| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN014H05 | Sequence | 596 | 010829 (7) | ref|XP_009791272.1| | 3e-55 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana sylvestris] | |||||
| JMFN041P21 | Sequence | 643 | 010829 (7) | ref|XP_009598879.1| | 4e-64 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi | |||||
| JMFN044P23 | Sequence | 634 | 010829 (7) | ref|XP_009598879.1| | 4e-64 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi | |||||
| JMFS152C12 | Sequence | 618 | 010829 (7) | ref|XP_009598879.1| | 3e-64 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi | |||||
| JMSF020F03 | Sequence | 693 | 010829 (7) | ref|XP_009598879.1| | 7e-64 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi | 652 | 010829 (7) | ref|XP_009598879.1| | 4e-64 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi |
| JMSF038N12 | Sequence | 641 | 010829 (7) | ref|XP_009598879.1| | 4e-64 | PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi | 845 | 005627 (9) | ref|XP_009801027.1| | 5e-156 | PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana sylvestris] r |
This contig is upended
. : . : . : . : . : . :
JMFN014H05+ AAATGTGTGAAGTGCAATACA
JMSF020F03+ GAAGTGCAATACA
____________________________________________________________
consensus AAATGTGTGAAGTGCAATACA
. : . : . : . : . : . :
JMFN044P23+ GAAG
JMFN014H05+ GCCATCAGTTTATTTCAACATAACACCAAAAATCTGGCAGATATCCAAGGATCAATGAAG
JMSF020F03+ GCCATCAGTTTATTTCAACATAACACCAAAAATCTGGCAGATATCCAAGGATCAATGAAG
rJMSF020F03- AAAATCTGGCAGATATCCAAGGATCAATGAAG
JMFN041P21+ CAGATATCCAAGGATCAATGAAG
____________________________________________________________
consensus GCCATCAGTTTATTTCAACATAACACCAAAAATCTGGCAGATATCCAAGGATCAATGAAG
. : . : . : . : . : . :
JMFN044P23+ TGAAACTGGTTATCTGGTATCC-TAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
JMFS152C12+ GTATCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
JMFN014H05+ TGAAACTGGTTATCTGGTATCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
JMSF020F03+ TGAAACTGGTTATCTGGTATCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
rJMSF020F03- TGAAACTGGTTATCTGGTATCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
JMFN041P21+ TGAAACTGGTTATCTGGTATCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
JMSF038N12+ TCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
____________________________________________________________
consensus TGAAACTGGTTATCTGGTATCCTTAAAAAAGGCAGAGTTTCCATGACTGGAATTATGTGA
. : . : . : . : . : . :
JMFN044P23+ ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
JMFS152C12+ ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
JMFN014H05+ ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
JMSF020F03+ ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
rJMSF020F03- ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
JMFN041P21+ ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
JMSF038N12+ ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
____________________________________________________________
consensus ATGTGGAATAGCCTCTGTAAATGCAGTGTAGTTCAAACATGCTCCAACAAGACCAACAAG
. : . : . : . : . : . :
JMFN044P23+ CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
JMFS152C12+ CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
JMFN014H05+ CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
JMSF020F03+ CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
rJMSF020F03- CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
JMFN041P21+ CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
JMSF038N12+ CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
____________________________________________________________
consensus CAATTAAAGTTTTCAACTAGAATAGGAATAAATAGGTTCCTCTAGCAACTCGACATTCCC
. : . : . : . : . : . :
JMFN044P23+ TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
JMFS152C12+ TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
JMFN014H05+ TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
JMSF020F03+ TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
rJMSF020F03- TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
JMFN041P21+ TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
JMSF038N12+ TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
____________________________________________________________
consensus TTATTTTGCCTGAGGGTGGGATGCAATAAAGTCCACAGCAAGATTGATTGAGTTGATCTT
. : . : . : . : . : . :
JMFN044P23+ GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
JMFS152C12+ GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
JMFN014H05+ GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
JMSF020F03+ GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
rJMSF020F03- GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
JMFN041P21+ GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
JMSF038N12+ GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
____________________________________________________________
consensus GTCTGCTTCATTGTCAGGAATCTCAAATCCAAACTCTTCTTCCAGGGCCATAACAATTTC
. : . : . : . : . : . :
JMFN044P23+ CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
JMFS152C12+ CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
JMFN014H05+ CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
JMSF020F03+ CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
rJMSF020F03- CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
JMFN041P21+ CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
JMSF038N12+ CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
____________________________________________________________
consensus CACGGCGTCCAGGCTATCTAAACCGAGATCACTTTGGAAATTAGCATTTGGGGTAACCTT
. : . : . : . : . : . :
JMFN044P23+ GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
JMFS152C12+ GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
JMFN014H05+ GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
JMSF020F03+ GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
rJMSF020F03- GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
JMFN041P21+ GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
JMSF038N12+ GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
____________________________________________________________
consensus GGCAGGATCCACTTTCTGGAAGTTTTTGACGATGTTGCAGACGCGATCGGTGACTTCCGA
. : . : . : . : . : . :
JMFN044P23+ CTTGTCGAGGAAGGAGCCTCTCACTTCCTC
JMFS152C12+ CTTGTCGAGGAAGGAGCCTCTCACTTCCTC
JMFN014H05+ CTTGTCGAGGAAGGAGCCTCTCACTTCCTCCGAGAAATGGCGCTTCTGTCTCAGCAGCTG
JMSF020F03+ CTTGTCGAGGAAGGAGCCTCTCACTTCCTCCGAGAAATGGCGCTTCTGTCTCAGCAGCTG
rJMSF020F03- CTTGTCGAGGAAGGAGCCTCTCACTTCCTCCGAGAAATGGCGCTTCTGTCTCAGCAGCTG
JMFN041P21+ CTTGTCGAGGAAGGAGCCTCTCACTTCCTCCGAGAAATGGCGCTTCTGTCTCAGCAGCTG
JMSF038N12+ CTTGTCGAGGAAGGAGCCTCTCACTTCCTCCGAGAAATGGCGCTTCTGTCTCAGCAGCTG
____________________________________________________________
consensus CTTGTCGAGGAAGGAGCCTCTCACTTCCTCCGAGAAATGGCGCTTCTGTCTCAGCAGCTG
. : . : . : . : . : . :
JMFN014H05+ AGTCAATGAGCCGCCACAGTTAGGGATTCGATTAG
JMSF020F03+ AGTCAATGAGCCGCCACAGTTAGGGATTCGATTAGGGTTTCGCAGTGCCACTGCTTCTAC
rJMSF020F03- AGTCAATGAGCCGCCACAGTTAGGGATTCGATTAGGGTTTCGCAGTGCCACTGCTTCTAC
JMFN041P21+ AGTCAATGAGCCGCCACAGTTAGGGATTCGATTAGGGTTTCGCAGTGCCACTGCTTCTAC
JMSF038N12+ AGTCAATGAGCCGCCACAGTTAGGGATTCGATTAGGGTTTCGCAGTGCCACTGCTTCTAC
____________________________________________________________
consensus AGTCAATGAGCCGCCACAGTTAGGGATTCGATTAGGGTTTCGCAGTGCCACTGCTTCTAC
. : . : . : . : . : . :
JMSF020F03+ TCTCAAGTACTTTAGCAGTGCGTTCCTCGCAGCCGCCGCCATCTACGAATGTAAACAGAT
rJMSF020F03- TCTCAAGTACTTTAGCAGTGCGTTCCTCGCAGCCGCCGCCATCTACGAATGTAAACAGAT
JMFN041P21+ TCTCAAGTACTTTAGCAGTGCGTTCCTCGCAGCCGCCGCCATCTACGAATGTAAACAGAT
JMSF038N12+ TCTCAAGTACTTTAGCAGTGCGTTCCTCGCAGCCGCCGCCATCTACGAATGTAAACAGAT
____________________________________________________________
consensus TCTCAAGTACTTTAGCAGTGCGTTCCTCGCAGCCGCCGCCATCTACGAATGTAAACAGAT
. : . : . : . : . : . :
JMSF020F03+ GAAGGGGGAGAAGGGTTCT
rJMSF020F03- GAAGGGGGAGAAGGGTTCT
JMFN041P21+ GAAGGGGGAGAAGGGTTCTG
JMSF038N12+ GAAGGGGGAGAAGGGTTCTGGGCTTTTGGAGGAACTGTGAAGGCTTTTCTGGTACAGATC
____________________________________________________________
consensus GAAGGGGGAGAAGGGTTCTGGGCTTTTGGAGGAACTGTGAAGGCTTTTCTGGTACAGATC