| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028A14 | Sequence | 527 | 010858 (9) | ref|XP_006359369.1| | 2e-77 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | 683 | 001371 (7) | ref|XP_009768280.1| | 8e-71 | PREDICTED: dynamin-related protein 3A-like [Nicotiana sylvestris] |
| JMFS010E05 | Sequence | 628 | 010858 (9) | ref|XP_006359369.1| | 2e-87 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | |||||
| JMFS049A07 | Sequence | 612 | 010858 (9) | ref|XP_006359369.1| | 6e-90 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | |||||
| JMFS058G07 | Sequence | 610 | 010858 (9) | ref|XP_006359369.1| | 8e-91 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | |||||
| JMSF020O07 | Sequence | 628 | 010858 (9) | ref|XP_006359369.1| | 2e-64 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | |||||
| JMSF025E06 | Sequence | 689 | 010858 (9) | ref|XP_006359369.1| | 8e-110 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | 787 | 001371 (7) | ref|XP_009768280.1| | 2e-54 | PREDICTED: dynamin-related protein 3A-like [Nicotiana sylvestris] |
| JMSF027B17 | Sequence | 679 | 010858 (9) | ref|XP_006359369.1| | 8e-110 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | 772 | 001371 (7) | ref|XP_009768280.1| | 2e-70 | PREDICTED: dynamin-related protein 3A-like [Nicotiana sylvestris] |
| JMSF029G13 | Sequence | 664 | 010858 (9) | ref|XP_006359369.1| | 3e-91 | PREDICTED: dynamin-related protein 3A-like [Solanum tuberosum] | 756 | 001371 (7) | ref|XP_009768280.1| | 7e-86 | PREDICTED: dynamin-related protein 3A-like [Nicotiana sylvestris] |
| JMSF042A21 | Sequence | 486 | 010858 (9) | emb|CAN69848.1| | 2e-33 | hypothetical protein VITISV_007522 [Vitis vinifera] | 763 | 001371 (7) | ref|XP_009768280.1| | 1e-82 | PREDICTED: dynamin-related protein 3A-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF027B17+ AGTCAGCATTGGCCGGTGTAACAGCAAGTATTAGACAACTTG
JMSF025E06+ GTCAGCATTGGCCGGTGTAACAGCAAGTATTAGACAACTTG
____________________________________________________________
consensus AGTCAGCATTGGCCGGTGTAACAGCAAGTATTAGACAACTTG
. : . : . : . : . : . :
JMSF027B17+ GGAGTTTAATATATGACATTATCATTGTCCTAATACGGGCTTCAATATCAGAAGGCTGAT
JMSF025E06+ GGAGTTTAATATATGACATTATCATTGTCCTAATACGGGCTTCAATATCAGAAGGCTGAT
JMFS058G07+ TACGGGCTTCAATATCAGAAGGCTGAT
JMFS010E05+ ATCAGAAGGCTGAT
JMFS049A07+ TACGGGCTTCAATATCAGAAGGCTGAT
JMSF029G13+ TACGGGCTTCAATATCAGAAGGCTGAT
____________________________________________________________
consensus GGAGTTTAATATATGACATTATCATTGTCCTAATACGGGCTTCAATATCAGAAGGCTGAT
. : . : . : . : . : . :
JMSF027B17+ CACCAACAGGGACCTTTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
JMSF025E06+ CACCAACAGGGACCTTTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
JMFS058G07+ CACCAACAGGGACCTTTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
JMFS010E05+ CACCAACAGGGACCTTTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
JMFS049A07+ CACCAACAGGGACCTNTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
JMFF028A14+ CCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
JMSF029G13+ CACCAACAGGGACCTTTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
____________________________________________________________
consensus CACCAACAGGGACCTTTGTTATGCCAGGCAAATCAACTAGAGTAATATCTAGAACATTTG
. : . : . : . : . : . :
JMSF027B17+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMSF025E06+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMFS058G07+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMFS010E05+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMFS049A07+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMFF028A14+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMSF029G13+ GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
JMSF020O07+ ATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
____________________________________________________________
consensus GAGAGAATATTTTCAACCGAATCTGTTTGTCCGAAACACCTTTGTTCCCTCCAGCTTCTC
. : . : . : . : . : . :
JMSF027B17+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMSF025E06+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMFS058G07+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMFS010E05+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMFS049A07+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMFF028A14+ TGTCTGTCTCAGCNTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMSF029G13+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
JMSF020O07+ TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
____________________________________________________________
consensus TGTCTGTCTCAGCCTGAATTTCTTTCCGAATATCATTGAAATCGAAAAACTTCTTTCCAG
. : . : . : . : . : . :
JMSF027B17+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMSF025E06+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMFS058G07+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMFS010E05+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMFS049A07+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMFF028A14+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMSF029G13+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMSF020O07+ GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
JMSF042A21+ GTCTGGA
____________________________________________________________
consensus GAAGGTGGAGGAACTCTCCCCACTCCTCATCGGTGCTGTCGGGCTTCCGCTTGGTCTGGA
. : . : . : . : . : . :
JMSF027B17+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMSF025E06+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMFS058G07+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMFS010E05+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMFS049A07+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMFF028A14+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMSF029G13+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMSF020O07+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
JMSF042A21+ GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
____________________________________________________________
consensus GCAACTGAAGCACGAGGGGACGGCGAGTACAGATGTCGGAGCCTCGGGGCAAGAAGTCGC
. : . : . : . : . : . :
JMSF027B17+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMSF025E06+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMFS058G07+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMFS010E05+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMFS049A07+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMFF028A14+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMSF029G13+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMSF020O07+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
JMSF042A21+ GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
____________________________________________________________
consensus GACCGACGAGGGCTTCGAGGACGCTGGACTTACCACTGCTTTGGCTTCCAACGACAGCCA
. : . : . : . : . : . :
JMSF027B17+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMSF025E06+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMFS058G07+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMFS010E05+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMFS049A07+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMFF028A14+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMSF029G13+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMSF020O07+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
JMSF042A21+ CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
____________________________________________________________
consensus CCTGAGGGAGCTCGATCGTGGACTGGCTACCGAGCTGCGCGAAGATGTCTTGCAGCTTGT
. : . : . : . : . : . :
JMSF027B17+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMSF025E06+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMFS058G07+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMFS010E05+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMFS049A07+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMFF028A14+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGAAGTCGATGTAG
JMSF029G13+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMSF020O07+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
JMSF042A21+ TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
____________________________________________________________
consensus TCACAATAGGAATGACCGAGTGCCCCAGCGGCGCCGCATTCAAATTGGACGTCGATGTAG
. : . : . : . : . : . :
JMSF027B17+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMSF025E06+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMFS058G07+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMFS010E05+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMFS049A07+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMFF028A14+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMSF029G13+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMSF020O07+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
JMSF042A21+ AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
____________________________________________________________
consensus AAGAAGGGACGGCTTCTTCCGCCATGGAGATTTGTGTAAGCTTCGATTGAGATCGCTGTG
. : . : . : . : . : . :
JMSF027B17+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGAT
JMSF025E06+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAACCCT
JMFS058G07+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAA
JMFS010E05+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAACCCCTAGTGAAGTTTTG
JMFS049A07+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAA-CC
JMFF028A14+ AGAATACAAC
JMSF029G13+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAA-CCCTAGTGAAGTTTTG
JMSF020O07+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAA-CCCTAGTGAAGTTTTG
JMSF042A21+ AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAA-CCCTAGTGAAGTTTTG
____________________________________________________________
consensus AGAATACAACGCAGGAATTCCGGAGAGATCGTTGATATGAAAA-CCCTAGTGAAGTTTTG
. : . : . : . : . : . :
JMFS010E05+ AAATTTGTAATGTT
JMSF029G13+ AAATTTGTAATGTTTTTGGGAGAGGGGGACAGC
JMSF020O07+ AAATTTGTAATGTTTTTGGGAGAGGGGGACAGCGTGTGCCAGAGTAGAAGGGGAGGGCGC
JMSF042A21+ AAATTTGTAATGTTTTTGGGAGAGGGGGACAGCGTGTGCCAGAGTAGAAGGGGAGGGCGC
____________________________________________________________
consensus AAATTTGTAATGTTTTTGGGAGAGGGGGACAGCGTGTGCCAGAGTAGAAGGGGAGGGCGC
. : . : . : . : . : . :
JMSF020O07+ GTTTGTGTGTTCTGTCCTACCGCCCAAGCAAAAGAAAAAGAAAACAAC
JMSF042A21+ GTTTGTGTGTTCTGTCCTACCGCCCAAGCAAAAGAAAAAGAAAACAACTGAAAATAGTTC
____________________________________________________________
consensus GTTTGTGTGTTCTGTCCTACCGCCCAAGCAAAAGAAAAAGAAAACAACTGAAAATAGTTC