Contig 010828:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018N07Sequence603010828 (11)ref|XP_010645879.1|0.001PREDICTED: far upstream element-binding protein 1 isoform X1 [Vitis vinifera]733011936 (9)ref|XP_006573840.1|2e-16PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding protein 2-like [Gl
JMFF018P22Sequence615010828 (11)656011936 (9)ref|XP_002277528.2|4e-18PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera]
JMFF043E22Sequence609010828 (11)ref|XP_002277528.2|9e-04PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera]583011936 (9)gb|KDP45615.1|5e-14hypothetical protein JCGZ_17222 [Jatropha curcas]
JMFS010H08Sequence567010828 (11)ref|XP_002277528.2|0.001PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera]
JMFS090H05Sequence646010828 (11)
JMFS118H04Sequence608010828 (11)ref|XP_010645879.1|0.001PREDICTED: far upstream element-binding protein 1 isoform X1 [Vitis vinifera]
JMFS148C04Sequence626010828 (11)ref|XP_008814298.1|2e-04hypothetical protein C922_00460 [Plasmodium inui San Antonio 1] gb|EUD68772.1|
JMSF007D05Sequence311010828 (11)683011936 (9)ref|XP_010645879.1|4e-18PREDICTED: far upstream element-binding protein 1 isoform X1 [Vitis vinifera]
JMSF011J02Sequence356010828 (11)ref|XP_006353593.1|5e-04PREDICTED: far upstream element-binding protein 2-like [Solanum tuberosum]749011936 (9)gb|KDP45615.1|4e-14hypothetical protein JCGZ_17222 [Jatropha curcas]
JMSF013B03Sequence236010828 (11)794011936 (9)ref|XP_002277528.2|8e-24PREDICTED: far upstream element-binding protein 1 isoform X2 [Vitis vinifera]
JMSF038M11Sequence299010828 (11)218011936 (9)ref|XP_007019886.1|4e-10KH domain-containing protein, putative isoform 1 [Theobroma cacao] gb|EOY17111.1

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS148C04+ GATATCAGTAGTAGATGGTTCCTGAT
                      ____________________________________________________________
consensus GATATCAGTAGTAGATGGTTCCTGAT
 
. : . : . : . : . : . :
JMFS148C04+ CTTCACCTTTAGATGGTTCTTCTGGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
JMFS118H04+ GGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
JMFF018N07+ GGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
JMFS010H08+ GCAAAT
JMFS090H05+ GGAACATTGTCAGTCTGAGGTTTCTCTGTNTGCAAAT
JMFF018P22+ TTTCTCTGTTTGCAAAT
                      ____________________________________________________________
consensus CTTCACCTTTAGATGGTTCTTCTGGAACATTGTCAGTCTGAGGTTTCTCTGTTTGCAAAT
 
. : . : . : . : . : . :
JMFS148C04+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFS118H04+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFF018N07+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFS010H08+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFS090H05+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
JMFF043E22+ GTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTGNCA
JMFF018P22+ CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
                      ____________________________________________________________
consensus CATCAATTGGAGCAGGTGGTTCTTCTGGAACATTTTCAGTCTGAGGTTTCTCTGTTTGCA
 
. : . : . : . : . : . :
JMFS148C04+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFS118H04+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFF018N07+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFS010H08+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFS090H05+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFF043E22+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
JMFF018P22+ AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
                      ____________________________________________________________
consensus AATCATCAATTGGAGCAGGTTGTTCACTGATGGTGGTCTTGGGAGCATCATTCTCCACTC
 
. : . : . : . : . : . :
JMFS148C04+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFS118H04+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFF018N07+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFS010H08+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFS090H05+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFF043E22+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
JMFF018P22+ CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
                      ____________________________________________________________
consensus CTTGGCCATTATCCAACTGTTCATTATTATCCAAACCATCTGGCTTCTCTTCAGTATCAT
 
. : . : . : . : . : . :
JMFS148C04+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFS118H04+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFF018N07+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFS010H08+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMSF011J02+ TCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFS090H05+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFF043E22+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
JMFF018P22+ CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
                      ____________________________________________________________
consensus CCTCTTTTGACTCATCCCCATTCTTCTCCTCTGTATGTCCATTCTCAGCACCTAATTCAT
 
. : . : . : . : . : . :
JMFS148C04+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFS118H04+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFF018N07+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMSF007D05+ TCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFS010H08+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMSF011J02+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFS090H05+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFF043E22+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
JMFF018P22+ CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
                      ____________________________________________________________
consensus CGGTTTTCTCCTCAAGACGAGGTCGTTTAGCTTCAGACCCATCAGCTTGAGCTTCATCTT
 
. : . : . : . : . : . :
JMFS148C04+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFS118H04+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFF018N07+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMSF007D05+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFS010H08+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMSF011J02+ CACCTTCACCGCCCTCCAACTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFS090H05+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMFF043E22+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACTGAATCTGGCTCGGCCT
JMFF018P22+ CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
JMSF038M11+ TTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACNGAATCTGGCTCGGCCT
                      ____________________________________________________________
consensus CACCTTCACCGCCCTCCACCTCTTCCTCGTCGGCTTTATTGACCGAATCTGGCTCGGCCT
 
. : . : . : . : . : . :
JMFS148C04+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFS118H04+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFF018N07+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF007D05+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFS010H08+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF011J02+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFS090H05+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFF043E22+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF013B03+ CTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMFF018P22+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
JMSF038M11+ CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGANTGCTCCAAATCCTCAAGNTTCCGTN
                      ____________________________________________________________
consensus CCTCCTTCTTCAATAGCGACTCACCTGGAGCGGATTGCTCCAAATCCTCAAGCTTCCGTT
 
. : . : . : . : . : . :
JMFS148C04+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFS118H04+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFF018N07+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF007D05+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFS010H08+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF011J02+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFS090H05+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFF043E22+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF013B03+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMFF018P22+ TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
JMSF038M11+ TGAGACTATCGGAGTTCGCCACCGATGTCGNTGCCACCACTACCTCCTCATCCGCCATTG
                      ____________________________________________________________
consensus TGAGACTATCGGAGTTCGCCACCGATGTCGCTGCCACCACTACCTCCTCATCCGCCATTG
 
. : . : . : . : . : . :
JMFS148C04+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFS118H04+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFF018N07+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF007D05+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFS010H08+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF011J02+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFS090H05+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFF043E22+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF013B03+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMFF018P22+ CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
JMSF038M11+ NGATCCGGACGTTCCTGAAAACCNTAACGAAAGCGGTGCAAGCGTGTAAAAGAGAGGCCT
                      ____________________________________________________________
consensus CGATCCGGACGTTCCTGAAAACCCTAACGAAAGCGGTGCAA-CGTGTAAAAGAGAGGCCT
 
. : . : . : . : . : . :
JMFS148C04+ T
JMFS118H04+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGA
JMFF018N07+ TTCTAGGAGAGTGTGAGATTGCGAGA
JMSF007D05+ TTCTAGGAGAGTGTGAGAT
JMFS010H08+ TTCTAGGAGAGTGTGAGATTGT
JMSF011J02+ TTCTAGGAGAGTGTGAGATTGT
JMFS090H05+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGG
JMFF043E22+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATT
JMSF013B03+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATT
JMFF018P22+ TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATT
JMSF038M11+ TTNTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATTTGTATC
                      ____________________________________________________________
consensus TTCTAGGAGAGTGTGAGATTGTGAGAAGCGAGAATCGGGAAACACGATTGTATTTGTATC