| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036E16 | Sequence | 561 | 010809 (9) | gb|EYU25479.1| | 2e-35 | hypothetical protein MIMGU_mgv1a014113mg [Erythranthe guttata] | 711 | 016998 | gb|EYU25479.1| | 2e-30 | hypothetical protein MIMGU_mgv1a014113mg [Erythranthe guttata] |
| JMFS077B11 | Sequence | 119 | 010809 (9) | ||||||||
| JMSF009D20 | Sequence | 253 | 010809 (9) | 180 | 010809 (9) | ||||||
| JMSF009E20 | Sequence | 441 | 010809 (9) | ref|XP_009796224.1| | 4e-08 | PREDICTED: F-box protein GID2 [Nicotiana sylvestris] | 734 | 010809 (9) | gb|ADO61003.1| | 3e-35 | sleepy 1 [Helianthus annuus] |
| JMSF021J23 | Sequence | 692 | 010809 (9) | ref|XP_009796224.1| | 2e-35 | PREDICTED: F-box protein GID2 [Nicotiana sylvestris] | 758 | 000235 (181) | ref|XP_008456347.1| | 7e-168 | PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] |
| JMSF035P13 | Sequence | 624 | 010809 (9) | ref|XP_009796224.1| | 1e-23 | PREDICTED: F-box protein GID2 [Nicotiana sylvestris] | 680 | 010809 (9) | gb|ADO61004.1| | 7e-35 | sleepy 1 [Helianthus annuus] |
This contig is upended
. : . : . : . : . : . :
rJMSF009D20- TTACAGATCTCTA
rJMSF035P13- TACAATACAAGCCATTACAGATCTCTA
rJMSF009E20- TTACAGATCTCTA
____________________________________________________________
consensus TACAATACAAGCCATTACAGATCTCTA
. : . : . : . : . : . :
rJMSF009D20- ATCCNAATGATATANNTCGAGTTAAAANCAAATNCAGATAGATCNTAGATGAGTATGAAG
rJMSF035P13- ATCCAAATGATATAAATCGAGTTAAAAACAAATACAGATAGATCATAGATGAATATGAAG
rJMSF009E20- ATCCAAATGATATAAATCGAGTTAAAAACAAATACAGATAGATCATAGATGAATATGAAG
JMSF021J23+ CAAATACAGATAGATCATAGATGAATATGAAG
____________________________________________________________
consensus ATCCAAATGATATAAATCGAGTTAAAAACAAATACAGATAGATCATAGATGAATATGAAG
. : . : . : . : . : . :
rJMSF009D20- GAATANTANTAANAGTGAAGCCCNNATTTTGGTGATTTTTATCACGTTTGTTTGTGACGA
rJMSF035P13- GAATAATAATAAAAGTGAAGCCCAAATTTTGGTGATTTTTATCACGTTTGTTTGTGACGA
rJMSF009E20- GAATAATAATAAAAGTGAAGCCCAAATTTTGGTGATTTTTATCACGTTTGTTTGTGACGA
JMSF021J23+ GAATAATAATAAAAGTGAAGCCCAAATTTTGGTGATTTTTATCACGTTTGTTTGTGACGA
____________________________________________________________
consensus GAATAATAATAAAAGTGAAGCCCAAATTTTGGTGATTTTTATCACGTTTGTTTGTGACGA
. : . : . : . : . : . :
rJMSF009D20- TTACTGGAATTCATCTTCTCGTAATACCGGATCGAGAGG
rJMSF035P13- TTACTGGAATTCATCTTCTCGTAATACCGGATCGAGAGGAGGGAGAGCGAGAGATTCATT
rJMSF009E20- TTACTGGAATTCATCTTCTCGTAATACCGGATCGAGAGGAGGGAGAGCGAGAGATTCATT
JMSF021J23+ TTACTGGAATTCATCTTCTCGTAATACCGGATCGAGAGGAGGGAGAGCGAGAGATTCATT
____________________________________________________________
consensus TTACTGGAATTCATCTTCTCGTAATACCGGATCGAGAGGAGGGAGAGCGAGAGATTCATT
. : . : . : . : . : . :
rJMSF035P13- TCGTCGTTTCCCCACCGTGTTTTCCCGGCGGCGAATTTGGCCGACGAAGGCTTTGGAGGC
rJMSF009E20- TCGTCGTTTCCCCACCGTGTTTTCCCGGCGGCGAATTTGGCCGACGAAGGCTTTGGAGGC
JMSF021J23+ TCGTCGTTTCCCCACCGTGTTTTCCCGGCGGNGAATTTGGCCGACGAAGGCTTTGGAGGC
____________________________________________________________
consensus TCGTCGTTTCCCCACCGTGTTTTCCCGGCGGCGAATTTGGCCGACGAAGGCTTTGGAGGC
. : . : . : . : . : . :
rJMSF035P13- GGGGGCAGGCAAGGCCAGGTACATGCCGGCGAGGAGGAGGAAGAGGAGGAGGAGGACGAC
rJMSF009E20- GGGGGCAGGCAAGGCCAGGTACATGCCGGCGAGGAGGAGGAAGAGGAGGAGGAGGACGAC
JMSF021J23+ GGGGGCAGGCAAGGCCAGGTACATGCCGGCGAGGAGGAGGAAGAGGAGGAGGAGGACGAC
JMSF035P13+ GAGGAAGAGGAGGAGGAGGACGAC
____________________________________________________________
consensus GGGGGCAGGCAAGGCCAGGTACATGCCGGCGAGGAGGAGGAAGAGGAGGAGGAGGACGAC
. : . : . : . : . : . :
rJMSF035P13- GACGGTTTAACTAGCGGCCAGAGGTGAAGCGAGTAGAGCCGCCGGAAGCCGCCGAGGGCG
rJMSF009E20- GACGGTTTAACTAGCGGCCAGAGGTGAAGCGAGTAGAGCCGCCGGAAGCCGCCGAGGGCG
JMSF021J23+ GACGGTTTAACTAGCGGCCAGAGGTGAAGCGAGTAGAGCCGCCGGAAGCCGCCGAGGGCG
JMSF035P13+ GACGGTTTAACTAGCGGCCAGAGGTGAAGCGAGTAGAGCCGCCGGAAGCCGCCGAGGGCG
____________________________________________________________
consensus GACGGTTTAACTAGCGGCCAGAGGTGAAGCGAGTAGAGCCGCCGGAAGCCGCCGAGGGCG
. : . : . : . : . : . :
rJMSF035P13- AGGACCACGTTACGGAGCTGCTGCTGTTGCTGATTCCGGCGGGAGCCGTCCTTGAGGCAC
JMFF036E16+ CCGTCCTTGTTGCAC
rJMSF009E20- AGGACCACGTTACGGAGCTGCTGCTGTTGCTGATTCCGGCGGGAGCCGTCCTTGAGGCAC
JMSF021J23+ AGGACCACGTTACGGAGCTGCTGCTGTTGCTGATTCCGGCGGGAGCCGTCCTTGAGGCAC
JMSF035P13+ AGGACCACGTTACGGAGCTGCTGCTGTTGCTGATTCCGGCGGGAGCCGTCCTTGAGGCAC
____________________________________________________________
consensus AGGACCACGTTACGGAGCTGCTGCTGTTGCTGATTCCGGCGGGAGCCGTCCTTGAGGCAC
. : . : . : . : . : . :
rJMSF035P13- ATCAGCTCCCAGAGCCGCTCGTCCTGCGCCGTCCGCTTCCACAGCTTGCTAACGCACGCC
JMFF036E16+ ATCACCTCCCACAACCGCTCGTCCTGCGCCGTCCGGTTCCACTGCTTGCTAACGCACGCC
rJMSF009E20- ATCAGCTCCCAGAGCCGCTCGTCCTGCGCCGTCCGCTTCCACAGCTTGCTAACGCACGCC
JMSF021J23+ ATCAGCTCCCAGAGCCGCTCGTCCTGCGCCGTCCGCTTCCACAGCTTGCTAACGCACGCC
JMSF009E20+ CCACAGCTTGCTAACGCACGCC
JMSF035P13+ ATCAGCTCCCAGAGCCGCTCGTCCTGCGCCGTCCGCTTCCACAGCTTGCTAACGCACGCC
____________________________________________________________
consensus ATCAGCTCCCAGAGCCGCTCGTCCTGCGCCGTCCGCTTCCACAGCTTGCTAACGCACGCC
. : . : . : . : . : . :
rJMSF035P13- GCCCACGCTAGCGTGTGCCAGTCCACGTGTTTCAGCACTTCGTACAGCAAGTTCTCGTCC
JMFF036E16+ GCCCACGCTAACGTGCGCGCGTCGACGTGCTTCAGCACCTCGTACAGCAAGTTCTCGTCC
rJMSF009E20- GCCCACGCTAGCGTGCGCCAGTCCACGTGTTTCAGCACTTCGTACAGCAAGTTCTCGTCC
JMSF021J23+ GCCCACGCTAGCGTGCGCCAGTCCACGTGTTTCAGCACTTCGTACAGCAAGTTCTCGTCC
JMSF009E20+ GCCCACGCTAGCGTGCGCCAGTCCACGTGTTTCAGCACTTCGTACAGCAAGTTCTCGTCC
JMSF035P13+ GCCCACGCTAGCGTGTGCCAGTCCACGTGTTTCAGCACTTCGTACAGCAAGTTCTCGTCC
____________________________________________________________
consensus GCCCACGCTAGCGTGCGCCAGTCCACGTGTTTCAGCACTTCGTACAGCAAGTTCTCGTCC
. : . : . : . : . : . :
rJMSF035P13- AACAACACCGATTCCGTCGGCATCGGTCCCGCCGTCGCCGTCGCCGCTAACGTACGCCCG
JMFF036E16+ ATCAACAC
rJMSF009E20- AACAACACCGATTCCGTCGGCATCGGTCCCGCCGTCGCCGTCGCCGCTAACGTACGCCCG
JMSF021J23+ AACAACACCGATTCCGTCGGCATCGGTCCCGCCGTCGCCGTCGCCGCTAACGTACGCCCG
JMSF009E20+ AACAACACCGATTCCGTCGGCATCGGTCCCGCCGTCGCCGTCGCCGCTAACGTACGCCCG
JMSF035P13+ AACAACACCGATTCCGTCGGCATCGGTCCCGCCGTCGCCGTCGCCGCTAACGTACGCCCG
____________________________________________________________
consensus AACAACACCGATTCCGTCGGCATCGGTCCCGCCGTCGCCGTCGCCGCTAACGTACGCCCG
. : . : . : . : . : . :
rJMSF035P13- GACTCTTTCTCCTCCACCTTCGTCTTCTTCTTCTCCTCCTCCTCCTCCTTCAG
rJMSF009E20- GACTCTTTCTCCTCCACCTTCGTCTTCTTCTTCTCCTCCTCCTCCTCCTTCAGACCGTGG
JMSF021J23+ GACTCTTTCTCCTCCACCTTCGTCTTCTTCTTCTCCTCCTCCTCCTCCTTCAGACCGTGG
JMFS077B11+ TCTTCTTCTTCTCCTCCTCCTCCTCCTTCAGACCGTGG
JMSF009E20+ GACTCTTTCTCCTCCACCTTCGTCTTCTTCTTCTCCTCCTCCTCCTCCTTCAGACCGTGG
JMSF009D20+ CCTTCAGACCGTGG
JMSF035P13+ GACTCTTTCTCCTCCACCTTCGTCTTCTTCTTCTCCTCCTCCTCCTCCTTCAGACCGTGG
____________________________________________________________
consensus GACTCTTTCTCCTCCACCTTCGTCTTCTTCTTCTCCTCCTCCTCCTCCTTCAGACCGTGG
. : . : . : . : . : . :
rJMSF009E20- ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGA
JMSF021J23+ ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGAACAAAAATA
JMFS077B11+ ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGAACAAAAATATAGA
JMSF009E20+ ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGAACAAAAATATAGA
JMSF009D20+ ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGAACAAAAATATAGA
JMSF035P13+ ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGAACAAAAATATAGA
____________________________________________________________
consensus ATTCCGTCGCCGTCGGGAGTATGGGGCCGCTTCATCGGCAGATCTGAACAAAAATATAGA
. : . : . : . : . : . :
JMFS077B11+ GGGAAAAAGGTGCAACTCCGA
JMSF009E20+ GGGAAAAAGGTGCAACTCCGAGGTTAGGTATATAATTTGAAGAAAATAGGGATTGCTGGA
JMSF009D20+ GGGAAAAAGGTGCAACTCCGAGGTTAGGTATATAATTTGAAGAAAATAGGGATTGCTGGA
JMSF035P13+ GGGAAAAAGGTGCAACTCCGAGGTTAGGTATATAATTTGAAGAAAATAGGGATTGCTGGA
____________________________________________________________
consensus GGGAAAAAGGTGCAACTCCGAGGTTAGGTATATAATTTGAAGAAAATAGGGATTGCTGGA
. : . : . : . : . : . :
JMSF009E20+ AAATGGGATGTAGTGGTTCCACAATTACGCAGCATCACATGCATATGGGGCTTTCTTTAT
JMSF009D20+ AAATGGGATGTAGTGGTTCCACAATTACGCAGCATCACATGCATATGGGGCTTTCTTTAT
JMSF035P13+ AAATGGGATGTAGTGGTTCCACAATTACGCAGCATCACATGCATATGGGGCTTTCTTTAT
____________________________________________________________
consensus AAATGGGATGTAGTGGTTCCACAATTACGCAGCATCACATGCATATGGGGCTTTCTTTAT
. : . : . : . : . : . :
JMSF009E20+ CATTATCGACAATCAGAAAGTTGGAGAAATGAATGCCGTTTCCGGGAGTGGATTCCTCC
JMSF009D20+ CATTATCGACAATCAGAAAGTTGGAGAAATGAATGCCGTTTCCGGGAGTGGATTCCTCC
JMSF035P13+ CATTATCGACAATCAGAAAGTTGGAGAAATGAATGCCGTTTCCGGGAGTGGATTCCTCCA
____________________________________________________________
consensus CATTATCGACAATCAGAAAGTTGGAGAAATGAATGCCGTTTCCGGGAGTGGATTCCTCCA