Contig 010867:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010E01Sequence228010867 (4)ref|XP_006424729.1|2e-06hypothetical protein CICLE_v10028165mg [Citrus clementina] ref|XP_006424730.1| h750010867 (4)ref|XP_009776901.1|4e-45PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr
JMSF043F23Sequence648010867 (4)ref|XP_009599077.1|4e-50PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tomentos667010867 (4)ref|XP_009776901.1|4e-44PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestr

Alignment

This contig is upended


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rJMSF043F23-                     ATATATGCATGAGAGAACTTTAGAAAAGTAGGTTAATTGAGACTACTCC
                      ____________________________________________________________
consensus                        ATATATGCATGAGAGAACTTTAGAAAAGTAGGTTAATTGAGACTACTCC
 
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rJMSF043F23-          TTTAATTCAAACAAGAAAAGCGTGTTCTATATTCCCTTTCATGTATCTTATACCTATATA
                      ____________________________________________________________
consensus             TTTAATTCAAACAAGAAAAGCGTGTTCTATATTCCCTTTCATGTATCTTATACCTATATA
 
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rJMSF043F23-          TAAAGGCTAAATATTCTGCAATTACTTCTATGGGGCCTGTGCCCTTCTTGACAAAATGTT
rJMFF010E01-                                                               AAATGTT
                      ____________________________________________________________
consensus             TAAAGGCTAAATATTCTGCAATTACTTCTATGGGGCCTGTGCCCTTCTTGACAAAATGTT
 
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rJMSF043F23-          GTAATCTAGTCAAGTTTGTCAGGTTAATTGGTTGCCCAATAACCACAAGGTTCTAAGTTT
rJMFF010E01-          GTAATCTAGTCAAGTTTGTCAGGTTAATTGGTTGCCCAATAACCACAAGGTTCTAAGTTT
                      ____________________________________________________________
consensus             GTAATCTAGTCAAGTTTGTCAGGTTAATTGGTTGCCCAATAACCACAAGGTTCTAAGTTT
 
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rJMSF043F23-          GACTCCCCGCTAATATCACAAGACGAGATTCGTCTTTTCCCAACTGATCAAAACTCAAAT
rJMFF010E01-          GACTCCCCGCTAATATCACAAGACGAGATTCGTCTTTTCCCAACTGATCAAAACTCAAAT
                      ____________________________________________________________
consensus             GACTCCCCGCTAATATCACAAGACGAGATTCGTCTTTTCCCAACTGATCAAAACTCAAAT
 
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rJMSF043F23-          GGCATAGAGTTTCTTGAACTCATCATCAGGAACCTCTGGATCTGACATAACAGACACAGA
rJMFF010E01-          GGCATAGAGTTTCTTGAACTCATCATCAGGAACCTCTGGATCTGACATAACAGACACAGA
                      ____________________________________________________________
consensus             GGCATAGAGTTTCTTGAACTCATCATCAGGAACCTCTGGATCTGACATAACAGACACAGA
 
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rJMSF043F23-          CCATGATTGAGACATGCTACTCCTGGCTGACTTGCTGAGATTCCTCAAGTTCGAAGCCTC
rJMFF010E01-          CCATGATTGAGACATGCTACTCCTGGCTGACTTGCTGAGATTCCTCAAGTTCGAAGCCTC
                      ____________________________________________________________
consensus             CCATGATTGAGACATGCTACTCCTGGCTGACTTGCTGAGATTCCTCAAGTTCGAAGCCTC
 
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rJMSF043F23-          GATTCGGTGCATAATCACCCAATAGCAGAGTGTTCCCAGCGTTGCAACCATGATAAAAGT
rJMFF010E01-          GATTCGGTGCATAATCACCCAATAGCAGAGTGTTCCCAGCGTTGCAACCATGATAAAAGT
                      ____________________________________________________________
consensus             GATTCGGTGCATAATCACCCAATAGCAGAGTGTTCCCAGCGTTGCAACCATGATAAAAGT
 
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rJMSF043F23-          TCCCGTTACGGTTACCCCAATCGCCAGCCACTTCTGCTCTTCTCCTACAACGATATAGGA
rJMFF010E01-          TCCCGTTACGGTTACCCCAATCGCCAGCCACTTCTGCTCTTCTCCTACAACGATATAGGA
                      ____________________________________________________________
consensus             TCCCGTTACGGTTACCCCAATCGCCAGCCACTTCTGCTCTTCTCCTACAACGATATAGGA
 
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rJMSF043F23-          CAGTGCTAGAAAAGCCACCGACACGAATGCACAGGCGAGCCACATTAGCTTGTTGATAAC
rJMFF010E01-          CAGTGCTAGAAAAGCCACCGACACGAATGCACAGGCGAGCCACATTAGCTTGTTGATAAC
                      ____________________________________________________________
consensus             CAGTGCTAGAAAAGCCACCGACACGAATGCACAGGCGAGCCACATTAGCTTGTTGATAAC
 
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rJMSF043F23-          TGCCATCATTTGCTTCTTTGCTTTTCTTTCAACCACGACTACTGATGTCTGGACCACCAC
rJMFF010E01-          TGCCATCATTTGCTTCTTTGCTTTTCTTTCAACCACGACTACTGATGTCTGGACCACCAC
                      ____________________________________________________________
consensus             TGCCATCATTTGCTTCTTTGCTTTTCTTTCAACCACGACTACTGATGTCTGGACCACCAC
 
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rJMSF043F23-          GACTGCCAGCGATATGAA                                          
rJMFF010E01-          GACTGCCAGCGATATGAAGAGTGCCCGTTTCTTGCAGAAGCGTGCAGCGCTGTCTTCCCA
                      ____________________________________________________________
consensus             GACTGCCAGCGATATGAAGAGTGCCCGTTTCTTGCAGAAGCGTGCAGCGCTGTCTTCCCA
 
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rJMFF010E01-          TTGTTTCTCGGTATGGCGGCTAAGCTGTTGTTCGTCTCCAGTAGAAAATCGACAGCCTCG
JMSF043F23+                                                 CAGTAGAAAATNGACAGCCTNG
                      ____________________________________________________________
consensus             TTGTTTCTCGGTATGGCGGCTAAGCTGTTGTTCGTCTCCAGTAGAAAATCGACAGCCTCG
 
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rJMFF010E01-          ATGTGGCCTTGTGCAGCTGCAGTGAGCAAGGCTGTGGTGTTTGATTGATCAAATGTCACT
JMSF043F23+           ATGTGGCNTNGNGCAGNNGCAGTGAGCAAGGNTGNGGTGTNTGANTGATCAAANGTCANN
                      ____________________________________________________________
consensus             ATGTGGCCTTGTGCAGCTGCAGTGAGCAAGGCTGTGGTGTTTGATTGATCAAATGTCACT
 
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rJMFF010E01-          GACAGTTGAGGAAATGCCTCCAAAAGGACCCTCATCATTTCAACATCTCCTTGCTTGGCA
JMSF043F23+           GACAGTNGAGGAAATGCNTCCAAAAGGACCNTCATCATTTCAACATNTCCTTGNTTGGCA
                      ____________________________________________________________
consensus             GACAGTTGAGGAAATGCCTCCAAAAGGACCCTCATCATTTCAACATCTCCTTGCTTGGCA
 
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rJMFF010E01-          GCAACATGAAAG                                                
JMSF043F23+           GCAACATGAAAGGCATCAAACCCATTTNTGGCTNTGAGACNTGCAGATNGAAGAACATAG
                      ____________________________________________________________
consensus             GCAACATGAAAGGCATCAAACCCATTTNTGGCTNTGAGACNTGCAGATNGAAGAACATAG
 
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JMSF043F23+           TGTTTGATCATCTCCTTCACCAAATCCACATACCCATACTNTGCAGCAATATAAAGGGCT
                      ____________________________________________________________
consensus             TGTTTGATCATCTCCTTCACCAAATCCACATACCCATACTNTGCAGCAATATAAAGGGCT
 
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JMFF010E01+                                                       CCCTCCCTCTTCACAC
JMSF043F23+           GTTTCTCCAGACTGGTTTTGCCTGGACAAAACCTCATCTCTCTCCCCTCCCTCTTCACAC
                      ____________________________________________________________
consensus             GTTTCTCCAGACTGGTTTTGCCTGGACAAAACCTCATCTCTCTCCCCTCCCTCTTCACAC
 
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JMFF010E01+           CCACTGATCATCCCCAAAACCTCTCCAAGATTCCCAGCTCTGGCTGCTGAGTGGAGTTGG
JMSF043F23+           CCACTGATCATCCCCAAAACCTCTCCAAGATTCCCAGCTCTGGCTGCTGAGTGGAGTTGG
                      ____________________________________________________________
consensus             CCACTGATCATCCCCAAAACCTCTCCAAGATTCCCAGCTCTGGCTGCTGAGTGGAGTTGG
 
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JMFF010E01+           GTGTCCCCTCTTTTACCAGTCAGCTGTTTCACCATCTTCTTCTTCGTTGTATTATTATTA
JMSF043F23+           GTGTCCCCTCTTTTACCAGTCAGCTGTTTCACCATCTTCTTCTTCGTTGTATTATTATTA
                      ____________________________________________________________
consensus             GTGTCCCCTCTTTTACCAGTCAGCTGTTTCACCATCTTCTTCTTCGTTGTATTATTATTA
 
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JMFF010E01+           TTATTCCCTCTTCTCCCTGAATCTTCCATTGCTTTCTCTGCTGCTCCACCTCCCCTTTTT
JMSF043F23+           TTATTCCCTCTTCTCCCTGAATCTTCCATTGCTTTCTCTGCTGCTCCACCTCCCCTTTTT
                      ____________________________________________________________
consensus             TTATTCCCTCTTCTCCCTGAATCTTCCATTGCTTTCTCTGCTGCTCCACCTCCCCTTTTT
 
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JMFF010E01+           TCTATATGTCAAACTGCATTAACCTCTCAACC                            
JMSF043F23+           TCTATATGTCAAACTGCATTAACCTCTCAACCGGGCAACCAGCAGCTCAATCTTTACACC
                      ____________________________________________________________
consensus             TCTATATGTCAAACTGCATTAACCTCTCAACCGGGCAACCAGCAGCTCAATCTTTACACC