Contig 010841:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040M10Sequence564010841 (4)ref|XP_009605511.1|2e-82PREDICTED: acyl-coenzyme A thioesterase 8-like isoform X2 [Nicotiana tomentosif765013024 (6)ref|XP_009119726.1|5e-74PREDICTED: acyl-coenzyme A thioesterase 8 isoform X1 [Brassica rapa]
JMFS136C11Sequence626010841 (4)emb|CDP08822.1|7e-104unnamed protein product [Coffea canephora]
JMFS157D10Sequence635010841 (4)emb|CDP08822.1|9e-99unnamed protein product [Coffea canephora]
JMSF039P03Sequence679010841 (4)emb|CDP08822.1|4e-107unnamed protein product [Coffea canephora]888013024 (6)gb|AIL29214.1|9e-93acyl-CoA thioesterase [Camellia oleifera]

Alignment

This contig is upended


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JMFS136C11+                                                              AAAATCCCC
JMSF039P03+                                                    TCGGTATATCAAAATCCCC
                      ____________________________________________________________
consensus                                                      TCGGTATATCAAAATCCCC
 
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JMFS136C11+           AGCTAAAAGGAAGTGGGCATGCAAACTATGAACAATCTTGAGACAACCAACGGTTTTTGT
JMFS157D10+               AAAAGGAAGTGGGCATGCAAACTATGAACAATCTTGAGACAATCAACGGTTTTTGT
JMSF039P03+           AGCTAAAAGGAAGTGGGCATGCAAACTATGAACAATCTTGAGACAATCAACGGTTTTTGT
                      ____________________________________________________________
consensus             AGCTAAAAGGAAGTGGGCATGCAAACTATGAACAATCTTGAGACAATCAACGGTTTTTGT
 
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JMFS136C11+           GGCTGCAGCTAATGCCTGCCCCATGAATTGACCACCAAATACTTTACCAAATTTTGGAGC
JMFS157D10+           GGCTGCAGCTAATGCCTGCCCCATGAATTGACCACCAAATACTTTACCAAATTTTGGAGC
JMFF040M10+                                             CCAAATACTTTACCAAATTTTGGAGC
JMSF039P03+           GGCTGCAGCTAATGCCTGCCCCATGAATTGACCACCAAATACTTTACCAAATTTTGGAGC
                      ____________________________________________________________
consensus             GGCTGCAGCTAATGCCTGCCCCATGAATTGACCACCAAATACTTTACCAAATTTTGGAGC
 
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JMFS136C11+           ATCAGGCAATGTGATACCTCGGAAAATATTCACTTCTATAGGTTCCAAATGCAATATGTG
JMFS157D10+           ATCAGGCAATGTGATACCTCGGAAAATATTCACTTCTATAGGTTCCAAATGCAATATGTG
JMFF040M10+           ATCAGGCAATGTGATACCTCGGAAAATATTCACTTCTATAGGTTCCAAATGCAATATGTG
JMSF039P03+           ATCAGGCAATGTGATACCTCGGAAAATATTCACTTCTATAGGTTCCAAATGCAATATGTG
                      ____________________________________________________________
consensus             ATCAGGCAATGTGATACCTCGGAAAATATTCACTTCTATAGGTTCCAAATGCAATATGTG
 
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JMFS136C11+           TTCCACAAGGGAGCAATTGTCTACTGATTTGTCAGCATTCCAGATCGATTTTGGATGTAG
JMFS157D10+           TTCCACAAGGGAGCAATTGTCTACTGATTTGTCAGCATTCCAGATCGATTTTGGATGTAG
JMFF040M10+           TTCCACAAGGGAGCAATTGTCTACTGATTTGTCAGCATTCCAGATCGATTTTGGATGTAG
JMSF039P03+           TTCCACAAGGGAGCAATTGTCTACTGATTTGTCAGCATTCCAGATCGATTTTGGATGTAG
                      ____________________________________________________________
consensus             TTCCACAAGGGAGCAATTGTCTACTGATTTGTCAGCATTCCAGATCGATTTTGGATGTAG
 
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JMFS136C11+           CAGACTACTATATTCATGAGGCAGCACTAAGCAGGTTAGTTTAGTGAGTGCAATTACATC
JMFS157D10+           CAGACTACTATATTCATGAGGCAGCACTAAGCAGGTTAGTTTAGTGAGTGCAATTACATC
JMFF040M10+           CAGACTACTATATTCATGAGGCAGCACAAAGCAGGTTAGTTTAGTGAGTGCAATTACATC
JMSF039P03+           CAGACTACTATATTCATGAGGCAGCACTAAGCAGGTTAGTTTAGTGAGTGCAATTACATC
                      ____________________________________________________________
consensus             CAGACTACTATATTCATGAGGCAGCACTAAGCAGGTTAGTTTAGTGAGTGCAATTACATC
 
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JMFS136C11+           AGCATGCTGAGCCGATGATGCCAGGCCATGACCAAAATAATCATATTGTTTCAACTGAAA
JMFS157D10+           AGCATGCTGAGCCGATGATGCCAGGCCATGACGGAGATGATGATATTGTTTCAACTGAAA
JMFF040M10+           AGCATGCTGAGCCGATGATGCCAGGCCATGACCAAAATAATCATATTGTTTCAACTGAAA
JMSF039P03+           AGCATGCTGAGCCGATGATGCCAGGCCATGACCAAAATAATCATATTGTTTCAACTGAAA
                      ____________________________________________________________
consensus             AGCATGCTGAGCCGATGATGCCAGGCCATGACCAAAATAATCATATTGTTTCAACTGAAA
 
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JMFS136C11+           TTCAGTACGGTTTTCATCATCAGTGTGGCCAGAACCACAAACTTCAGCCTGTCCATCCCA
JMFS157D10+           TTCAGTACGGTTTTCATCATCAGTGTGGCCAGAACCACAAACTTCAGCCTGTCCATCCCA
JMFF040M10+           TTCAGTACGGTTTTCATCATCAGTGTGGCCAGAACCACAAACTTCAGCCTGTCCATCCCA
JMSF039P03+           TTCAGTACGGTTTTCATCATCAGTGTGGCCAGAACCACAAACTTCAGCCTGTCCATCCCA
                      ____________________________________________________________
consensus             TTCAGTACGGTTTTCATCATCAGTGTGGCCAGAACCACAAACTTCAGCCTGTCCATCCCA
 
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JMFS136C11+           TATGAAGTAAATCCCATCCCCAGCTTCCCCTTCGCGTAGCACATAATCACCCCTATCATA
JMFS157D10+           TATGAAGTAAATCCCATCCCCAGCTTCCCCTTCGCGTAGCACATAATCACCCCTATCATA
JMFF040M10+           TATGAAGTAAATCCCATCCCCAGCTTCCCCTTCGCGTAGCACATAATCACCCCTATCATA
JMSF039P03+           TATGAAGTAAATCCCATCCCCAGCTTCCCCTTCGCGTAGCACATAATCACCCCTATCATA
                      ____________________________________________________________
consensus             TATGAAGTAAATCCCATCCCCAGCTTCCCCTTCGCGTAGCACATAATCACCCCTATCATA
 
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JMFS136C11+           ATTCTTAACTGCAACGAGCTGTGAGATCCTCTCGACAGAAGACCTCGGCAATCTCTGAAG
JMFS157D10+           ATTCTTAACTGCAACGAGCTGTGAGATCCTCTCGACAGAAGACCTCGGCAATCTCTGAAG
JMFF040M10+           ATTCTTAACTGCAACGAGCTGTGAGATCCTCTCGACAGAAGACCTCGGCAATCTCTGAAG
JMSF039P03+           ATTCTTAACTGCAACGAGCTGTGAGATCCTCTCGACAGAAGACCTCGGCAATCTCTGAAG
                      ____________________________________________________________
consensus             ATTCTTAACTGCAACGAGCTGTGAGATCCTCTCGACAGAAGACCTCGGCAATCTCTGAAG
 
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JMFS136C11+           CAACGCCACGCAGCTCAAAAATTCCGCTACAGATTCAATTTCCATTTTCAAGCTTCTTCA
JMFS157D10+           CAACGCCACGCAGCTCAAAAATTCCGCTACAGATTCAATTTCCATTTTCAAGCTTCTTCA
JMFF040M10+           CAACGCCACGCAGCTCAAAAATTCCGCTACAGATTCAATTTCCATTTTCAAGCTTCTTCA
JMSF039P03+           CAACGCCACGCAGCTCAAAAATTCCGCTACAGATTCAATTTCCATTTTCAAGCTTCTTCA
                      ____________________________________________________________
consensus             CAACGCCACGCAGCTCAAAAATTCCGCTACAGATTCAATTTCCATTTTCAAGCTTCTTCA
 
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JMFS136C11+           GTGACGGAGAAGAATGA                                           
JMFS157D10+           GTGACGGAGAAGAATGACGAACGACGCCGCGAAACTGAC                     
JMFF040M10+           GTGACGGAGAAGAATGACGAACGACGCCGCGAAACTGACAAAATCAATCCAGAAAC    
JMSF039P03+           GTGACGGAGAAGAATGACGAACGACGCCGCGAAACTGACAAAATCAATCCAGAAACTCCA
                      ____________________________________________________________
consensus             GTGACGGAGAAGAATGACGAACGACGCCGCGAAACTGACAAAATCAATCCAGAAACTCCA