Contig 010820:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF047L02+                                                   CCAGAAATGGAAAGGGACTG
JMSF037D02+                                                                GGGACTG
                      ____________________________________________________________
consensus                                                     CCAGAAATGGAAAGGGACTG
 
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JMSF047L02+           GAAGGGTGCAAGAAACTCGGGATTTCATCGTACTTCAACAATGGCATGCACGGCAACTGA
JMSF037D02+           GAAGGGTGCAAGAAACTCGGGATTTCATCGTACTTCAACAATGGCATGCACGGCAACTGA
                      ____________________________________________________________
consensus             GAAGGGTGCAAGAAACTCGGGATTTCATCGTACTTCAACAATGGCATGCACGGCAACTGA
 
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JMSF047L02+           ACATCACTTTCCGGCTCCGATTCCGACGGGAACGGAACTGATTTATTATAGTAATGGTAA
JMSF037D02+           ACATCACTTTCCGGCTCCGATTCCGACGGGAACGGAACTGATTTATTATAGTAATGGTAA
                      ____________________________________________________________
consensus             ACATCACTTTCCGGCTCCGATTCCGACGGGAACGGAACTGATTTATTATAGTAATGGTAA
 
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JMSF047L02+           TAGCAAGAAAAGGAAGCGCAAGATTGAACCCAAAGCACGGCGTTTGGAATCCCCAGGCTC
JMSF037D02+           TAGCAAGAAAAGGAAGCGCAAGATTGAACCCAAAGCACGGCGTTTGGAATCCCCAGGCTC
                      ____________________________________________________________
consensus             TAGCAAGAAAAGGAAGCGCAAGATTGAACCCAAAGCACGGCGTTTGGAATCCCCAGGCTC
 
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JMSF047L02+           TCCGCCACGTCGGAAACCCAAGGAATGAACGGATTATGGATCAAACAGCAAACCGGCCGG
JMSF037D02+           TCCGCCACGTCGGAAACCCAAGGAATGAACGGATTATGGATCAAACAGCAAACCGGCCGG
                      ____________________________________________________________
consensus             TCCGCCACGTCGGAAACCCAAGGAATGAACGGATTATGGATCAAACAGCAAACCGGCCGG
 
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JMSF047L02+           CCTTGCTTTTCATATTCCTTCACCATCTCCGCCACTTTCCGGGAGCCAACCAGCTGGAGA
JMSF037D02+           CCTTGCTTTTCATATTCCTTCACCATCTCCGCCACTTTCCGGGAGCCAACCAGCTGGAGA
                      ____________________________________________________________
consensus             CCTTGCTTTTCATATTCCTTCACCATCTCCGCCACTTTCCGGGAGCCAACCAGCTGGAGA
 
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JMSF047L02+           TGATCGATGTAAAAGTCGACGTCGTCGCCGTTCTCGGAGTGCGGGAACTCGTCGTCGAAG
JMSF037D02+           TGATCGATGTAAAAGTCGACGTCGTCGCCGTTCTCGGAGTGCGGGAACTCGTCGTCGAAG
                      ____________________________________________________________
consensus             TGATCGATGTAAAAGTCGACGTCGTCGCCGTTCTCGGAGTGCGGGAACTCGTCGTCGAAG
 
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JMSF047L02+           AACTCGAACCTTATCATGCCGTCGCCGTACGGCGTGGGTTCGCCGGAGATGTTGCTGTTG
JMSF037D02+           AACTCGAACCTTATCATGCAGTCGCCGTACGGCGTGGGTTCGCCGGAGATGTTGCTGTTG
                      ____________________________________________________________
consensus             AACTCGAACCTTATCATGCCGTCGCCGTACGGCGTGGGTTCGCCGGAGATGTTGCTGTTG
 
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JMSF047L02+           GCTTTTCTCATGTCTCTCCCCACCGTTTCCGGCGCCGAGAAGGTGACGAGGAGGCCCTTG
JMSF037D02+           GCTTTTCTCATGTCTCTCCCCACCGTTTCCGGCGCCGAGAAGGTGACGAGGAGGCCCTTG
                      ____________________________________________________________
consensus             GCTTTTCTCATGTCTCTCCCCACCGTTTCCGGCGCCGAGAAGGTGACGAGGAGGCCCTTG
 
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JMSF047L02+           CTGGCCAGCCGCTTTCCCAGCCTGAGCAGCGGGTTCACGTGGCCCTGCCCGGGAAACGAG
JMSF037D02+           CTGGCCAGCCGCTTTCCCAGCCTGAGCAGCGGGTTCACGTGGCCCTGCCCGGGAAACGAG
                      ____________________________________________________________
consensus             CTGGCCAGCCGCTTTCCCAGCCTGAGCAGCGGGTTCACGTGGCCCTGCCCGGGAAACGAG
 
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JMSF047L02+           ATGAGTAAGGCGTGAGGGAGAGACGGTCCGGCGATTTCTTTAGAGCCCATTTTCGTCGAC
JMSF037D02+           ATGAGTAAGGCGTGAGGGAGAGACGGTCCGGCGATTTCTTTAGAGCCCATTTTCGTCGAC
                      ____________________________________________________________
consensus             ATGAGTAAGGCGTGAGGGAGAGACGGTCCGGCGATTTCTTTAGAGCCCATTTTCGTCGAC
 
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JMSF047L02+           GACGGGGAATGCGGCGGCTTATGGCGACGGACGGAGCTCTTGAGGGGTGGTAG       
JMSF037D02+           GACGGGGAATGCGGCGGCTTATGGCGACGGACGGAGCTCTTGAGGGGTGGTAGTGGACCC
                      ____________________________________________________________
consensus             GACGGGGAATGCGGCGGCTTATGGCGACGGACGGAGCTCTTGAGGGGTGGTAGTGGACCC