Contig 010845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036N01Sequence559010845 (4)ref|XP_009586697.1|4e-50PREDICTED: blue copper protein-like [Nicotiana tomentosiformis]622010845 (4)ref|XP_004237949.1|4e-19PREDICTED: blue copper protein [Solanum lycopersicum]
JMSF040I12Sequence672010845 (4)ref|XP_009586697.1|7e-50PREDICTED: blue copper protein-like [Nicotiana tomentosiformis]785010845 (4)ref|XP_009586697.1|2e-49PREDICTED: blue copper protein-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-                 CTAATGTAATATTTAAAGAAAAATCCTGAAATGGTCTCAATATATAAAAGTAA
                      ____________________________________________________________
consensus                    CTAATGTAATATTTAAAGAAAAATCCTGAAATGGTCTCAATATATAAAAGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          ATACATGCAATCATACATAATAATCATTACAAGCAGAAAATGAAATCTGTAGGATAAGGA
rJMSF040I12-                   ATCATACATAATAATCATTACAAACAGAAAATGAAATCTGTAGGATAAGGA
                      ____________________________________________________________
consensus             ATACATGCAATCATACATAATAATCATTACAAGCAGAAAATGAAATCTGTAGGATAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          AAAGATGGCCGACCCCACCCCCACCCCCACCCGGTGGGGGTGGGGGGCGGGCGAGTGTTC
rJMSF040I12-          AAAGATGGCCGACCCCACCCCCACCCCCACCCGGTGGGGGTGGGGGGCGGGCGAGTGTTC
                      ____________________________________________________________
consensus             AAAGATGGCCGACCCCACCCCCACCCCCACCCGGTGGGGGTGGGGGGCGGGCGAGTGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          GGCAGAGAAGGGTAGTTTGGACATAGTACAGCACTGCCTCTGTCCTGACTATAGGACCAT
rJMSF040I12-          GGCAGAGAAGGGTAGTTTGGACATAGTACAGCACTGCCTCTGTCCTGACTATAGGACCAT
JMSF040I12+                                                           CTATAGGACCAT
                      ____________________________________________________________
consensus             GGCAGAGAAGGGTAGTTTGGACATAGTACAGCACTGCCTCTGTCCTGACTATAGGACCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          CTCATGAACCATTACAACAACCCAACCCATCAACATTGCTAGCAATGGAGATAGAGTTCC
rJMSF040I12-          CTCATGAACCATTACAACAACCCAACCCATCAACATTGCTAGCAATGGAGATAGAGTTCC
JMSF040I12+           CTCATGAACCATTACAACAACCCAACCCATCAACATTGCTAGCAATGGAGATAGAGTTCC
                      ____________________________________________________________
consensus             CTCATGAACCATTACAACAACCCAACCCATCAACATTGCTAGCAATGGAGATAGAGTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          GGCTGAATCCGGAATCGGAACCGCGCCTCTAGGTAGTGTATTATCGGTAGCAGTGGGGAT
rJMSF040I12-          GGCTGAATCCGGAATCGGAACCGCGCCTCTAGGTAGTGTATTATCGGTAGCAGTGGGGAT
JMFF036N01+                                                   TTATCGGTAGCAGTGGGGAT
JMSF040I12+           GGCTGAATCCGGAATCGGAACCGCGCCTCTAGGTAGTGTATTATCGGTAGCAGTGGGGAT
                      ____________________________________________________________
consensus             GGCTGAATCCGGAATCGGAACCGCGCCTCTAGGTAGTGTATTATCGGTAGCAGTGGGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          TCCTGGGGCGGCGGTGGTGGTGGTGGGAATGCCGGCTGCGCCGCTGGTGGTCGTTGGCGG
rJMSF040I12-          TCCTGGGGCGGCGGTGGTGGTGGTGGGAATGCCGGCTGCGCCGCTGGTGGTCGTTGGCGG
JMFF036N01+           TCCTGGGGCGGCGGTGGTGGTGGTGGGAATGCCGGCTGCGCCGCTGGTGGTCGTTGGCGG
JMSF040I12+           TCCTGGGGCGGCGGTGGTGGTGGTGGGAATGCCGGCTGCGCCGCTGGTGGTCGTTGGCGG
                      ____________________________________________________________
consensus             TCCTGGGGCGGCGGTGGTGGTGGTGGGAATGCCGGCTGCGCCGCTGGTGGTCGTTGGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          ACTAGTAGTGGTTCCTGGGCTGGTGGGTGTAGTGGCATCAGCTCCGCCGTCCACGGTGAC
rJMSF040I12-          ACTAGTAGTGGTTCCTGGGCTGGTGGGTGTAGTGGCATCAGCTCCGCCGTCCACGGTGAC
JMFF036N01+           ACTAGTAGTGGTTCCTGGGCTGGTGGGTGTAGTGGCATCAGCTCCGCCGTCCACGGTGAC
JMSF040I12+           ACTAGTAGTGGTTCCTGGGCTGGTGGGTGTAGTGGCATCAGCTCCGCCGTCCACGGTGAC
                      ____________________________________________________________
consensus             ACTAGTAGTGGTTCCTGGGCTGGTGGGTGTAGTGGCATCAGCTCCGCCGTCCACGGTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          CACCAGCTTCATGCCGCCGCTGCAGTGGCCCATCACACTACAAATGAAGTAGTGCTTGCC
rJMSF040I12-          CACCAGCTTCATGCCGCCGCTGCAGTGGCCCATCACACTACAAATGAAGTAGTGCTTGCC
JMFF036N01+           CACCAGCTTCATGCCGCCGCTGCAGTGGCCCATCACACTACAAATGAAGTAGTGCTTGCC
JMSF040I12+           CACCAGCTTCATGCCGCCGCTGCAGTGGCCCATCACACTACAAATGAAGTAGTGCTTGCC
                      ____________________________________________________________
consensus             CACCAGCTTCATGCCGCCGCTGCAGTGGCCCATCACACTACAAATGAAGTAGTGCTTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          CGCCGTCTTCAGTGGAATAGTGGTGGCGCCGCTGCTGTCAGTGCTTATGGAATTCCCCAC
rJMSF040I12-          CGCCGTCTTCAGTGGAATAGTGGTGGCGCCGCTGCTGTCAGTGCTTATGGAATTCCCCAC
JMFF036N01+           CGCCGTCTTCAGTGGAATAGTGGTGGCGCCGCTGCTGTCAGTGCTTATGGAATTCCCCAC
JMSF040I12+           CGCCGTCTTCAGTGGAATAGTGGTGGCGCCGCTGCTGTCAGTGCTTATGGAATTCCCCAC
                      ____________________________________________________________
consensus             CGCCGTCTTCAGTGGAATAGTGGTGGCGCCGCTGCTGTCAGTGCTTATGGAATTCCCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036N01-          CGTGCATGACTGGTAGTCACTTGGACTCA                               
rJMSF040I12-          CGTGCATGACTGGTAGTCACTTGGACTCACTTCATCCACTGTGTGACCACCTGGATAGTT
JMFF036N01+           CGTGCATGACTGGTAGTCACTTGGACTCACTTCATCCACTGTGTGACCACCTGGATAGTT
JMSF040I12+           CGTGCATGACTGGTAGTCACTTGGACTCACTTCATCCACTGTGTGACCACCTGGATAGTT
                      ____________________________________________________________
consensus             CGTGCATGACTGGTAGTCACTTGGACTCACTTCATCCACTGTGTGACCACCTGGATAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I12-          GAAAACAAGAGAATCACCAACTTTGAAAGTTTTGGCGCTAGACCAGGTACCGTAATCAAC
JMFF036N01+           GAAAACAAGAGAATCACCAACTTTGAAAGTTTTGGCGCTAGACCAGGTACCGTAATCAAC
JMSF040I12+           GAAAACAAGAGAATCACCAACTTTGAAAGTTTTGGCGCTAGACCAGGTACCGTAATCAAC
                      ____________________________________________________________
consensus             GAAAACAAGAGAATCACCAACTTTGAAAGTTTTGGCGCTAGACCAGGTACCGTAATCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I12-          GCTGAGAGCCCACCCGGCAGTGTCTCCGACAGTGTACACCGTGCTCAAACATGGTACGGC
JMFF036N01+           GCTGAGAGCCCACCCGGCAGTGTCTCCGACAGTGTACACCGTGCTCAAACATGGTACGGC
JMSF040I12+           GCTGAGAGCCCACCCGGCAGTGTCTCCGACAGTGTACACCGTGCTCAAACATGGTACGGC
                      ____________________________________________________________
consensus             GCTGAGAGCCCACCCGGCAGTGTCTCCGACAGTGTACACCGTGCTCAAACATGGTACGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I12-          AGACAACATCATACCAAGAATCAAGCATGCAATTCCAACATTAAACTCCATTTTACTCTT
JMFF036N01+           AGACAACATCATACCAAGAATCAAGCATGCAATTCCAACATTAAACTCCATTTTACTCTT
JMSF040I12+           AGACAACATCATACCAAGAATCAAGCATGCAATTCCAACATTAAACTCCATTTTACTCTT
                      ____________________________________________________________
consensus             AGACAACATCATACCAAGAATCAAGCATGCAATTCCAACATTAAACTCCATTTTACTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF040I12-          TTTTTTGGATGA                                                
JMFF036N01+           TTTTTTGGATGAGAGAGTGGGAGAGAGAGAGAAAGATGGTTTAATTTGTGGGGAATGTT 
JMSF040I12+           TTTTTTGGATGAGAGAGTGGGAGAGAGAGAGAAAGATGGTTTAATTTGTGGGGAATGTTC
                      ____________________________________________________________
consensus             TTTTTTGGATGAGAGAGTGGGAGAGAGAGAGAAAGATGGTTTAATTTGTGGGGAATGTTC