Contig 010810:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035P21Sequence288010810 (3)699014113 (4)gb|EYU26380.1|5e-06hypothetical protein MIMGU_mgv1a001366mg [Erythranthe guttata]
JMSF036G10Sequence269010810 (3)174014113 (4)
JMSF047I16Sequence180010810 (3)736014113 (4)ref|XP_009625384.1|2e-15PREDICTED: protein SPA1-RELATED 3 isoform X3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF036G10+                                             GAGAGAGAGAGAGAGAGAGAGAGAGA
JMSF047I16+                                             GAGAGAGAGAGAGAGAGAGAGAGAGA
JMSF035P21+                       GANACACANATATNTCTANAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
                      ____________________________________________________________
consensus                         GANACACANATATNTCTANAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
 
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JMSF036G10+           GAGAGAGAGAGGGGTATACTATACCATTTATCACTATATNTCTCACCCAGTAGAAGGAAA
JMSF047I16+           GAGAGAGAGAGGGGTATACTATACCATTTATCACTATATCTCTCACCCAGTAGAAGGAAA
JMSF035P21+           GAGAGAGAGAGGGGTATACTATACCATTTATCACTATATCTCTCACCCAGTAGAAGGAAA
                      ____________________________________________________________
consensus             GAGAGAGAGAGGGGTATACTATACCATTTATCACTATATCTCTCACCCAGTAGAAGGAAA
 
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JMSF036G10+           GGAAAACTGGCAAAGGAGCTCAGTTACCTGTGTTTTAGCATGAAAGCAAACAAAACAATA
JMSF047I16+           GGAAAACTGGCAAAGGAGCTCAGTTACCTGTGTTTTAGCATGAAAGCAAACAAAACAATA
JMSF035P21+           GGAAAACTGGCAAAGGAGCTCAGTTACCTGTGTTTTAGCATGAAAGCAAACAAAACAATA
                      ____________________________________________________________
consensus             GGAAAACTGGCAAAGGAGCTCAGTTACCTGTGTTTTAGCATGAAAGCAAACAAAACAATA
 
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JMSF036G10+           AGAACCACAGAACAGATGNTTTTCAGATACTGCAAAACCCCCCAGAAACACACTGGGAAG
JMSF047I16+           AGAACCACAGAACAGATGCTTTTCAGATACTGC                           
JMSF035P21+           AGAACCACAGAACAGATGCTTTTCAGATACTGCAAAACCCCCCAGAAACACACTGGGAAG
                      ____________________________________________________________
consensus             AGAACCACAGAACAGATGCTTTTCAGATACTGCAAAACCCCCCAGAAACACACTGGGAAG
 
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JMSF036G10+           CTTTTATTCCAAGAACAAACCACAGCCTCATAAACTTCATGTACTATTTTATTCTTTTC 
JMSF035P21+           CTTTTATTCCAAGAACAAACCACAGCCTCATAAACTTCATGTACTATTTTATTCTTTTCC
                      ____________________________________________________________
consensus             CTTTTATTCCAAGAACAAACCACAGCCTCATAAACTTCATGTACTATTTTATTCTTTTCC