Contig 010843:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034B21Sequence437010843 (3)ref|XP_009791815.1|3e-22PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana sylvestris]713005780 (2)ref|XP_008218485.1|2e-50PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase ARI8 [Prun
JMFS056D09Sequence565010843 (3)emb|CDP04163.1|4e-48unnamed protein product [Coffea canephora]
JMSF040D07Sequence664010843 (3)gb|EYU39736.1|1e-54hypothetical protein MIMGU_mgv1a003228mg [Erythranthe guttata]853005780 (2)ref|XP_008218485.1|6e-85PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase ARI8 [Prun

Alignment

This contig is upended


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JMSF040D07+ TGCT
                      ____________________________________________________________
consensus TGCT
 
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JMFS056D09+ CAAAAAGGATGGCCGCAAGCAGCAGAACTAATTCC
JMSF040D07+ AATATACCCTTGCCAGCATGTGACACAAAAAGGATGGCCGCAAGCAGCAGAACTAATTCC
                      ____________________________________________________________
consensus AATATACCCTTGCCAGCATGTGACACAAAAAGGATGGCCGCAAGCAGCAGAACTAATTCC
 
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JMFS056D09+ ATCACGAGGATACGTCTCAAAACAGATCCCACAAGTTATCTCTTTTTCATTAGGAAGTGG
JMSF040D07+ ATCACGAGGATACGTCTCAAAACAGATCCCACAAGTTATCTCTTTTTCATTAGGAAGTGG
                      ____________________________________________________________
consensus ATCACGAGGATACGTCTCAAAACAGATCCCACAAGTTATCTCTTTTTCATTAGGAAGTGG
 
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JMFS056D09+ AGTAGGATTCTCTAACAAGCCAACAGTCCTGCGAACCTTCTCTTCATCTGCAAACCATTC
JMSF040D07+ AGTAGGATTCTCTAACAAGCCAACAGTCCTGCGAACCTTCTCTTCATCTGCAAACCATTC
                      ____________________________________________________________
consensus AGTAGGATTCTCTAACAAGCCAACAGTCCTGCGAACCTTCTCTTCATCTGCAAACCATTC
 
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JMFS056D09+ ATCGTTCACTTTACTGACACTCCAGTTAAAATGGCGAAGCAAGATGCCGGCTGCATCCTT
JMSF040D07+ ATCGTTCACTTTACTGACACTCCAGTTAAAATGGCGAAGCAAGATGCCGGCTGCATCCTT
                      ____________________________________________________________
consensus ATCGTTCACTTTACTGACACTCCAGTTAAAATGGCGAAGCAAGATGCCGGCTGCATCCTT
 
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JMFS056D09+ TGATATGGAAAGCACCGTAGCTATCTTCATCATAGTTTCTTCTTGACGTTGACGTATATC
JMSF040D07+ TGATATGGAAAGCACCGTAGCTATCTTCATCATAGTTTCTTCTTGACGTTGACGTATATC
                      ____________________________________________________________
consensus TGATATGGAAAGCACCGTAGCTATCTTCATCATAGTTTCTTCTTGACGTTGACGTATATC
 
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JMFS056D09+ AGCTTCGTTCAAAATGGTATAGTTGGTCTGGGAGCGATAATGGGAGACGAGGCTGTCGGA
JMSF040D07+ AGCTTCGTTCAAAATGGTATAGTTGGTCTGGGAGCGATAATGGGAGACGAGGCTGTCGGA
                      ____________________________________________________________
consensus AGCTTCGTTCAAAATGGTATAGTTGGTCTGGGAGCGATAATGGGAGACGAGGCTGTCGGA
 
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JMFS056D09+ ATCATCAGAGTCGTTGTCGATGAAGTCGTAATCCATGATGACGTCATCGTCGTCGGAGTC
JMFF034B21+ ATGACGTCATCGTCGTCGGAGTC
JMSF040D07+ ATCATCAGAGTCGTTGTCGATGAAGTCGTAATCCATGATGACGTCATCGTCGTCGGAGTC
                      ____________________________________________________________
consensus ATCATCAGAGTCGTTGTCGATGAAGTCGTAATCCATGATGACGTCATCGTCGTCGGAGTC
 
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JMFS056D09+ TTCGATGCGTCCACATCCGCCGCCGCCGTAGAAGTCGTCGTCTTCGTAGGAGTCTCCGTC
JMFF034B21+ TTCGATGCGTCCACATCCGCCGCCGCCGTAGAAGTCGTCGTCTTCGTAGGAGTCTCCGTC
JMSF040D07+ TTCGATGCGTCCACATCCGCCGCCGCCGTAGAAGTCGTCGTCTTCGTAGGAGTCTCCGTC
                      ____________________________________________________________
consensus TTCGATGCGTCCACATCCGCCGCCGCCGTAGAAGTCGTCGTCTTCGTAGGAGTCTCCGTC
 
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JMFS056D09+ GTCCGCCATTATCATTTCGTCGCCAGATTCCATTCGCACCTCTCGGCTCTCTCTCTCTCT
JMFF034B21+ GTCCGCCATTATCATTTCGTCGCCAGATTCCATTCTCACCTCTCGGCTCTCTCTCTCTCT
JMSF040D07+ GTCCGCCATTATCATTTCGTCGCCAGATTCCATTCGCACCTCTCGGCTCTCTCTCTCTCT
                      ____________________________________________________________
consensus GTCCGCCATTATCATTTCGTCGCCAGATTCCATTCGCACCTCTCGGCTCTCTCTCTCTCT
 
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JMFS056D09+ CTCTCTCCCTCCCTCCCTCTCTCTTCAACGGAAATTGTAAAAAGCTCTAG
JMFF034B21+ CTCTCTCCCTCCCTCCCTCTCTCTTCAACGGAAATTGTAAAAAGCTCTAG
JMSF040D07+ CTCTCTCCCTCCCTCCCTCTCTCTTCAACGGAAATTGTAAAAAGCTCTAGAAATGACTCA
                      ____________________________________________________________
consensus CTCTCTCCCTCCCTCCCTCTCTCTTCAACGGAAATTGTAAAAAGCTCTAGAAATGACTCA
 
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JMSF040D07+ TCTTTTGGAAAGAAGCTTTTGTTATTCACTCCCCATTTTATATTGGTGGAACACAGTACC
                      ____________________________________________________________
consensus TCTTTTGGAAAGAAGCTTTTGTTATTCACTCCCCATTTTATATTGGTGGAACACAGTACC