| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018N07 | Sequence | 603 | 010828 (11) | ref|XP_010645879.1| | 0.001 | PREDICTED: far upstream element-binding protein 1 isoform X1 [Vitis vinifera] | 733 | 011936 (9) | ref|XP_006573840.1| | 2e-16 | PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding protein 2-like [Gl |
| JMFF018P22 | Sequence | 615 | 010828 (11) | 656 | 011936 (9) | ref|XP_002277528.2| | 4e-18 | PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera] | |||
| JMFF043E22 | Sequence | 609 | 010828 (11) | ref|XP_002277528.2| | 9e-04 | PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera] | 583 | 011936 (9) | gb|KDP45615.1| | 5e-14 | hypothetical protein JCGZ_17222 [Jatropha curcas] |
| JMFS010H08 | Sequence | 567 | 010828 (11) | ref|XP_002277528.2| | 0.001 | PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera] | |||||
| JMFS090H05 | Sequence | 646 | 010828 (11) | ||||||||
| JMFS118H04 | Sequence | 608 | 010828 (11) | ref|XP_010645879.1| | 0.001 | PREDICTED: far upstream element-binding protein 1 isoform X1 [Vitis vinifera] | |||||
| JMFS148C04 | Sequence | 626 | 010828 (11) | ref|XP_008814298.1| | 2e-04 | hypothetical protein C922_00460 [Plasmodium inui San Antonio 1] gb|EUD68772.1| | |||||
| JMSF007D05 | Sequence | 311 | 010828 (11) | 683 | 011936 (9) | ref|XP_010645879.1| | 4e-18 | PREDICTED: far upstream element-binding protein 1 isoform X1 [Vitis vinifera] | |||
| JMSF011J02 | Sequence | 356 | 010828 (11) | ref|XP_006353593.1| | 5e-04 | PREDICTED: far upstream element-binding protein 2-like [Solanum tuberosum] | 749 | 011936 (9) | gb|KDP45615.1| | 4e-14 | hypothetical protein JCGZ_17222 [Jatropha curcas] |
| JMSF013B03 | Sequence | 236 | 010828 (11) | 794 | 011936 (9) | ref|XP_002277528.2| | 8e-24 | PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera] | |||
| JMSF038M11 | Sequence | 299 | 010828 (11) | 218 | 011936 (9) | ref|XP_007019886.1| | 4e-10 | KH domain-containing protein, putative isoform 1 [Theobroma cacao] gb|EOY17111.1 | |||
This contig is upended
. : . : . : . : . : . :
JMFS148C04+ GATATCAGTAGTAGATGGTTCCTGAT
____________________________________________________________
consensus GATATCAGTAGTAGATGGTTCCTGAT
. : . : . : . : . : . :
JMFS148C04+ CTTCACCTTTAGATGGTTCTTCTGGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
JMFS118H04+ GGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
JMFF018N07+ GGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
JMFS010H08+ GCAAAT
JMFS090H05+ GGAACATTGTCAGTCTGAGGTTTCTCTGTNTGCAAAT
JMFF018P22+ TTTCTCTGTTTGCAAAT
____________________________________________________________
consensus CTTCACCTTTAGATGGTTCTTCTGGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
. : . : . : . : . : . :
JMFS148C04+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFS118H04+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFF018N07+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFS010H08+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFS090H05+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFF043E22+ GTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTGNCA
JMFF018P22+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
____________________________________________________________
consensus CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
. : . : . : . : . : . :
JMFS148C04+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFS118H04+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFF018N07+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFS010H08+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFS090H05+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFF043E22+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFF018P22+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
____________________________________________________________
consensus AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
. : . : . : . : . : . :
JMFS148C04+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFS118H04+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFF018N07+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFS010H08+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFS090H05+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFF043E22+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFF018P22+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
____________________________________________________________
consensus CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
. : . : . : . : . : . :
JMFS148C04+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFS118H04+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFF018N07+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFS010H08+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMSF011J02+ TCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFS090H05+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFF043E22+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFF018P22+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
____________________________________________________________
consensus CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
. : . : . : . : . : . :
JMFS148C04+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFS118H04+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFF018N07+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMSF007D05+ TCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFS010H08+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMSF011J02+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFS090H05+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFF043E22+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFF018P22+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
____________________________________________________________
consensus CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
. : . : . : . : . : . :
JMFS148C04+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFS118H04+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFF018N07+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMSF007D05+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFS010H08+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMSF011J02+ CACCTTCACCGCCCTCCAACTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFS090H05+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFF043E22+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACTGAATCTGGCTCGGCCT
JMFF018P22+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMSF038M11+ TTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACNGAATCTGGCTCGGCCT
____________________________________________________________
consensus CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
. : . : . : . : . : . :
JMFS148C04+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFS118H04+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFF018N07+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF007D05+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFS010H08+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF011J02+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFS090H05+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFF043E22+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF013B03+ CTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFF018P22+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF038M11+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGANTGCTCCAAATCCTCAAGNTTCCGTN
____________________________________________________________
consensus CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
. : . : . : . : . : . :
JMFS148C04+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFS118H04+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFF018N07+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF007D05+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFS010H08+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF011J02+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFS090H05+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFF043E22+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF013B03+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFF018P22+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF038M11+ TGAGACTATCGGAGTTCGCCACCGATGTCGNTGCCACCACTACCTCCTCATCCGCCATTG
____________________________________________________________
consensus TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
. : . : . : . : . : . :
JMFS148C04+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFS118H04+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFF018N07+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF007D05+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFS010H08+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF011J02+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFS090H05+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFF043E22+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF013B03+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFF018P22+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF038M11+ NGATCCGGACGTTCCTGAAAACCNTAACGAAAGCGGTGCAAGCGTGTAAAAGAGAGGCCT
____________________________________________________________
consensus CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
. : . : . : . : . : . :
JMFS148C04+ T
JMFS118H04+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGA
JMFF018N07+ TTCTAGGAGAGTGTGAGATTGCGAGA
JMSF007D05+ TTCTAGGAGAGTGTGAGAT
JMFS010H08+ TTCTAGGAGAGTGTGAGATTGT
JMSF011J02+ TTCTAGGAGAGTGTGAGATTGT
JMFS090H05+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGG
JMFF043E22+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATT
JMSF013B03+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATT
JMFF018P22+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATT
JMSF038M11+ TTNTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATTTGTATC
____________________________________________________________
consensus TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATTTGTATC