Contig 010851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS096H10Sequence618010851 (2)ref|XP_011078049.1|1e-80PREDICTED: threonine synthase 1, chloroplastic [Sesamum indicum] ref|XP_01107805
JMSF041E02Sequence750010851 (2)ref|XP_009804563.1|4e-92PREDICTED: threonine synthase, chloroplastic-like [Nicotiana sylvestris]729015131ref|XP_007012727.1|8e-110Pyridoxal-5'-phosphate-dependent enzyme family protein [Theobroma cacao] gb|EOY

Alignment

This contig is upended


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JMSF041E02+                                         CGGCGCAGTAAGCCGATAGAGCCGNTGAGG
                      ____________________________________________________________
consensus                                           CGGCGCAGTAAGCCGATAGAGCCGNTGAGG
 
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JMSF041E02+           TGTCGCCGGTTGACGCGCAGCCGACTCCGACTAAACCGCCCGGTTTCTTCTTCATTATCC
                      ____________________________________________________________
consensus             TGTCGCCGGTTGACGCGCAGCCGACTCCGACTAAACCGCCCGGTTTCTTCTTCATTATCC
 
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JMFS096H10+                   TGGCTCACCAGAACCGTCATCCCCAAATCCTTGAAACTCCCCGTGTGGCTAA
JMSF041E02+           GGTTCACCTGGCTCACCAGAACCGTCATCCCCAAATCCTTGAAACTCCCCGTGTGGCTAA
                      ____________________________________________________________
consensus             GGTTCACCTGGCTCACCAGAACCGTCATCCCCAAATCCTTGAAACTCCCCGTGTGGCTAA
 
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JMFS096H10+           TCCCGCAATGCTTCACCCATAAATCGTTCATGCTGACGTATTTCTTCCCGAATCTTTCGG
JMSF041E02+           TCCCGCAATGCTTCACCCATAAATCGTTCATGCTGACGTATTTCTTCCCGAATCTTTCGG
                      ____________________________________________________________
consensus             TCCCGCAATGCTTCACCCATAAATCGTTCATGCTGACGTATTTCTTCCCGAATCTTTCGG
 
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JMFS096H10+           CCCAGAAAAGATTCGAGTTCCCTTCAAACGCGCTAACAATATCTTCGTCCGCGATTTCCG
JMSF041E02+           CCCAGAAAAGATTCGAGTTCCCTTCAAACGCGCTAACAATATCTTCGTCCGCGATTTCCG
                      ____________________________________________________________
consensus             CCCAGAAAAGATTCGAGTTCCCTTCAAACGCGCTAACAATATCTTCGTCCGCGATTTCCG
 
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JMFS096H10+           GCAAAACCCACTCCTTTTTGGACCACACACCCGACCCGTACGGCCAGGCGGTTTTCCCGA
JMSF041E02+           GCAAAACCCACTCCTTTTTGGACCACACACCCGACCCGTACGGCCAGGCGGTTTTCCCGA
                      ____________________________________________________________
consensus             GCAAAACCCACTCCTTTTTGGACCACACACCCGACCCGTACGGCCAGGCGGTTTTCCCGA
 
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JMFS096H10+           CCCGCGAATCGAACAGATTCTTCCAGTACTCCCCGTCGAACTGCTTCAACGCCTCCAGGT
JMSF041E02+           CCCGCGAATCGAACAGATTCTTCCAGTACTCCCCGTCGAACTGCTTCAACGCCTCCAGGT
                      ____________________________________________________________
consensus             CCCGCGAATCGAACAGATTCTTCCAGTACTCCCCGTCGAACTGCTTCAACGCCTCCAGGT
 
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JMFS096H10+           CATGCTGCACATCCAGCAGCCCGCCGGAGCTGCAGCGGTAGACGACGTCGTCGAGGGAGT
JMSF041E02+           CATGCTGCACATCCAGCAGCCCGCCGGAGCTGCAGCGGTAGACGACGTCGTCGAGGGAGT
                      ____________________________________________________________
consensus             CATGCTGCACATCCAGCAGCCCGCCGGAGCTGCAGCGGTAGACGACGTCGTCGAGGGAGT
 
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JMFS096H10+           AAGACTCGGCGGCGGGGACGCCGGTGGAGATGGAGGTGAAGGGCGCGTACTTGGCGGAGA
JMSF041E02+           AAGACTCGGCGGCGGGGACGCCGGTGGAGATGGAGGTGAAGGGCGCGTACTTGGAGGAGA
                      ____________________________________________________________
consensus             AAGACTCGGCGGCGGGGACGCCGGTGGAGATGGAGGTGAAGGGCGCGTACTTGGCGGAGA
 
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JMFS096H10+           AGTTGAGAGTGGTCGGCGGCAGAGAAGAGTGGTGGTTGTTGCCGCTGACTGTTGTTGGTG
JMSF041E02+           AGTTGAGAGTGGTCGGCGGCAGAGAAGAGTGGTGGTTGTTGCCGCTGACTGTTGTTGGTG
                      ____________________________________________________________
consensus             AGTTGAGAGTGGTCGGCGGCAGAGAAGAGTGGTGGTTGTTGCCGCTGACTGTTGTTGGTG
 
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JMFS096H10+           AGGCGGTGGCGCATCGGATGTTCCGGTGGTGGCGGCGGAGGAGGGCGGAGGATTGGTAAC
JMSF041E02+           AGGCGGTGGCGCATCGGATGTTCCGGTGGTGGCGGCGGAGGAGGGCGGAGGATTGGTAAC
                      ____________________________________________________________
consensus             AGGCGGTGGCGCATCGGATGTTCCGGTGGTGGCGGCGGAGGAGGGCGGAGGATTGGTAAC
 
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JMFS096H10+           TGTAACATGACGCCATGGCTGCTGCTTATATAGAAGAATTTGACGATCGGAAAAGATGAG
JMSF041E02+           TGTAACATGACGCCATGGCTGCTGCTTATATAGAAGAATTTGACGATCGGAAAAGATGAG
                      ____________________________________________________________
consensus             TGTAACATGACGCCATGGCTGCTGCTTATATAGAAGAATTTGACGATCGGAAAAGATGAG
 
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JMFS096H10+           AAACGGAGATTGTTTATTGGTTTCTC                                  
JMSF041E02+           AAACGGAGATTGTTTATTGGTTTCTCCGGCGACTCTGTAACTGAAAGAATATAAATGCCC
                      ____________________________________________________________
consensus             AAACGGAGATTGTTTATTGGTTTCTCCGGCGACTCTGTAACTGAAAGAATATAAATGCCC