Contig 010866:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+                                      GACAAGTCATGTTAGCCACCAGCATGAACGAG
JMSF043E21-                                       GACAAGTCATGTTAGCCACCAGCATGAACGAG
                      ____________________________________________________________
consensus                                         GACAAGTCATGTTAGCCACCAGCATGAACGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          CTTGGGAGAAACTCGATATAGAGTTCATGCAGAGAGAAAATATCAAAAAAGAAGTTTCAC
JMSF043E21-           CTTGGGAGAAACTCGATATAGAGTTCATGCAGAGAGAAAATATCAAAAAAGAAGTTTCAC
                      ____________________________________________________________
consensus             CTTGGGAGAAACTCGATATAGAGTTCATGCAGAGAGAAAATATCAAAAAAGAAGTTTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          TTGAAGATCAGCTTNTTCTTGCAAAAAAGAAAAGATCAGAAAGCTTGAATGAGAATGTTN
JMSF043E21-           TTGAAGATCAGCTTCTTCTTGCAAAAAAGAAAAGATCAGAAAGCTTGAATGAGAATGTTC
                      ____________________________________________________________
consensus             TTGAAGATCAGCTTCTTCTTGCAAAAAAGAAAAGATCAGAAAGCTTGAATGAGAATGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          TGACGGTTTTACCCTCTCGTTNTGCGGAAAGATCACCGAGTGTCAATTCAGTTCCAGAAC
JMSF043E21-           TGACGGTTTTACCCTCTCGTTCTGCGGAAAGATCACCGAGTGTCAATTCAGTTCCAGAAC
                      ____________________________________________________________
consensus             TGACGGTTTTACCCTCTCGTTCTGCGGAAAGATCACCGAGTGTCAATTCAGTTCCAGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          GGTTTGTTCGAATTGGAATGCAGATTTAATAGAGGACAAGGTAATCATCAGTTACCCNTT
JMSF043E21-           GGTTTGTTCGAATTGGAATGCAGATTTAATAGAGGACAAGGTAATCATCAGTTACCCATT
                      ____________________________________________________________
consensus             GGTTTGTTCGAATTGGAATGCAGATTTAATAGAGGACAAGGTAATCATCAGTTACCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          NTTCTTGTTGCAGGCCTGACTGTTCAGTTGAGAGAAGTCCAAACAATTTCATAACAATCT
JMSF043E21-           CTTCTTGTTGCAGGCCTGACTGTTCAGTTGAGAGAAGTCCAAACAATTTCATAACAATCT
                      ____________________________________________________________
consensus             CTTCTTGTTGCAGGCCTGACTGTTCAGTTGAGAGAAGTCCAAACAATTTCATAACAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          CCTTTATGTGCCTAGCTTCCATTTTTAAGAAGCCAACNTTCNGGCATTGCGGTTACAAAC
JMSF043E21-           CCTTTATGTGCCTAGCTTCCATTTTTAAGAAGCCAACATTCAGGCATTGCGGTTACAAAC
                      ____________________________________________________________
consensus             CCTTTATGTGCCTAGCTTCCATTTTTAAGAAGCCAACATTCAGGCATTGCGGTTACAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          TAACAAACCATGTTATCAAATCTTCACAATCATGTAGCTCAAGTTCCTGTTAAGAAAACT
JMSF043E21-           TAAC-AACCATGTTATCAAATCTTCACAATCATGTAGCTCAAGTTCCTGTTAAG-AAACT
                      ____________________________________________________________
consensus             TAACAAACCATGTTATCAAATCTTCACAATCATGTAGCTCAAGTTCCTGTTAAGAAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043E21+          GTGTTTGCTCTCTTTTTTT                                         
JMSF043E21-           GTGTTTGCTCTCTTTTTTTTTTGGTTTCTAATAAATTTCTTTTTCTTCTTAAAAAAAAAA
                      ____________________________________________________________
consensus             GTGTTTGCTCTCTTTTTTTTTTGGTTTCTAATAAATTTCTTTTTCTTCTTAAAAAAAAAA