| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF048E05 | Sequence | 460 | 010830 (7) | ref|XP_009801502.1| | 2e-69 | PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re | |||||
| JMFS089H12 | Sequence | 628 | 010830 (7) | ref|XP_009801503.1| | 1e-130 | PREDICTED: delta(24)-sterol reductase-like isoform X2 [Nicotiana sylvestris] | |||||
| JMFS136H12 | Sequence | 612 | 010830 (7) | ref|XP_009801502.1| | 6e-113 | PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re | |||||
| JMFS137F03 | Sequence | 612 | 010830 (7) | ref|XP_009801502.1| | 6e-113 | PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re | |||||
| JMSF004P14 | Sequence | 218 | 010830 (7) | ref|XP_009775727.1| | 1e-17 | PREDICTED: delta(24)-sterol reductase-like [Nicotiana sylvestris] | 195 | 001271 (3) | ref|XP_009804305.1| | 7e-11 | PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1 [Nicotiana sylvestr |
| JMSF032N21 | Sequence | 650 | 010830 (7) | ref|XP_009801502.1| | 2e-118 | PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re | 538 | 001442 (5) | gb|ABD60147.1| | 3e-43 | diminuto [Morus alba] |
| JMSF038O20 | Sequence | 655 | 010830 (7) | ref|XP_009801502.1| | 3e-82 | PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re | 678 | 001442 (5) | gb|EYU19065.1| | 6e-74 | hypothetical protein MIMGU_mgv1a003798mg [Erythranthe guttata] gb|EYU19066.1| hy |
This contig is upended
. : . : . : . : . : . :
JMFS089H12+ GGCATAGAAA
____________________________________________________________
consensus GGCATAGAAA
. : . : . : . : . : . :
JMFS089H12+ AGGTCAGAATATTCATTGTCCTTTGTAGCCCGAACTAACTCTCCGTCCGCTAGAACAATC
JMSF032N21+ GTCCGCTAGAACAATC
____________________________________________________________
consensus AGGTCAGAATATTCATTGTCCTTTGTAGCCCGAACTAACTCTCCGTCCGCTAGAACAATC
. : . : . : . : . : . :
JMFS089H12+ TCGTATGCCACAACAGTGTCAGAAAACAGTCCATATATGTGCGAGCTACCCTCGATACCG
JMFS136H12+ CAACAGTGTCAGAAAACAGTCCATATATGTGCGAGCTACCCTCGATACCG
JMFS137F03+ CAACAGTGTCAGAAAACAGTCCATATATGTGCGAGCTACCCTCGATACCG
JMSF032N21+ TCGTATGCCACAACAGTGTCAGAAAACAGTCCATATATGTGCGAGCTACCCTCGATACCG
____________________________________________________________
consensus TCGTATGCCACAACAGTGTCAGAAAACAGTCCATATATGTGCGAGCTACCCTCGATACCG
. : . : . : . : . : . :
JMFS089H12+ TACCCGTTAATCAGACCGCCAACTGTCAGGTCATCGAGCTCGGCAACAACCGCAAGGGAA
JMFS136H12+ TACCCGTTAATCAGACCGCCAACTGTCAGGTCATCGAGCTCGGCAACAACCGCAAGGGAA
JMFS137F03+ TACCCGTTAATCAGACCGCCAACTGTCAGGTCATCGAGCTCGGCAACAACCGCAAGGGAA
JMSF032N21+ TACCCGTTAATCAGACCGCCAACTGTCAGGTCATCGAGCTCGGCAACAACCGCAAGGGAA
____________________________________________________________
consensus TACCCGTTAATCAGACCGCCAACTGTCAGGTCATCGAGCTCGGCAACAACCGCAAGGGAA
. : . : . : . : . : . :
JMFS089H12+ ACATTCAACGGGACAGTCGCCCTACTGATTTGGCCCATATTCACCAAAGGCTCAACTCGG
JMFS136H12+ ACATTCAACGGGACAGTCGCCCTACTGATTTGGCCCATATTCACCAAAGGCTCAACTCGG
JMFS137F03+ ACATTCAACGGGACAGTCGCCCTACTGATTTGGCCCATATTCACCAAAGGCTCAACTCGG
JMSF032N21+ ACATTCAACGGGACAGTCGCCCTACTGATTTGGCCCATATTCACCAAAGGCTCAACTCGG
JMFF048E05+ G
JMSF038O20+ CAACGGGACAGTCGCCCTACTGATTTGGCCCATATTCACCAAAGGCTCAACTCGG
____________________________________________________________
consensus ACATTCAACGGGACAGTCGCCCTACTGATTTGGCCCATATTCACCAAAGGCTCAACTCGG
. : . : . : . : . : . :
JMFS089H12+ GCAACCATCCTTTCGGTGTCGATATCGAGGATGTTCCTGAACGCGGAAAGATCGACTTCG
JMFS136H12+ GCAACCATCCTTTCGGTGTCGATATCGAGGATGTTCCTGAACGCGGAAAGATCGACTTCG
JMFS137F03+ GCAACCATCCTTTCGGTGTCGATATCGAGGATGTTCCTGAACGCGGAAAGATCGACTTCG
JMSF032N21+ GCAACCATCCTTTCGGTGTCGATATCGAGGATGTTCCTGAACGCGGAAAGATCGACTTCG
JMFF048E05+ GCAACCATCCTTTCGGGGTCGATATGGAGGATGTTCCTGAACGCGGAAAGATGGACTTCG
JMSF038O20+ GCAACCATCCTTTCGGTGTCGATATCGAGGATGTTCCTGAACGCGGAAAGATCGACTTCG
____________________________________________________________
consensus GCAACCATCCTTTCGGTGTCGATATCGAGGATGTTCCTGAACGCGGAAAGATCGACTTCG
. : . : . : . : . : . :
JMFS089H12+ AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
JMFS136H12+ AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
JMFS137F03+ AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
JMSF032N21+ AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
JMFF048E05+ AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
JMSF038O20+ AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
____________________________________________________________
consensus AAATGGCGGGCACGCTTATAGTCTACATTACGCATCCCAACAGCAACCCAGGGCTTTCGA
. : . : . : . : . : . :
JMFS089H12+ GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
JMFS136H12+ GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
JMFS137F03+ GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
JMSF032N21+ GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
JMFF048E05+ GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
JMSF038O20+ GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
____________________________________________________________
consensus GCTGTGCAGACAAGACCATCCTTAGACGCATTCCTTTCTTTCAAACGCTTCATAACCTTC
. : . : . : . : . : . :
JMFS089H12+ TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
JMFS136H12+ TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
JMFS137F03+ TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
JMSF032N21+ TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
JMSF004P14+ ATA
JMFF048E05+ TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
JMSF038O20+ TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
____________________________________________________________
consensus TTAACATTTTCATCGTGTTCCTTCTGTCTTTTCTTGAAAGACTTGCACTCGGATTTCATA
. : . : . : . : . : . :
JMFS089H12+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
JMFS136H12+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
JMFS137F03+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
JMSF032N21+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
JMSF004P14+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
JMFF048E05+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
JMSF038O20+ TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
____________________________________________________________
consensus TCCCCGACATAGATCGCAAAGTAGTACAAGAAAGAGAAGGGAAGGACAACAAATATGACA
. : . : . : . : . : . :
JMFS089H12+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
JMFS136H12+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
JMFS137F03+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
JMSF032N21+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
JMSF004P14+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
JMFF048E05+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
JMSF038O20+ ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
____________________________________________________________
consensus ACGATCCATCGGAACTGAACCAGGATGTCAACCAACCCTTTCTTTCTCTTCGGACGAAGA
. : . : . : . : . : . :
JMFS089H12+ GGGGCCTCAAGGTCCGAC
JMFS136H12+ GGGGCCTCAAGGTCCGACATTGCGGGGAATTGTGATGCCTGAGAAAAAAACAGTGGACCG
JMFS137F03+ GGGGCCTCAAGGTCCGACATTGCGGGGAATTGTGATGCCTGAGAAAAAAACAGTGGACCG
JMSF032N21+ GGGGCCTCAAGGTCCGACATTGCGGGGAATTGTGATGCCTGAGAAAAAAACAGTGGACCG
JMSF004P14+ GGGGCCTCAAGGTCCGACATTGCGGGGAATTGTGATGCCTGAGAAAAAAACAGTGGACCG
JMFF048E05+ GGGGCCTCAAGGTCCGACATGGCGGGGAATTGTGATGCCTGAGAAAAAAACAGTGGACCG
JMSF038O20+ GGGGCCTCAAGGTCCGACATTGCGGGGAATTGTGATGCCCTAAACCCTAAACCATCAACC
____________________________________________________________
consensus GGGGCCTCAAGGTCCGACATTGCGGGGAATTGTGATGCCTGAGAAAAAAACAGTGGACCG
. : . : . : . : . : . :
JMFS136H12+ GCGAGTGTGGTGGACAGTGGAG
JMFS137F03+ GCGAGTGTGGTGGACAGTGGAG
JMSF032N21+ GCGAGTGTGGTGGACAGTGGAGAAAAATAACCC
JMSF004P14+ GCGAGTGTGGTGGACAGTGGAGAAAAATAACCC
JMFF048E05+ GCGAGTGTGGTGGACAGTGGAGAAAAATAACCC
JMSF038O20+ ACTACCCGAAAGTGTGCACTGGATCGCTCCCTTGGAAGTCGAACTTGTAACCCAGTGGTT
____________________________________________________________
consensus GCGAGTGTGGTGGACAGTGGAGAAAAATAACCCGGAAGTCGAACTTGTAACCCAGTGGTT
. : . : . : . : . : . :
JMSF038O20+ ACCAAGTCAACAGCCTTACGAACTTCGTTGGGGTGGGGTGGGGCCCACAATAAACTGAGA
____________________________________________________________
consensus ACCAAGTCAACAGCCTTACGAACTTCGTTGGGGTGGGGTGGGGCCCACAATAAACTGAGA
. : . : . : . : . : . :
JMSF038O20+ AAAAAACAGTGGACCGGCGAGTGTGGTGGACAGTGGAGAAAAATAACCCAAAGACAGACC
____________________________________________________________
consensus AAAAAACAGTGGACCGGCGAGTGTGGTGGACAGTGGAGAAAAATAACCCAAAGACAGACC