Contig 010833:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF043L16-           ACCCTGGAGAGTTTTTTTTTTTTTTTTGTTCTTTACTATTATGGCATTCATGGCTCTTG
                      ____________________________________________________________
consensus              ACCCTGGAGAGTTTTTTTTTTTTTTTTGTTCTTTACTATTATGGCATTCATGGCTCTTG
 
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rJMFF043L16-          TGACAGATTTTGTATGAATACATAAAGACATCACTGGAGAGTATGACTGTTGTGTGTAGA
                      ____________________________________________________________
consensus             TGACAGATTTTGTATGAATACATAAAGACATCACTGGAGAGTATGACTGTTGTGTGTAGA
 
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rJMSF039C24-               AATTCATGAAAGGCCAATTCNNCACTCTAAACAAATTCCTGTGCAGGAGTTGACA
rJMFF043L16-          AATAGAATTCATGAAAGGCCAATTCAACACTCTAAACAAATTCCTGTGCAGGAGTTGACA
                      ____________________________________________________________
consensus             AATAGAATTCATGAAAGGCCAATTCAACACTCTAAACAAATTCCTGTGCAGGAGTTGACA
 
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rJMSF039C24-          ACNCAACTCATTATATTTAACCAAACATAANAATATAGATACAGACCANCAGGGNGCATT
rJMFF043L16-          ACACAACTCATTATATTTAACCAAACATAAGAATATAGATACAGACCAACAGGGTGCATT
                      ____________________________________________________________
consensus             ACACAACTCATTATATTTAACCAAACATAAGAATATAGATACAGACCAACAGGGTGCATT
 
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rJMSF039C24-          TCTCCGCTGCACATATGATAANGGAGGTTAACCGCANCANGAACTGGTANTGGNGGCTCT
rJMFF043L16-          TCTCCGCTGCACATATGATAATGGAGGTTAACCGCAGCAAGAACTGGTAGTGGTGGCTCT
                      ____________________________________________________________
consensus             TCTCCGCTGCACATATGATAATGGAGGTTAACCGCAGCAAGAACTGGTAGTGGTGGCTCT
 
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rJMSF039C24-          TNGANCAAATCTGTCCATAANAACCATGCCCNATGGATTTGGNGCAGGCTGCANACGGGG
rJMFF043L16-          TTGAGCAGATCTGTCCATAAGAACCATGCCCGATGGATTTGGTGCAGGCTGCAGACGGGG
                      ____________________________________________________________
consensus             TTGAGCAGATCTGTCCATAAGAACCATGCCCGATGGATTTGGTGCAGGCTGCAGACGGGG
 
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rJMSF039C24-          TAACCTCTTTGCTATTTCATGGAAAACGTCATTGACATTGGTTGCAGTTTTTGCAAACGT
rJMFF043L16-          TAACCTCTTTGCTATTTCATGGAAAACGTCATTGACATTGGTTGCAGTTTTTGCAGACGT
                      ____________________________________________________________
consensus             TAACCTCTTTGCTATTTCATGGAAAACGTCATTGACATTGGTTGCAGTTTTTGCAGACGT
 
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rJMSF039C24-          CTCCNTAAAGAAAAGCCCATTTNCCTCTGCNTATTTTTGNGCTTCCTCGGGNGCAACCTT
rJMFF043L16-          CTCCATAAAGAAAAGCCCATTTTCCTCTGCATATTTTTGTGCTTCCTCGGGTGCAACCTT
JMFF043L16+                                             TTTTGTGCTTCCTCGGGTGCAACCTT
JMSF039C24+                 AAAGAAAAGCCCATTTTCCTCTGCATATTTTTGTGCTTCCTCGGGTGCAACCTT
                      ____________________________________________________________
consensus             CTCCATAAAGAAAAGCCCATTTTCCTCTGCATATTTTTGTGCTTCCTCGGGTGCAACCTT
 
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rJMSF039C24-          NCTTGCNTCTANCAAGTCANCTTTATTNCCANCAAGTGCCANAACCATGTTCTGGTTACC
rJMFF043L16-          TCTTGCATCTAACAAGTCAGCTTTATTTCCAGCAAGTGCCATAACCATGTTCTGGTTACC
JMFF043L16+           TCTTGCATCTAACAAGTCAGCTTTATTTCCAGCAAGTGCCATAACCATGTTCTGGTTACC
JMSF039C24+           TCTTGCATCTAACAAGTCAGCTTTATTTCCAGCAAGTGCCATAACCATGTTCTGGTTACC
                      ____________________________________________________________
consensus             TCTTGCATCTAACAAGTCAGCTTTATTTCCAGCAAGTGCCATAACCATGTTCTGGTTACC
 
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rJMSF039C24-          TTGTGCCTGAAGTNCCTGGACCCNTTTTTTANNTCGTTCAAAGGATGCTNGATTTGTTAT
rJMFF043L16-          TTGTGCCTGAAGTTCCTGGACCCATTTTTTAGCTCGTTCAAAGGATGCTTGATTTGTTAT
JMFF043L16+           TTGTGCCTGAAGTTCCTGGACCCATTTTTTAGCTCGTTCAAAGGATGCTTGATTTGTTAT
JMSF039C24+           TTGTGCCTGAAGTTCCTGGACCCATTTTTTAGCTCGTTCAAAGGATGCTTGATTTGTTAT
                      ____________________________________________________________
consensus             TTGTGCCTGAAGTTCCTGGACCCATTTTTTAGCTCGTTCAAAGGATGCTTGATTTGTTAT
 
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rJMSF039C24-          ATCATACACAATTACGGCA                                         
rJMFF043L16-          ATCATACACAATTACGGCAGCTGCAG                                  
JMFF043L16+           ATCATACACAATTACGGCAGCTGCAGCTCCTCTATAGTACATTGGAGCTAAACTGTGGTA
JMSF039C24+           ATCATACACAATTACGGCAGCTGCAGCTCCTCTATAGTACATTGGAGCTAAACTGTGGTA
                      ____________________________________________________________
consensus             ATCATACACAATTACGGCAGCTGCAGCTCCTCTATAGTACATTGGAGCTAAACTGTGGTA
 
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JMFF043L16+           CCTCTCTTGACCTGCTGTGTCCCATATTTCAAATTTCACAGTTGCATCATTCACTGCCAC
JMSF039C24+           CCTCTCTTGACCTGCTGTGTCCCATATTTCAAATTTCACAGTTGCATCATTCACTGCCAC
                      ____________________________________________________________
consensus             CCTCTCTTGACCTGCTGTGTCCCATATTTCAAATTTCACAGTTGCATCATTCACTGCCAC
 
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JMFF043L16+           TGTTTGTGAGAAAAAAGCAGCTCCTATCGTAGATTCCTGGAATTCAATAAATTGTCCTTT
JMSF039C24+           TGTTTGTGAGAAAAAAGCAGCTCCTATCGTAGATTCCTGGAATTCAATAAATTGTCCTTT
                      ____________________________________________________________
consensus             TGTTTGTGAGAAAAAAGCAGCTCCTATCGTAGATTCCTGGAATTCAATAAATTGTCCTTT
 
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JMFF043L16+           AACAAAACGCAATACCAGACTTGATTTTCCAGCTCCAACATCTCCTAGGAGCACCAGCTT
JMSF039C24+           AACAAAACGCAATACCAGACTTGATTTTCCAGCTCCAACATCTCCTAGGAGCACCAGCTT
                      ____________________________________________________________
consensus             AACAAAACGCAATACCAGACTTGATTTTCCAGCTCCAACATCTCCTAGGAGCACCAGCTT
 
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JMFF043L16+           GGCGTTCATGTTCTTGTTTCCGGCGGTAGCCATGCCTCTGATCGATTCACTTCAGAATAA
JMSF039C24+           GGCGTTCATGTTCTTGTTTCCGGCGGTAGCCATGCCTCTGATCGATTCACTTCAGAATAA
                      ____________________________________________________________
consensus             GGCGTTCATGTTCTTGTTTCCGGCGGTAGCCATGCCTCTGATCGATTCACTTCAGAATAA
 
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JMFF043L16+           AGTAAAAGAATCAGTGTATGGCTCTGATCGATTCAGCTCAGATACAATAAAAGTAGGAAA
JMSF039C24+           AGTAAAAGAATCAGTGTATGGCTCTGATCGATTCAGCTCAGATACAATAAAAGTAGGAAA
                      ____________________________________________________________
consensus             AGTAAAAGAATCAGTGTATGGCTCTGATCGATTCAGCTCAGATACAATAAAAGTAGGAAA
 
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JMFF043L16+           ACTTTAGAGAGTTTCGAGGAGTTGAGTAGACAAGAAGGAGAAGAAGGAGATGATGGAGGT
JMSF039C24+           ACTTTAGAGAGTTTCGAGGAGTTGAGTAGACAAGAAGGAGAAGAAGGAGATGATGGAGGT
                      ____________________________________________________________
consensus             ACTTTAGAGAGTTTCGAGGAGTTGAGTAGACAAGAAGGAGAAGAAGGAGATGATGGAGGT
 
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JMFF043L16+           ATAATTGTCAAGCGAAAGGGAGAAAGGTATATTTCAACCC                    
JMSF039C24+           ATAATTGTCAAGCGAAAGGGAGAAAGGTATATTTCAACCCTGGCTCGCCGTTGACAGTTC
                      ____________________________________________________________
consensus             ATAATTGTCAAGCGAAAGGGAGAAAGGTATATTTCAACCCTGGCTCGCCGTTGACAGTTC