Contig 010851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS096H10Sequence618010851 (2)ref|XP_011078049.1|1e-80PREDICTED: threonine synthase 1, chloroplastic [Sesamum indicum] ref|XP_01107805
JMSF041E02Sequence750010851 (2)ref|XP_009804563.1|4e-92PREDICTED: threonine synthase, chloroplastic-like [Nicotiana sylvestris]729015131ref|XP_007012727.1|8e-110Pyridoxal-5'-phosphate-dependent enzyme family protein [Theobroma cacao] gb|EOY

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041E02+ CGGCGCAGTAAGCCGATAGAGCCGNTGAGG
                      ____________________________________________________________
consensus CGGCGCAGTAAGCCGATAGAGCCGNTGAGG
 
. : . : . : . : . : . :
JMSF041E02+ TGTCGCCGGTTGACGCGCAGCCGACTCCGACTAAACCGCCCGGTTTCTTCTTCATTATCC
                      ____________________________________________________________
consensus TGTCGCCGGTTGACGCGCAGCCGACTCCGACTAAACCGCCCGGTTTCTTCTTCATTATCC
 
. : . : . : . : . : . :
JMFS096H10+ TGGCTCACCAGAACCGTCATCCCCAAATCCTTGAAACTCCCCGTGTGGCTAA
JMSF041E02+ GGTTCACCTGGCTCACCAGAACCGTCATCCCCAAATCCTTGAAACTCCCCGTGTGGCTAA
                      ____________________________________________________________
consensus GGTTCACCTGGCTCACCAGAACCGTCATCCCCAAATCCTTGAAACTCCCCGTGTGGCTAA
 
. : . : . : . : . : . :
JMFS096H10+ TCCCGCAATGCTTCACCCATAAATCGTTCATGCTGACGTATTTCTTCCCGAATCTTTCGG
JMSF041E02+ TCCCGCAATGCTTCACCCATAAATCGTTCATGCTGACGTATTTCTTCCCGAATCTTTCGG
                      ____________________________________________________________
consensus TCCCGCAATGCTTCACCCATAAATCGTTCATGCTGACGTATTTCTTCCCGAATCTTTCGG
 
. : . : . : . : . : . :
JMFS096H10+ CCCAGAAAAGATTCGAGTTCCCTTCAAACGCGCTAACAATATCTTCGTCCGCGATTTCCG
JMSF041E02+ CCCAGAAAAGATTCGAGTTCCCTTCAAACGCGCTAACAATATCTTCGTCCGCGATTTCCG
                      ____________________________________________________________
consensus CCCAGAAAAGATTCGAGTTCCCTTCAAACGCGCTAACAATATCTTCGTCCGCGATTTCCG
 
. : . : . : . : . : . :
JMFS096H10+ GCAAAACCCACTCCTTTTTGGACCACACACCCGACCCGTACGGCCAGGCGGTTTTCCCGA
JMSF041E02+ GCAAAACCCACTCCTTTTTGGACCACACACCCGACCCGTACGGCCAGGCGGTTTTCCCGA
                      ____________________________________________________________
consensus GCAAAACCCACTCCTTTTTGGACCACACACCCGACCCGTACGGCCAGGCGGTTTTCCCGA
 
. : . : . : . : . : . :
JMFS096H10+ CCCGCGAATCGAACAGATTCTTCCAGTACTCCCCGTCGAACTGCTTCAACGCCTCCAGGT
JMSF041E02+ CCCGCGAATCGAACAGATTCTTCCAGTACTCCCCGTCGAACTGCTTCAACGCCTCCAGGT
                      ____________________________________________________________
consensus CCCGCGAATCGAACAGATTCTTCCAGTACTCCCCGTCGAACTGCTTCAACGCCTCCAGGT
 
. : . : . : . : . : . :
JMFS096H10+ CATGCTGCACATCCAGCAGCCCGCCGGAGCTGCAGCGGTAGACGACGTCGTCGAGGGAGT
JMSF041E02+ CATGCTGCACATCCAGCAGCCCGCCGGAGCTGCAGCGGTAGACGACGTCGTCGAGGGAGT
                      ____________________________________________________________
consensus CATGCTGCACATCCAGCAGCCCGCCGGAGCTGCAGCGGTAGACGACGTCGTCGAGGGAGT
 
. : . : . : . : . : . :
JMFS096H10+ AAGACTCGGCGGCGGGGACGCCGGTGGAGATGGAGGTGAAGGGCGCGTACTTGGCGGAGA
JMSF041E02+ AAGACTCGGCGGCGGGGACGCCGGTGGAGATGGAGGTGAAGGGCGCGTACTTGGAGGAGA
                      ____________________________________________________________
consensus AAGACTCGGCGGCGGGGACGCCGGTGGAGATGGAGGTGAAGGGCGCGTACTTGGCGGAGA
 
. : . : . : . : . : . :
JMFS096H10+ AGTTGAGAGTGGTCGGCGGCAGAGAAGAGTGGTGGTTGTTGCCGCTGACTGTTGTTGGTG
JMSF041E02+ AGTTGAGAGTGGTCGGCGGCAGAGAAGAGTGGTGGTTGTTGCCGCTGACTGTTGTTGGTG
                      ____________________________________________________________
consensus AGTTGAGAGTGGTCGGCGGCAGAGAAGAGTGGTGGTTGTTGCCGCTGACTGTTGTTGGTG
 
. : . : . : . : . : . :
JMFS096H10+ AGGCGGTGGCGCATCGGATGTTCCGGTGGTGGCGGCGGAGGAGGGCGGAGGATTGGTAAC
JMSF041E02+ AGGCGGTGGCGCATCGGATGTTCCGGTGGTGGCGGCGGAGGAGGGCGGAGGATTGGTAAC
                      ____________________________________________________________
consensus AGGCGGTGGCGCATCGGATGTTCCGGTGGTGGCGGCGGAGGAGGGCGGAGGATTGGTAAC
 
. : . : . : . : . : . :
JMFS096H10+ TGTAACATGACGCCATGGCTGCTGCTTATATAGAAGAATTTGACGATCGGAAAAGATGAG
JMSF041E02+ TGTAACATGACGCCATGGCTGCTGCTTATATAGAAGAATTTGACGATCGGAAAAGATGAG
                      ____________________________________________________________
consensus TGTAACATGACGCCATGGCTGCTGCTTATATAGAAGAATTTGACGATCGGAAAAGATGAG
 
. : . : . : . : . : . :
JMFS096H10+ AAACGGAGATTGTTTATTGGTTTCTC
JMSF041E02+ AAACGGAGATTGTTTATTGGTTTCTCCGGCGACTCTGTAACTGAAAGAATATAAATGCCC
                      ____________________________________________________________
consensus AAACGGAGATTGTTTATTGGTTTCTCCGGCGACTCTGTAACTGAAAGAATATAAATGCCC