Contig 010846:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-                     AAATTGAGAAACCTAAATTATGGTACAGCAGTCCCTAGAGAACACAAGC
                      ____________________________________________________________
consensus                        AAATTGAGAAACCTAAATTATGGTACAGCAGTCCCTAGAGAACACAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          AAAATTTCATTCCAAAGAAACCCTTAATTTACTAAACCCAAAATCTGTGGGCTAAGTCAG
                      ____________________________________________________________
consensus             AAAATTTCATTCCAAAGAAACCCTTAATTTACTAAACCCAAAATCTGTGGGCTAAGTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          AAACAATTTTCTAGCAATGTCATCCTATGCATTCAGAAAAAAGGTTCGGTAAACAAGAGC
                      ____________________________________________________________
consensus             AAACAATTTTCTAGCAATGTCATCCTATGCATTCAGAAAAAAGGTTCGGTAAACAAGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          TATAACACCACTTGGTCACTAAACTTTATGGAACAATGCTTTCAAATATGACGTAGAGAG
                      ____________________________________________________________
consensus             TATAACACCACTTGGTCACTAAACTTTATGGAACAATGCTTTCAAATATGACGTAGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          GCAAAAGGTTTCAGAGCAGTGGAGGGTAGATGATCAAATGAGCTAGTTCGGAAGTAAATG
                      ____________________________________________________________
consensus             GCAAAAGGTTTCAGAGCAGTGGAGGGTAGATGATCAAATGAGCTAGTTCGGAAGTAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          TGCGGCTGATATGTGCCCACTAGATGGAAATGCTTCGGCAGGAGGGAGGAGCAAATGAGC
                      ____________________________________________________________
consensus             TGCGGCTGATATGTGCCCACTAGATGGAAATGCTTCGGCAGGAGGGAGGAGCAAATGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          TCAAGAATAAAAGGCTAGTGCCTAATGGTGTTGCACAAACAAGTTCTGAGTTGATTACTT
JMSF040L18+                                              CAAACAAGTTCTGAGTTGATTACTT
                      ____________________________________________________________
consensus             TCAAGAATAAAAGGCTAGTGCCTAATGGTGTTGCACAAACAAGTTCTGAGTTGATTACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          TTCCAGTTCTCCAATGCAGAAATCATCAATCATCTCAAATACTCGGGTAGCGTGTTGAGG
JMSF040L18+           TTCCAGTTCTCCAATGCAGAAATCATCAATCATCTCAAATACTCGGGTAGCGTGTTGAGG
                      ____________________________________________________________
consensus             TTCCAGTTCTCCAATGCAGAAATCATCAATCATCTCAAATACTCGGGTAGCGTGTTGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          CCCGTAGAAACCTTCAGTAGAATCATCACCAGCATGCGCCAGGATGGCATCACCACCAGG
JMSF040L18+           CCCGTAGAAACCTTCAGTAGAATCATCACCAGCATGCGCCAGGATGGCATCACCACCAGG
                      ____________________________________________________________
consensus             CCCGTAGAAACCTTCAGTAGAATCATCACCAGCATGCGCCAGGATGGCATCACCACCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          GTGCTCTTCTACGTATGAGGTAACATCAAAAACCTTGTCTTTAATAATGATCCAACAGTC
JMSF040L18+           GTGCTCTTCTACGTATGAGGTAACATCAAAAACCTTGTCTTTAATAATGATCCAACAGTC
                      ____________________________________________________________
consensus             GTGCTCTTCTACGTATGAGGTAACATCAAAAACCTTGTCTTTAATAATGATCCAACAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          GGTTCTCTTGTTATGCAATGCAACTTCTGCTTTACTGTAAGCTTTTGGTGCAAACTTGGT
JMSF040L18+           GGTTCTCTTGTTATGCAATGCAACTTCTGCTTTACTGTAAGCTTTTGGTGCAAACTTGGT
                      ____________________________________________________________
consensus             GGTTCTCTTGTTATGCAATGCAACTTCTGCTTTACTGTAAGCTTTTGGTGCAAACTTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          TTGAGCATTCGCTTGGAGCTTTCGGGGTTGATCAGATTTATTGCGCATCATAGGGATAAC
JMSF040L18+           TTGAGCATTCGCTTGGAGCTTTCGGGGTTGATCAGATTTATTGCGCATCATAGGGATAAC
                      ____________________________________________________________
consensus             TTGAGCATTCGCTTGGAGCTTTCGGGGTTGATCAGATTTATTGCGCATCATAGGGATAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          AATGAGCAGCCCAAGCAAGATTCCAAGTACCAACGTCGCAAACGCTACCTCCATAGCTTT
JMSF040L18+           AATGAGCAGCCCAAGCAAGATTCCAAGTACCAACGTCGCAAACGCTACCTCCATAGCTTT
                      ____________________________________________________________
consensus             AATGAGCAGCCCAAGCAAGATTCCAAGTACCAACGTCGCAAACGCTACCTCCATAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          AAGCTCCAAAGAGAATGGTGGTCTCAAGTATCGAGATAATCGCCCGAGGATCCAGAGAAA
JMSF040L18+           AAGCTCCAAAGAGAATGGTGGTCTCAAGTATCGAGATAATCGCCCGAGGATCCAGAGAAA
                      ____________________________________________________________
consensus             AAGCTCCAAAGAGAATGGTGGTCTCAAGTATCGAGATAATCGCCCGAGGATCCAGAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040L18-          TCAGACTAGAAGGACTCAAATTTCACGTCTGGGTCAGATTTTGAGCCNAAAA        
JMSF040L18+           TCAGACTAGAAGGACTCAAATTTCACGTCTGGGTCAGATTTTGAGCCAAAAATTCACACT
                      ____________________________________________________________
consensus             TCAGACTAGAAGGACTCAAATTTCACGTCTGGGTCAGATTTTGAGCCAAAAATTCACACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L18+           TTTTACCTAAAAAAACAAATAAATATGCGAACCCACGGAGTTGAATTGGGTCACGGGAGG
                      ____________________________________________________________
consensus             TTTTACCTAAAAAAACAAATAAATATGCGAACCCACGGAGTTGAATTGGGTCACGGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L18+           AATCTTTTACTCACTGCGGGAGTGGGAGTGTGGCTTTGAGGGACTGCCGAATGCCGAACC
                      ____________________________________________________________
consensus             AATCTTTTACTCACTGCGGGAGTGGGAGTGTGGCTTTGAGGGACTGCCGAATGCCGAACC