clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF008N19 | Sequence | 300 | 010825 (8) | gb|EYU36730.1| | 3e-35 | hypothetical protein MIMGU_mgv1a009015mg [Erythranthe guttata] | 794 | 010825 (8) | ref|XP_011073896.1| | 5e-100 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Sesamum ind |
JMSF038E08 | Sequence | 685 | 010825 (8) | ref|XP_004233240.1| | 3e-118 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Solanum lyc | 905 | 010825 (8) | ref|XP_010045288.1| | 2e-126 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Eucalyptus |
JMSF046F01 | Sequence | 687 | 010825 (8) | ref|XP_004233240.1| | 5e-124 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Solanum lyc | 766 | 010825 (8) | ref|XP_010045288.1| | 4e-124 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Eucalyptus |
JMSF051F16 | Sequence | 691 | 010825 (8) | ref|XP_004233240.1| | 8e-125 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Solanum lyc | 747 | 010825 (8) | ref|XP_010045288.1| | 6e-126 | PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Eucalyptus |
This contig is upended
. : . : . : . : . : . :
rJMSF038E08- ATTTCC
____________________________________________________________
consensus ATTTCC
. : . : . : . : . : . :
rJMSF046F01- AATCTTTGTTATCAATATAATCTCAAAAAGTATGAAATTAGAATACA
rJMSF008N19- AAAAGTATGAAATTAGAATACA
rJMSF051F16- AAAAGTATGAAATTAGAATACA
rJMSF038E08- CTGCAATTACTACAATCTTTGTTATCAATATAATCTCAAAAAGTATGAAATTAGAATACA
____________________________________________________________
consensus CTGCAATTACTACAATCTTTGTTATCAATATAATCTCAAAAAGTATGAAATTAGAATACA
. : . : . : . : . : . :
rJMSF046F01- AATGCACATTATAAACTAATCATAACGTAAAAATTCGAGAATTTAAACCTCTGTTTCATA
rJMSF008N19- AATGCACATTATAAACTAATCATAACGTAAAAATTCGAGAATTTAAACCTCTGTTTCATA
rJMSF051F16- AATGCACATTATAAACTAATCATAACGTAAAAATTCGAGAATTTAAACCTCTGTTTCATA
rJMSF038E08- AATGCACATTATAAACTAATCATAACGTAAAAATTCGAGAATTTAAACCTCTGTTTCATA
____________________________________________________________
consensus AATGCACATTATAAACTAATCATAACGTAAAAATTCGAGAATTTAAACCTCTGTTTCATA
. : . : . : . : . : . :
rJMSF046F01- TCAAGCAATTACAGACAAAGAAAATAGTGAGAACCTTGAACTCCAAATGCCTGGTTAAAT
rJMSF008N19- TCAAGCAATTACAGACAAAGAAAATAGTGAGAACCTTGAACTCCAAATGCCTGGTTAAAT
rJMSF051F16- TCAAGCAATTACAGACAAAGAAAATAGTGAGAACCTTGAACTCCAAATGCCTGGTTAAAT
rJMSF038E08- TCAAGCAATTACAGACAAAGAAAATAGTGAGAACCTTGAACTCCAAATGCCTGGTTAAAT
____________________________________________________________
consensus TCAAGCAATTACAGACAAAGAAAATAGTGAGAACCTTGAACTCCAAATGCCTGGTTAAAT
. : . : . : . : . : . :
rJMSF046F01- GCTAACCTCGGTAGTATTGCTGGTATTGGTTGATTCCTTCTCCCTCCAAATTGCCAGCAC
rJMSF008N19- GCTAACCTCGGTAGTATTGCTGGTATTGGTTGATTCCTTCTCCCTCCAAATTGCCAGCAC
rJMSF051F16- GCTAACCTCGGTAGTATTGCTGGTATTGGTTGATTCCTTCTCCCTCCAAATTGCCAGCAC
rJMSF038E08- GCTAACCTCGGTAGTATTGCTGGTATTGGTTGATTCCTTCTCCCTCCAAATTGCCAGCAC
____________________________________________________________
consensus GCTAACCTCGGTAGTATTGCTGGTATTGGTTGATTCCTTCTCCCTCCAAATTGCCAGCAC
. : . : . : . : . : . :
rJMSF046F01- TTCATCTGTTCTGAATCTCTGCGTGAATGTGGATTCCTCCATTGCAGTCGAAGCTCCATG
rJMSF008N19- TTCATCTGTTCTGAATCTCTGCGTGAATGTGGATTCCTCCATTGCAGTCGAAGCTCCATG
rJMSF051F16- TTCATCTGTTCTGAATCTCTGCGTGAATGTGGATTCCTCCATTGCAGTCGAAGCTCCATG
rJMSF038E08- TTCATCTGTTCTGAATCTCTGCGTGAATGTGGATTCCTCCATTGCAGTCGAAGCTCCATG
____________________________________________________________
consensus TTCATCTGTTCTGAATCTCTGCGTGAATGTGGATTCCTCCATTGCAGTCGAAGCTCCATG
. : . : . : . : . : . :
rJMSF046F01- AGCATAGGCTAGGAGACCGGTATATGCAATCATCGCTCCATTGTCAATGCAGTACCTGTC
rJMSF008N19- AGCATAGGCTAGGAGACCGGTATATGCAATCATCGCTCCATTGTCAATGCAGTACCTGTC
rJMSF051F16- AGCATAGGCTAGGAGACCGGTATATGCAATCATCGCTCCATTGTCAATGCAGTACCTGTC
rJMSF038E08- AGCATAGGCTAGGAGACCGGTATATGCAATCATCGCTCCATTGTCAATGCAGTACCTGTC
____________________________________________________________
consensus AGCATAGGCTAGGAGACCGGTATATGCAATCATCGCTCCATTGTCAATGCAGTACCTGTC
. : . : . : . : . : . :
rJMSF046F01- GTCAGTTGCATACAATTTGCCACCCCTCTCGGAGCACATAATTCTCATCATCTCTTGCAA
rJMSF008N19- GTCAGTTGCAT--AATTTGCCACCCCTCTCGGAGCACATAATTCTCATCATCTCTTGCAA
rJMSF051F16- GTCAGTTGCATACAATTTGCCACCCCTCTCGGAGCACATAATTCTCATCATCTCTTGCAA
rJMSF038E08- GTCAGTTGCATACAATTTGCCACCCCTCTCGGAGCACATAATTCTCATCATCTCTTGCAA
____________________________________________________________
consensus GTCAGTTGCATACAATTTGCCACCCCTCTCGGAGCACATAATTCTCATCATCTCTTGCAA
. : . : . : . : . : . :
rJMSF046F01- TCGCTCGTTGCATCCCACACCGCCAACAATCAATACGTCTTTCTTGTCACAATGTGCCAT
rJMSF008N19- TCGCTCGTTGCATCCCACACCGCCAACAATCAATACGTCTTTCTTGTCACAATGTGCCAT
rJMSF051F16- TCGCTCGTTGCATCCCACACCGCCAACAATCAATACGTCTTTCTTGTCACAATGTGCCAT
rJMSF038E08- TCGCTCGTTGCATCCCACACCGCCAACAATCAATACGTCTTTCTTGTCACAATGTGCCAT
____________________________________________________________
consensus TCGCTCGTTGCATCCCACACCGCCAACAATCAATACGTCTTTCTTGTCACAATGTGCCAT
. : . : . : . : . : . :
rJMSF046F01- GGCCCGCTCAGTGATCTCCACAAGCATTGCAAATAAAGTTTCCTGTAAGGAGTAGCAAAG
rJMSF008N19- GGCCCGCTCAGTGATCTCCACAAGCATTGCAAATAAAGTTTCCTGTAAGGAGTAGCAAAG
rJMSF051F16- GGCCCGCTCAGTGATCTCCACAAGCATTGCAAATAAAGTTTCCTGTAAGGAGTAGCAAAG
rJMSF038E08- GGCCCGCTCAGTGATCTCCACAAGCATTGCAAATAAAGTTTCCTGTAAGGAGTAGCAAAG
____________________________________________________________
consensus GGCCCGCTCAGTGATCTCCACAAGCATTGCAAATAAAGTTTCCTGTAAGGAGTAGCAAAG
. : . : . : . : . : . :
rJMSF046F01- ATCTGCAGGGGAGCACTCATTATTTTTTAGCATCTCTTCAGTGGTGGCTTCAATATAGCT
rJMSF008N19- ATCTGCAGGGGAGCACTCATTATTTTTTAGCATCTCTTCAGTGGTGGCTTCAATATAGCT
rJMSF051F16- ATCTGCAGGGGAGCACTCATTATTTTTTAGCATCTCTTCAGTGGTGGCTTCAATATAGCT
rJMSF038E08- ATCTGCAGGGGAGCACTCATTATTTTTTAGCATCTCTTCAGTGGTGGCTTCAATATAGCT
____________________________________________________________
consensus ATCTGCAGGGGAGCACTCATTATTTTTTAGCATCTCTTCAGTGGTGGCTTCAATATAGCT
. : . : . : . : . : . :
rJMSF046F01- TAAGATCCCACTAAATGAAACATCCATCCCTTTTACTACATATGGAAGTTCAATGAACTT
rJMSF008N19- TAAGATCCCACTAAATGAAACATCCATCCCTTTTACTACATATGGAAGTTCAATGAACTT
rJMSF051F16- TAAGATCCCACTAAATGAAACATCCATCCCTTTTACTACATATGGAAGTTCAATGAACTT
rJMSF038E08- TAAGATCCCACTAAATGAAACATCCATCCCTTTTACTACATATGGAAGTTCAATGAACTT
____________________________________________________________
consensus TAAGATCCCACTAAATGAAACATCCATCCCTTTTACTACATATGGAAGTTCAATGAACTT
. : . : . : . : . : . :
rJMSF046F01- TTCTCCTTTCTTTGCAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACCATGT
rJMSF008N19- TTCTCCTTTCTTTGCAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACAATGT
rJMSF051F16- TTCTCCTTTCTTTGCAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACAATGT
rJMSF038E08- TTCTCCTTTCTTTGCAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACAATGT
JMSF046F01+ CAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACAATGT
JMSF051F16+ TTGCAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACAATGT
JMSF038E08+ CCAGGGCTTGGATCGTTGGACAATGT
____________________________________________________________
consensus TTCTCCTTTCTTTGCAAGCTGTTCAATGTTGTATCCAGGGCTTGGATCGTTGGACAATGT
. : . : . : . : . : . :
rJMSF046F01- GAGAACCCTAGCAAACCGGTCCANGCAATTCCCAACAGCGATATCAATGGTCTCCCCGA
rJMSF008N19- GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCG-A
rJMSF051F16- GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCG
rJMSF038E08- GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCGAA
JMSF046F01+ GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCG-A
JMSF051F16+ GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCG-A
JMSF038E08+ GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCG-A
____________________________________________________________
consensus GAGAACCCTAGCAAACCGGTCCAAGCAATTCCCAACAGCGATATCAATGGTCTCCCCG-A
. : . : . : . : . : . :
rJMSF008N19- AAATTCGGTACCTCCCTTCGCTATAAGCTATGACCTGAGTATTCCCTCCG
rJMSF038E08- AAATTCGGTACCTCCCTTCGCTATAAGCTATGACCTGAGTATTCCCTCCGCTGACGTACA
JMSF046F01+ AAATTCGGTACCTCCCTTCGCTATAAGCTATGACCTGAGTATTCCCTCCGCTGACGTACA
JMSF051F16+ AAATTCGGTACCTCCCTTCGCTATAAGCTATGACCTGAGTATTCCCTCCGCTGACGTACA
JMSF038E08+ AAATTCGGTACCTCCCTTCGCTATAAGCTATGACCTGAGTATTCCCTCCGCTGACGTACA
____________________________________________________________
consensus AAATTCGGTACCTCCCTTCGCTATAAGCTATGACCTGAGTATTCCCTCCGCTGACGTACA
. : . : . : . : . : . :
rJMSF038E08- ACACAACCGGGTCAACCGCGCCGGTCACGACCCGGCCCATCTCAATATGCGCGACGCAA
JMSF046F01+ ACACAACCGGGTCAACCGCGCCGGTCACGACCCGGCCCATCTCAATATGCGCGACGCAAT
JMSF051F16+ ACACAACCGGGTCAACCGCGCCGGTCACGACCCGGCCCATCTCAATATGCGCGACGCAAT
JMSF038E08+ ACACAACCGGGTCAACCGCGCCGGTCACGACCCGGCCCATCTCAATATGCGCGACGCAAT
____________________________________________________________
consensus ACACAACCGGGTCAACCGCGCCGGTCACGACCCGGCCCATCTCAATATGCGCGACGCAAT
. : . : . : . : . : . :
JMSF046F01+ GATTCACCGCGACGATTGGCTTCTTCCAGAGCTGGGAGAGGACGCGGACGACCACCGCGG
JMSF051F16+ GATTCACCGCGACGATTGGCTTCTTCCAGAGCTGGGAGAGGACGCGGACGACCACCGCGG
JMSF038E08+ GATTCACCGCGACGATTGGCTTCTTCCAGAGCTGGGAGAGGACGCGGACGACCACCGCGG
____________________________________________________________
consensus GATTCACCGCGACGATTGGCTTCTTCCAGAGCTGGGAGAGGACGCGGACGACCACCGCGG
. : . : . : . : . : . :
JMSF046F01+ AGACCTGTAAGGGCGCGCCCATGCCGGGGCCCTTGGTGTAGCAAAGGCAGTCGATGTCCT
JMSF051F16+ AGACCTGTAAGGGCGCGCCCATGCCGGGGCCCTTGGTGTAGCAAAGGCAGTCGATGTCCT
JMSF038E08+ AGACCTGTAAGGGCGCGCCCATGCCGGGGCCCTTGGTGTAGCAAAGGCAGTCGATGTCCT
____________________________________________________________
consensus AGACCTGTAAGGGCGCGCCCATGCCGGGGCCCTTGGTGTAGCAAAGGCAGTCGATGTCCT
. : . : . : . : . : . :
JMSF046F01+ TCGGGGTTACTCCGGCGGCGTCTAAGGCGGATTTGATGAGAGGGAGGACGTGCTGGAGGT
JMSF008N19+ CGTCTAAGGCGGATTTGATGAGAGGGAGGACGTGCTGGAGGT
JMSF051F16+ TCGGGGTTACTCCGGCGGCGTCTAAGGCGGATTTGATGAGAGGGAGGACGTGCTGGAGGT
JMSF038E08+ TCGGGGTTACTCCGGCGGCGTCTAAGGCGGATTTGATGAGAGGGAGGACGTGCTGGAGGT
____________________________________________________________
consensus TCGGGGTTACTCCGGCGGCGTCTAAGGCGGATTTGATGAGAGGGAGGACGTGCTGGAGGT
. : . : . : . : . : . :
JMSF046F01+ GGTGCTGGGCGGTTTCGCGGGGGAGGAAGCCCTGCCCCGGCGGAGTGATGTAAGTGTGGC
JMSF008N19+ GGTGCTGGGCGGTTTCGCGGGGGAGGAAGCCCTGCCCCGGCGGAGTGATGTAAGTGTGGC
JMSF051F16+ GGTGCTGGGCGGTTTCGCGGGGGAGGAAGCCCTGCCCCGGCGGAGTGATGTAAGTGTGGC
JMSF038E08+ GGTGCTGGGCGGTTTCGCGGGGGAGGAAGCCCTGCCCCGGCGGAGTGATGTAAGTGTGGC
____________________________________________________________
consensus GGTGCTGGGCGGTTTCGCGGGGGAGGAAGCCCTGCCCCGGCGGAGTGATGTAAGTGTGGC
. : . : . : . : . : . :
JMSF046F01+ GGGGGTTGGATAGGATTGAGCCGTCGAGCGCCACCACTCCGACGCCGATTTTATTGGCGG
JMSF008N19+ GGGGGTTGGATAGGATTGAGCCGTCGAGCGCCACCACTCCGACGCCGATTTTATTGGCGG
JMSF051F16+ GGGGGTTGGATAGGATTGAGCCGTCGAGCGCCACCACTCCGACGCCGATTTTATTGGCGG
JMSF038E08+ GGGGGTTGGATAGGATTGAGCCGTCGAGCGCCACCACTCCGACGCCGATTTTATTGGCGG
____________________________________________________________
consensus GGGGGTTGGATAGGATTGAGCCGTCGAGCGCCACCACTCCGACGCCGATTTTATTGGCGG
. : . : . : . : . : . :
JMSF046F01+ AGCCCTCGAAACCTAGGGCTATTAGCTTCTTCTCCTCCTTCATTTTCGGATAATTGTCAG
JMSF008N19+ AGCCCTCGAAACCTAGGGCTATTAGCTTCTTCTCCTCCTTCATTTTCGGATAATTGTCAG
JMSF051F16+ AGCCCTCGAAACCTAGGGCTATTAGCTTCTTCTCCTCCTTCATTTTCGGATAATTGTCAG
JMSF038E08+ AGCCCTCGAAACCTAGGGCTATTAGCTTCTTCTCCTCCTTCATTTTCGGATAATTGTCAG
____________________________________________________________
consensus AGCCCTCGAAACCTAGGGCTATTAGCTTCTTCTCCTCCTTCATTTTCGGATAATTGTCAG
. : . : . : . : . : . :
JMSF046F01+ ACTGTCAGTGAACGCGCCGCCGGAAAGCCTGAGATTTTAGCCGTAGGGGTTTTAGAACGT
JMSF008N19+ ACTGTCAGTGAACGCGCCGCCGGAAAGCCTGAGATTTTAGCCGTAGGGGTTTTAGAACGT
JMSF051F16+ ACTGTCAGTGAACGCGCCGCCGGAAAGCCTGAGATTTTAGCCGTAGGGGTTTTAGAACGT
JMSF038E08+ ACTGTCAGTGAACGCGCCGCCGGAAAGCCTGAGATTTTAGCCGTAGGGGTTTTAGAACGT
____________________________________________________________
consensus ACTGTCAGTGAACGCGCCGCCGGAAAGCCTGAGATTTTAGCCGTAGGGGTTTTAGAACGT
. : . : . : . : . : . :
JMSF046F01+ GAGCGAGAAATATCCTCAAATAAGGGAAATAACGCTGTTCC
JMSF008N19+ GAGCGAGAAATATCCTC
JMSF051F16+ GAGCGAGAAATATCCTCAAATAAGGGAAATAACGCTGTTCC
JMSF038E08+ GAGCGAGAAATATCCTCAAATAAGGGAAATAACGCTGTTCCTATCTTTTTGGCACCAATC
____________________________________________________________
consensus GAGCGAGAAATATCCTCAAATAAGGGAAATAACGCTGTTCCTATCTTTTTGGCACCAATC