Contig 010835:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041M01Sequence639010835 (3)ref|XP_004234663.1|4e-76PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Solanum lycope535001183 (3)ref|XP_009783411.1|3e-30PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Nicotiana sylv
JMSF001N19Sequence297010835 (3)764001183 (3)ref|XP_009783411.1|6e-81PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Nicotiana sylv
JMSF039F20Sequence714010835 (3)ref|XP_004234663.1|6e-92PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Solanum lycope876001183 (3)ref|XP_009783411.1|4e-101PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Nicotiana sylv

Alignment

This contig is upended


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JMSF039F20+                 ATTAGCCAGTTTTTCTACCAGAGACCTGACTAGAGAAAGATTATCCATAAGGAA
                      ____________________________________________________________
consensus                   ATTAGCCAGTTTTTCTACCAGAGACCTGACTAGAGAAAGATTATCCATAAGGAA
 
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JMFF041M01+                            GCCTTGCAATACGCTGGGGGCACCCAAAGTTGATGTCCACATA
JMSF039F20+           AGCTCCATAGTTCCCCCGCCTTGCAATACGCTGGGGGCACCCAAAGTTGATGTCCACATA
                      ____________________________________________________________
consensus             AGCTCCATAGTTCCCCCGCCTTGCAATACGCTGGGGGCACCCAAAGTTGATGTCCACATA
 
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JMFF041M01+           ATCACAATACGGTTCAACTCTTTGAGCAGCTTCCAGCAAAATTTCAGGGTCATTTGCACA
JMSF039F20+           ATCACAATACGGTTCAACTCTTTGAGCAGCTTCCAGCAAAATTTCAGGGTCATTTGCACA
                      ____________________________________________________________
consensus             ATCACAATACGGTTCAACTCTTTGAGCAGCTTCCAGCAAAATTTCAGGGTCATTTGCACA
 
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JMFF041M01+           GAATTGAACAAACAGTGGTCGGTCCTCCTTGCAAGTAGTGAATTCTAGAGATCGATACTT
JMSF039F20+           GAATTGAACAAACAGTGGTCGGTCCTCCTTGCAAGTAGTGAATTCTAGAGATCGATACTT
                      ____________________________________________________________
consensus             GAATTGAACAAACAGTGGTCGGTCCTCCTTGCAAGTAGTGAATTCTAGAGATCGATACTT
 
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JMFF041M01+           CTCATTCTCGGTGAAAATACGGGAATGGAGCATAGGCGTATATGCAGCTTGGGCGCCAAA
JMSF039F20+           GTCATTCTCGGTGAAAATACGGGAATGGAGCATAGGCGTATATGCAGCTTGGGCGCCAAA
                      ____________________________________________________________
consensus             GTCATTCTCGGTGAAAATACGGGAATGGAGCATAGGCGTATATGCAGCTTGGGCGCCAAA
 
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JMFF041M01+           CTTACGACAAAGCATACGAAAAGGAAGCTCGGAGTTGTCGACCATGGGGGCGACTATGTA
JMSF039F20+           CTTACGACAAAGCATACGAAAAGGAAGCTCGGAGTTGTCGACCATGGGGGCGACTATGTA
                      ____________________________________________________________
consensus             CTTACGACAAAGCATACGAAAAGGAAGCTCGGAGTTGTCGACCATGGGGGCGACTATGTA
 
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JMFF041M01+           TTTGGGCTGCCCCAGCATTTTCCAGTGAGCCCAAGCTCTCTCAATCCGCGCTTCCCCACT
JMSF039F20+           TTTGGGCTGCCCCAGCATTTTCCAGTGAGCCCAAGCTCTCTCAATCCGCGCTTCCCCACT
                      ____________________________________________________________
consensus             TTTGGGCTGCCCCAGCATTTTCCAGTGAGCCCAAGCTCTCTCAATCCGCGCTTCCCCACT
 
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JMFF041M01+           CAAGTACCCATGCGGACGCCCCAAATCAGAAGACGGAAAGTTTTGTTCCTCCGAGTTGAG
JMSF001N19+           CAAGTACCCATGCGGACGCCCCAAATCAGAAGACGGAAAGTTTTGTTCCTCCGAGTTGAG
JMSF039F20+           CAAGTACCCATGCGGACGCCCCAAATCAGAAGACGGAAAGTTTTGTTCCTCCGAGTTGAG
                      ____________________________________________________________
consensus             CAAGTACCCATGCGGACGCCCCAAATCAGAAGACGGAAAGTTTTGTTCCTCCGAGTTGAG
 
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JMFF041M01+           GGCCGTGGGTTCGGCGTTCTCTGCGCAGAGAAGGTCGTCTTCGATGCGGGGAAGGTCTGC
JMSF001N19+           GGCCGTGGGTTCGGCGTTCTCTGCGCAGAGAAGGTCGTCTTCGATGCGGGGAAGGTCTGC
JMSF039F20+           GGCCGTGGGTTCGGCGTTCTCTGCGCAGAGAAGGTCGTCTTCGATGCGGGGAAGGTCTGC
                      ____________________________________________________________
consensus             GGCCGTGGGTTCGGCGTTCTCTGCGCAGAGAAGGTCGTCTTCGATGCGGGGAAGGTCTGC
 
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JMFF041M01+           AGAAGAGGCAGCTACAGCTTGGGCGGCCATGGAATGGGTTTGGCGGAAGGTTGAGCAGGA
JMSF001N19+           AGAAGAGGCAGCTACAGCTTGGGCGGCCATGGAATGGGTTTGGCGGAAGGTTGAGCAGGA
JMSF039F20+           AGAAGAGGCAGCTACAGCTTGGGCGGCCATGGAATGGGTTTGGCGGAAGGTTGAGCAGGA
                      ____________________________________________________________
consensus             AGAAGAGGCAGCTACAGCTTGGGCGGCCATGGAATGGGTTTGGCGGAAGGTTGAGCAGGA
 
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JMFF041M01+           GGAGTTTGGTTTCCGGAAGAGAGAAAGAGCGGAGATGTGTTTGAATGTCATTAGGAGGCC
JMSF001N19+           GGAGTTTGGTTTCCGGAAGAGAGAAAGAGCGGAGATGTGTTTGAATGTCATTAGGAGGCC
JMSF039F20+           GGAGTTTGGTTTCCGGAAGAGAGAAAGAGCGGAGATGTGTTTGAATGTCATTAGGAGGCC
                      ____________________________________________________________
consensus             GGAGTTTGGTTTCCGGAAGAGAGAAAGAGCGGAGATGTGTTTGAATGTCATTAGGAGGCC
 
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JMFF041M01+           ATGGGAAGAGCTGAGCAACCCATCGCCGCCTTTGTGCGGAGGAATGAACCGCGCAC    
JMSF001N19+           ATGGGAAGAGCTGAGCAACCCATCGCCGCCTTTGTGCGGAGGAATGAACCGCGCAC    
JMSF039F20+           ATGGGAAGAGCTGAGCAACCCATCGCCGCCTTTGTGCGGAGGAATGAACCGCGCACGGTC
                      ____________________________________________________________
consensus             ATGGGAAGAGCTGAGCAACCCATCGCCGCCTTTGTGCGGAGGAATGAACCGCGCACGGTC