Contig 010856:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010D24Sequence520010856 (6)800019072ref|XP_006347667.1|2e-09PREDICTED: sphingoid long-chain bases kinase 1-like [Solanum tuberosum]
JMFS090D06Sequence627010856 (6)ref|XP_009593622.1|3e-16PREDICTED: sphingoid long-chain bases kinase 1 [Nicotiana tomentosiformis]
JMFS103C10Sequence571010856 (6)ref|XP_010646428.1|4e-11PREDICTED: sphingoid long-chain bases kinase 1 [Vitis vinifera] ref|XP_010646429
JMSF005C03Sequence290010856 (6)
JMSF041M06Sequence701010856 (6)ref|XP_009593622.1|1e-16PREDICTED: sphingoid long-chain bases kinase 1 [Nicotiana tomentosiformis]
JMSF045C02Sequence460010856 (6)862008640 (3)ref|XP_011091854.1|1e-82PREDICTED: sphingoid long-chain bases kinase 1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFS090D06+                                  AGGATCGCCGGAATTGCTGACGCCGCCATCCGAGCGG
                      ____________________________________________________________
consensus                                    AGGATCGCCGGAATTGCTGACGCCGCCATCCGAGCGG
 
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JMFS090D06+           GCGGAGCTCCTCCCCTTGCTCTTTTTTTCCGGGAAGACAACCGGCGACGAATGCTGCCCC
JMFS103C10+                                      TCCGGGAAGACAACCGGCGACGAATGCTGCCCC
JMSF041M06+                                      TCCGGGAAGACAACCGGCGACGAATGCTGCCCC
                      ____________________________________________________________
consensus             GCGGAGCTCCTCCCCTTGCTCTTTTTTTCCGGGAAGACAACCGGCGACGAATGCTGCCCC
 
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JMFS090D06+           GTCGATATCTGAGAGCAAATGCCAAGACGACGAAGCGACTGCGGCGACGCCGCCAGCTTC
JMFS103C10+           GTCGATATCTGAGAGCAAATGCCAAGACGACGAAGCGACTGCGGCGACGCCGCCAGCTTC
JMSF041M06+           GTCGATATCTGAGAGCAAATGCCAAGACGACGAAGCGACTGCGGCGACGCCGCCAGCTTC
                      ____________________________________________________________
consensus             GTCGATATCTGAGAGCAAATGCCAAGACGACGAAGCGACTGCGGCGACGCCGCCAGCTTC
 
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JMFS090D06+           AAGGAATTGTTCTTGGAGAGATTCCCACTCTTCTGCATATCAAATCCCAGCAGATTCCAG
JMFS103C10+           AAGGAATTGTTCTTGGAGAGATTCCCACTCTTCTGCATATCAAATCCCAGCAGATTCCAG
JMSF045C02+                                         TTCTGCATATCAAATCCCAGCAGATTCCAG
JMFF010D24+                      CTTGGAGAGATTCCCACTCTTCTGCATATCAAATCCCAGCAGATTCCAG
JMSF041M06+           AAGGAATTGTTCTTGGAGAGATTCCCACTCTTCTGCATATCAAATCCCAGCAGATTCCAG
                      ____________________________________________________________
consensus             AAGGAATTGTTCTTGGAGAGATTCCCACTCTTCTGCATATCAAATCCCAGCAGATTCCAG
 
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JMFS090D06+           AGTGAAAATCTCACCAGAACCAAGCAACCAACCGGTAACACTCTCCGTCCGTTCAGAAAT
JMFS103C10+           AGTGAAAATCTCACCAGAACCAAGCAACCAACCGGTAACACTCTCCGTCCGTTCAGAAAT
JMSF045C02+           AGTGAAAATCTCACCAGAACCAAGCAACCAACCGGTAGCACTCTCCGTCCGTTCAGAAAT
JMFF010D24+           AGTGAAAATCTCACCAGAACCAAGCAACCAACCGGTAACACTCTCCGTCCGTTCAGAAAT
JMSF041M06+           AGTGAAAATCTCACCAGAACCAAGCAACCAACCGGTAACACTCTCCGTCCGTTCAGAAAT
                      ____________________________________________________________
consensus             AGTGAAAATCTCACCAGAACCAAGCAACCAACCGGTAACACTCTCCGTCCGTTCAGAAAT
 
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JMFS090D06+           GATCCAAGATCCCACGCCCCAATTATCACTCCGGATCACAACCGCCCCTCAAACTCTCCA
JMFS103C10+           GATCCAAGATCCCACGCCCCAATTATCACTCCGGATCACAACCGCCCCTCAAACTCTCCA
JMSF045C02+           GATCCAAGATCCCACGCCCCAATTATCACTCCGGATCACAACCGCCCCTCAAACTCTCCA
JMFF010D24+           GATCCAAGATCCCACGCCCCAATTATCACTCCGGATCACAACCGCCCCTCAAACTCTCCA
JMSF041M06+           GATCCAAGATCCCACGCCCCAATTATCACTCCGGATCACAACCGCCCCTCAAACTCTCCA
                      ____________________________________________________________
consensus             GATCCAAGATCCCACGCCCCAATTATCACTCCGGATCACAACCGCCCCTCAAACTCTCCA
 
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JMFS090D06+           TAGAAGCTTAATCTCTCGGATCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
JMFS103C10+           TAGAAGCTTAATCTCTCGGATCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
JMSF045C02+           TAGAAGCTTAATCTCTCGGATCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
JMSF005C03+                               TCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
JMFF010D24+           TAGAAGCTTAATCTCTCGGATCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
JMSF041M06+           TAGAAGCTTAATCTCTCGGATCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
                      ____________________________________________________________
consensus             TAGAAGCTTAATCTCTCGGATCTTGCAGCCAAGCTCTGAAGCTAGAACGCAGAAAAAACG
 
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JMFS090D06+           AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
JMFS103C10+           AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
JMSF045C02+           AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
JMSF005C03+           AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
JMFF010D24+           AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
JMSF041M06+           AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
                      ____________________________________________________________
consensus             AAGACTGCCGATTAGGGTTTTACTATTTCTCAGAAAAATCAGTGACGTGGCTGTGTGTGC
 
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JMFS090D06+           GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
JMFS103C10+           GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
JMSF045C02+           GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
JMSF005C03+           GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
JMFF010D24+           GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
JMSF041M06+           GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
                      ____________________________________________________________
consensus             GCCGGCGGTGATCGGCGAGGCTGAACGGACTACTCCGGCGAGAATTTCAGGCGGAGAAAA
 
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JMFS090D06+           CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
JMFS103C10+           CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
JMSF045C02+           CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
JMSF005C03+           CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
JMFF010D24+           CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
JMSF041M06+           CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
                      ____________________________________________________________
consensus             CGGGTTAAGGAGCAGTTGAAGATGGAATTGAGGAAGCAAAGAAAATGAAAAAGGTGACAG
 
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JMFS090D06+           CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGG          
JMFS103C10+           CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGGCAGCA     
JMSF045C02+           CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGGCAGCACCATT
JMSF005C03+           CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGGCAGCACCATT
JMFF010D24+           CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGGCAGCACCATT
JMSF041M06+           CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGGCAGCACCATT
                      ____________________________________________________________
consensus             CTTTAAGGTTAAGTGTGTGTTGGTAAGGAGGGAGGGAGAAAAGAAAGTGGCAGCACCATT
 
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JMSF045C02+           GCTTCTTT                                                    
JMSF005C03+           GCTTCTTT                                                    
JMFF010D24+           GCTTCTTTCAGCTTTCTGCCTTCTACCAAACACAAGAAAATAATAGTCAAC         
JMSF041M06+           GCTTCTTTCAGCTTTCTGCCTTCTACCAAACACAAGAAAATAATAGTCAACATACACCCC
                      ____________________________________________________________
consensus             GCTTCTTTCAGCTTTCTGCCTTCTACCAAACACAAGAAAATAATAGTCAACATACACCCC