Contig 010848:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012A10Sequence231010848 (2)ref|XP_009596277.1|2e-19PREDICTED: ABC transporter B family member 25-like [Nicotiana tomentosiformis]142007200 (2)
JMSF040P09Sequence649010848 (2)ref|XP_009596277.1|4e-78PREDICTED: ABC transporter B family member 25-like [Nicotiana tomentosiformis]611007200 (2)emb|CDP18058.1|9e-40unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P09+                      TTCAGAGAGCCTACTAAGGAGTTCCCCAGTTCGAGTTACGTCAAAGAAG
                      ____________________________________________________________
consensus                        TTCAGAGAGCCTACTAAGGAGTTCCCCAGTTCGAGTTACGTCAAAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P09+           GCTATCTCTTGGTGAACAAGGTGGCTGAACAAGTTCTTTCTCAAGTGAGCCACAACCCTT
                      ____________________________________________________________
consensus             GCTATCTCTTGGTGAACAAGGTGGCTGAACAAGTTCTTTCTCAAGTGAGCCACAACCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P09+           TCACTTGCAGAAGAGAACAACCATGCACGAAGTGCTGTGCAGATAGAACCAATTACGACA
                      ____________________________________________________________
consensus             TCACTTGCAGAAGAGAACAACCATGCACGAAGTGCTGTGCAGATAGAACCAATTACGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P09+           ACCAAAAATATTTCAAGAATGGTGTTTTTTACAGCTCCTAAAGCTTCGGATTTCTGTTCA
                      ____________________________________________________________
consensus             ACCAAAAATATTTCAAGAATGGTGTTTTTTACAGCTCCTAAAGCTTCGGATTTCTGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P09+           TCTGTTTGGATATCCCTTGAAACGATATCAATAATCGTTCCCCCGAATTTTGGAACCAAA
                      ____________________________________________________________
consensus             TCTGTTTGGATATCCCTTGAAACGATATCAATAATCGTTCCCCCGAATTTTGGAACCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012A10+                                                             CCCTGCTTCA
JMSF040P09+           ATGCTAGACGTTGATGCAATCAAGAGTGCTAGTGTTGCAAGAACCAACTTCCCTGCTTCA
                      ____________________________________________________________
consensus             ATGCTAGACGTTGATGCAATCAAGAGTGCTAGTGTTGCAAGAACCAACTTCCCTGCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012A10+           GGTTTAGCCAGTGAAAGCACTCGGCCAAATCCCACATTTGGTGCCGGCGCTCCATCTCCA
JMSF040P09+           GGTTTAGCCAGTGAAAGCACTCGGCCAAATCCCACATTTGGTGCCGGCGCTCCATCTCCA
                      ____________________________________________________________
consensus             GGTTTAGCCAGTGAAAGCACTCGGCCAAATCCCACATTTGGTGCCGGCGCTCCATCTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012A10+           TGCTCAAGGTCAGTGAGCTGACCATTCTCCAGTGAATCATGTCTCTTTCCCCCTGCTTGT
JMSF040P09+           TGCTCAAGGTCAGTGAGCTGACCATTCTCCAGTGAATCATGTCTCTTTCCCCCTGCTTGT
                      ____________________________________________________________
consensus             TGCTCAAGGTCAGTGAGCTGACCATTCTCCAGTGAATCATGTCTCTTTCCCCCTGCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012A10+           TTGTTCAGGAGAGGAGCTCTCTCACTGCCAAAGCCATGCCCATGCATTCTGTCCATGAAT
JMSF040P09+           TTGTTCAGGAGAGGAGCTCTCTCACTGCCAAAGCCATGCCCATGCATTCTGTCCATGAAT
                      ____________________________________________________________
consensus             TTGTTCAGGAGAGGAGCTCTCTCACTGCCAAAGCCATGCCCATGCATTCTGTCCATGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012A10+           GAATTGCACCTTCAAGAAGAAGACTTTTGAAGTCTGAG                      
JMSF040P09+           GAATTGCACCTTCAAGAAGAAGACTTTTGAAGTCTGAGTCTCTGAGAGTGAAGGTGGGAG
                      ____________________________________________________________
consensus             GAATTGCACCTTCAAGAAGAAGACTTTTGAAGTCTGAGTCTCTGAGAGTGAAGGTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P09+           GGGAATACTTATATGTTAGTCTGCAATAGTTCCATAAGGGTTGGAAATTGGAAGAAAACC
                      ____________________________________________________________
consensus             GGGAATACTTATATGTTAGTCTGCAATAGTTCCATAAGGGTTGGAAATTGGAAGAAAACC