTTGGCA
                      ____________________________________________________________
consensus GACAGTTGAGGAAATGCCTCCAAAAGGACCCTCATCATTTCAACATCTCCTTGCTTGGCA
 
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rJMFF010E01- GCAACATGAAAG
JMSF043F23+ GCAACATGAAAGGCATCAAACCCATTTNTGGCTNTGAGACNTGCAGATNGAAGAACATAG
                      ____________________________________________________________
consensus GCAACATGAAAGGCATCAAACCCATTTNTGGCTNTGAGACNTGCAGATNGAAGAACATAG
 
. : . : . : . : . : . :
JMSF043F23+ TGTTTGATCATCTCCTTCACCAAATCCACATACCCATACTNTGCAGCAATATAAAGGGCT
                      ____________________________________________________________
consensus TGTTTGATCATCTCCTTCACCAAATCCACATACCCATACTNTGCAGCAATATAAAGGGCT
 
. : . : . : . : . : . :
JMFF010E01+ CCCTCCCTCTTCACAC
JMSF043F23+ GTTTCTCCAGACTGGTTTTGCCTGGACAAAACCTCATCTCTCTCCCCTCCCTCTTCACAC
                      ____________________________________________________________
consensus GTTTCTCCAGACTGGTTTTGCCTGGACAAAACCTCATCTCTCTCCCCTCCCTCTTCACAC
 
. : . : . : . : . : . :
JMFF010E01+ CCACTGATCATCCCCAAAACCTCTCCAAGATTCCCAGCTCTGGCTGCTGAGTGGAGTTGG
JMSF043F23+ CCACTGATCATCCCCAAAACCTCTCCAAGATTCCCAGCTCTGGCTGCTGAGTGGAGTTGG
                      ____________________________________________________________
consensus CCACTGATCATCCCCAAAACCTCTCCAAGATTCCCAGCTCTGGCTGCTGAGTGGAGTTGG
 
. : . : . : . : . : . :
JMFF010E01+ GTGTCCCCTCTTTTACCAGTCAGCTGTTTCACCATCTTCTTCTTCGTTGTATTATTATTA
JMSF043F23+ GTGTCCCCTCTTTTACCAGTCAGCTGTTTCACCATCTTCTTCTTCGTTGTATTATTATTA
                      ____________________________________________________________
consensus GTGTCCCCTCTTTTACCAGTCAGCTGTTTCACCATCTTCTTCTTCGTTGTATTATTATTA
 
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JMFF010E01+ TTATTCCCTCTTCTCCCTGAATCTTCCATTGCTTTCTCTGCTGCTCCACCTCCCCTTTTT
JMSF043F23+ TTATTCCCTCTTCTCCCTGAATCTTCCATTGCTTTCTCTGCTGCTCCACCTCCCCTTTTT
                      ____________________________________________________________
consensus TTATTCCCTCTTCTCCCTGAATCTTCCATTGCTTTCTCTGCTGCTCCACCTCCCCTTTTT
 
. : . : . : . : . : . :
JMFF010E01+ TCTATATGTCAAACTGCATTAACCTCTCAACC
JMSF043F23+ TCTATATGTCAAACTGCATTAACCTCTCAACCGGGCAACCAGCAGCTCAATCTTTACACC
                      ____________________________________________________________
consensus TCTATATGTCAAACTGCATTAACCTCTCAACCGGGCAACCAGCAGCTCAATCTTTACACC