Contig 010842:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039P14-                                       TCTTTTGTTAAATTCACGACAATTCTTACAA
                      ____________________________________________________________
consensus                                          TCTTTTGTTAAATTCACGACAATTCTTACAA
 
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rJMFF024P02-                                                             TGTAGCTAT
rJMSF039P14-          GTATTTGCACACGTTGTTAGAGTTTATATTCGGCCAATCATTATTAAAACATGTAGCTAT
                      ____________________________________________________________
consensus             GTATTTGCACACGTTGTTAGAGTTTATATTCGGCCAATCATTATTAAAACATGTAGCTAT
 
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rJMFF024P02-          ACCCCGTGCAGACCCTCGGGTAGCCAAAACATGTAGCAGAAACCCAATGCCCGCACATCT
rJMSF039P14-          ACCCCGTGCAGACCCTCGGGTAGCCAAAACATGTAGCAGAAACCCAATGCCCGCACATCT
                      ____________________________________________________________
consensus             ACCCCGTGCAGACCCTCGGGTAGCCAAAACATGTAGCAGAAACCCAATGCCCGCACATCT
 
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rJMFF024P02-          TCAGATAGTGACTGCAGGTTTCGGGTTTCCCTCGCCGCTAATAACACTTTGAATTCAATT
rJMSF039P14-          TCAGATAGTGACTGCAGGTTTCGGGTTTCCCTCGCCGCTAATAACACTTTGAATTCAATT
                      ____________________________________________________________
consensus             TCAGATAGTGACTGCAGGTTTCGGGTTTCCCTCGCCGCTAATAACACTTTGAATTCAATT
 
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rJMFF024P02-          GTAAGTAAGCCTTTTAAGGCTGCACAATGATTTTCCCTGTGGCATGCCCATCAATGCTCA
rJMSF039P14-          GTAAGTAAGCCTTTTAAGGCTGCACAATGATTTTCCCTGTGGCATGCCCATCAATGCTCA
                      ____________________________________________________________
consensus             GTAAGTAAGCCTTTTAAGGCTGCACAATGATTTTCCCTGTGGCATGCCCATCAATGCTCA
 
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rJMFF024P02-          TAGCCCAAGCTTCTTCTGCCTTGCTTAGAGGATGTTTAGAGTCAATCACACTCTTCAGCT
rJMSF039P14-          TAGCCCAAGCTTCTTCTGCCTTGCTTAGAGGATGTTTAGAGTCAATCACACTCTTCAGCT
                      ____________________________________________________________
consensus             TAGCCCAAGCTTCTTCTGCCTTGCTTAGAGGATGTTTAGAGTCAATCACACTCTTCAGCT
 
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rJMFF024P02-          TCCCCTCCTTCACCAACCCAACAAGATACTCCAGGTTCTCACTCTTGGGGATTAGAAGCA
rJMSF039P14-          TCCCCTCCTTCACCAACCCAACAAGATACTCCAGGTTCTCACTCTTGGGGATTAGAAGCA
                      ____________________________________________________________
consensus             TCCCCTCCTTCACCAACCCAACAAGATACTCCAGGTTCTCACTCTTGGGGATTAGAAGCA
 
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rJMFF024P02-          ATGGCACCAATTGCTTCTTCGACATCGTGAGTTTCTTCACCGCGAACGTCCACATGGCGC
rJMSF039P14-          ATGGCACCAATTGCTTCTTCGACATCGTGAGTTTCTTCACCGCGAACGTCCACATGGCGC
                      ____________________________________________________________
consensus             ATGGCACCAATTGCTTCTTCGACATCGTGAGTTTCTTCACCGCGAACGTCCACATGGCGC
 
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rJMFF024P02-          TAGCCCCGGGGGTGAGGTCGATCACCTTGCCTTTCTTGCTCAGGTTTGGCTCGAAAGTAG
rJMSF039P14-          TAGCCCCGGGGGTGAGGTCGATCACCTTGCCTTTCTTGCTCAGGTTTGGCTCGAAAGTAG
                      ____________________________________________________________
consensus             TAGCCCCGGGGGTGAGGTCGATCACCTTGCCTTTCTTGCTCAGGTTTGGCTCGAAAGTAG
 
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rJMFF024P02-          ACCAGGGAATGCCCGTGGCGCAGTGGATCACCGCGTCGTATGTTTGCAACGAAAGGCTCT
rJMSF039P14-          ACCAGGGAATGCCCGTGGCGCAGTGGATCACCGCGTCGTATGTTTGCAACGAAGGGCTCT
                      ____________________________________________________________
consensus             ACCAGGGAATGCCCGTGGCGCAGTGGATCACCGCGTCGTATGTTTGCAACGAAGGGCTCT
 
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rJMFF024P02-          TGAGAGCTGCCCCGTCTGGGGTCTTGTAGTCAATAACCTCGTCTGCCCCTAAGCTCTTCA
rJMSF039P14-          TGAGAGCTGCCCCGTCTGGGGTCTTGTAGTCAATAACCTCGTCTGCCCCTAAGCTCTTCA
JMFS088B06+                                                                    TCA
                      ____________________________________________________________
consensus             TGAGAGCTGCCCCGTCTGGGGTCTTGTAGTCAATAACCTCGTCTGCCCCTAAGCTCTTCA
 
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rJMFF024P02-          CGAACCCGAGGTTGCGGGCCCCACAGGTAGCGGTAACGTGTGCGTTCCCGAGCTTTGCTA
rJMSF039P14-          CGAACCCGAGGTTGCGGGCCCCACAGGTAGCGGTAACGTGTGCGTTCCCGAGCTTTGCTA
JMFS088B06+           CGAACCCGAGGTTGCGGGCCCCACAGGTAGCGGTAACGTGTGCGTTCCCGAGCTTTGCTA
JMSF039P14+                                                                 TTGCTA
                      ____________________________________________________________
consensus             CGAACCCGAGGTTGCGGGCCCCACAGGTAGCGGTAACGTGTGCGTTCCCGAGCTTTGCTA
 
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rJMFF024P02-          GTTGAACCGCATAGTGACCCACACCACCAGAGGCGGCTGTCACGAGTATGTTCTTCTGGG
rJMSF039P14-          GTTGAACCGCATAGTGACCCACACCACCAGAGGCGGCTGTCACGAGTATGTTCTTCTGGG
JMFS088B06+           GTTGAACCGCATAGTGACCCACACCACCAGAGGCGGCTGTCACGAGTATGTTCTTCTGGG
JMSF039P14+           GTTGAACCGCATAGTGACCCACACCACCAGAGGCGGCTGTCACGAGTATGTTCTTCTGGG
                      ____________________________________________________________
consensus             GTTGAACCGCATAGTGACCCACACCACCAGAGGCGGCTGTCACGAGTATGTTCTTCTGGG
 
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rJMFF024P02-          GCCCACTCCCGTCGAGCTTCACCCCAGCAGCTCCA                         
rJMSF039P14-          GCCCACTCCCGTCGAGCTTCACCCCAGCAGCTCCAACGAGGGCCTGGAGAGCTGTTAGGC
JMFS088B06+           GCCCACTCCCGTCGAGCTTCACCCCAGCAGCTCCAACGAGGGCCTGGAGAGCTGTTAGGC
JMFF024P02+             CCACTCCCGTCGAGCTTCACCCCAGCAGCTCCAACGAGGGCCTGGAGAGCTGTTAGGC
JMSF039P14+           GCCCACTCCCGTCGAGCTTCACCCCAGCAGCTCCAACGAGGGCCTGGAGAGCTGTTAGGC
                      ____________________________________________________________
consensus             GCCCACTCCCGTCGAGCTTCACCCCAGCAGCTCCAACGAGGGCCTGGAGAGCTGTTAGGC
 
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rJMSF039P14-          CTGCGACAGGAAGGCCTGCAGCTT                                    
JMFS088B06+           CTGCGACAGGAAGGCCTGCAGCTTCGGCAGGCGATACCTCCGGTGGCCTTATGGCAGTTA
JMFF024P02+           CTGCGACAGGAAGGCCTGCAGCTTCGGCAGGCGATACCTCCGGTGGCCTTATGGCAGTTA
JMSF039P14+           CTGCGACAGGAAGGCCTGCAGCTTCGGCAGGCGATACCTCCGGTGGCCTTATGGCAGTTA
                      ____________________________________________________________
consensus             CTGCGACAGGAAGGCCTGCAGCTTCGGCAGGCGATACCTCCGGTGGCCTTATGGCAGTTA
 
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JMFS088B06+           AGCTCTCCTTAGCTACAGCATACTCCGCAAATCCACCTCCAGTAAGATGACTGAGCATAG
JMFF024P02+           AGCTCTCCTTAGCTACAGCATACTCCGCAAATCCACCTCCAGTAAGATGACTGAGCATAG
JMSF039P14+           AGCTCTCCTTAGCTACAGCATACTCCGCAAATCCACCTCCAGTAAGATGACTGAGCATAG
                      ____________________________________________________________
consensus             AGCTCTCCTTAGCTACAGCATACTCCGCAAATCCACCTCCAGTAAGATGACTGAGCATAG
 
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JMFS088B06+           CCACAACTTTGTCACCGACCTTGAAATTCTTGACACCAGCCCCAACCTCCACTACTTCTC
JMFF024P02+           CCACAACTTTGTCACCGACCTTGAAATTCTTGACACCAGCCCCAACCTCCACTACTTCTC
JMSF039P14+           CCACAACTTTGTCACCGACCTTGAAATTCTTGACACCAGCCCCAACCTCCACTACTTCTC
                      ____________________________________________________________
consensus             CCACAACTTTGTCACCGACCTTGAAATTCTTGACACCAGCCCCAACCTCCACTACTTCTC
 
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JMFS088B06+           CCGCTACATCAGTAGCGGGGATGTAAGGAAATTTGCCAGGAAGAAGAGGACGGATCATCC
JMFF024P02+           CCGCTACATCAGTAGCGGGGATGTAAGGAAATTTGCCAGGAAGAAGAGGACGGATCATCC
JMSF039P14+           CCGCTACATCAGTAGCGGGGATGTAAGGAAATTTGCCAGGAAGAAGAGGACGGATCATCC
                      ____________________________________________________________
consensus             CCGCTACATCAGTAGCGGGGATGTAAGGAAATTTGCCAGGAAGAAGAGGACGGATCATCC
 
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JMFS088B06+           CTTTTTGAATTTTCCAATCAACCGGGTTTATGCTTGTTGCTTCTAGCTTTAGCAAGACTT
JMFF024P02+           CTTTTTGAATTTTCCAATCAACCGGGTTTATGCTTGTTGCTTCTAGCTTTAGCAAGACTT
JMSF039P14+           CTTTTTGAATTTTCCAATCAACCGGGTTTATGCTTGTTGCTTCTAGCTTTAGCAAGACTT
                      ____________________________________________________________
consensus             CTTTTTGAATTTTCCAATCAACCGGGTTTATGCTTGTTGCTTCTAGCTTTAGCAAGACTT
 
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JMFS088B06+           CATTTTTATTAGGAGTGGGCACAGGAACTTCAATGTGCTTCAAACCAGCAGCGCCGCCTC
JMFF024P02+           CATTTTTATTAGGAGTGGGCACAGGAACTTCAATGTGCTTCAAACCAGCAGCGCCGCCTC
JMSF039P14+           CATTTTTATTAGGAGTGGGCACAGGAACTTCAATGTGCTTCAAACCAGCAGCGCCGCCTC
                      ____________________________________________________________
consensus             CATTTTTATTAGGAGTGGGCACAGGAACTTCAATGTGCTTCAAACCAGCAGCGCCGCCTC
 
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JMFS088B06+           CATACCCGTCATACTGCAAAGCGCGCATAAGCTTTCCTGCCATTCCCAGATGCACAAAGT
JMFF024P02+           CATACCCGTCATACTGCAAAGCGCGCATAAGCTTTCCTGCCATTCCCAGATGCACAAAGT
JMSF039P14+           CATACCCGTCATACTGCAAAGCGCGCATAAGCTTTCCTGCCATTCCCAGATGCACAAAGT
                      ____________________________________________________________
consensus             CATACCCGTCATACTGCAAAGCGCGCATAAGCTTTCCTGCCATTCCCAGATGCACAAAGT
 
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JMFS088B06+           CGAGTGGT                                                    
JMFF024P02+           CGAGTGGTTCGCAGAGCAAGAAT                                     
JMSF039P14+           CGAGTGGTTCGCAGAGCAAGAATAGTGACGAAATTGTGGGCAAAAGTGGATTTTATGTAA
                      ____________________________________________________________
consensus             CGAGTGGTTCGCAGAGCAAGAATAGTGACGAAATTGTGGGCAAAAGTGGATTTTATGTAA
 
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JMSF039P14+           TAGCCTTGTGCGTGTCGCCGATCCTTTGTATGGTTTGTGTTACTCGACAAGCGCATCCCC
                      ____________________________________________________________
consensus             TAGCCTTGTGCGTGTCGCCGATCCTTTGTATGGTTTGTGTTACTCGACAAGCGCATCCCC