clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002B05 | Sequence | 490 | 010807 (7) | ref|NP_001275054.1| | 1e-62 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | 748 | 008119 (6) | emb|CBI22296.3| | 1e-65 | unnamed protein product [Vitis vinifera] |
JMFF003F05 | Sequence | 516 | 010807 (7) | ref|NP_001275054.1| | 1e-69 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | 679 | 008119 (6) | emb|CBI22296.3| | 8e-77 | unnamed protein product [Vitis vinifera] |
JMFF005C12 | Sequence | 498 | 010807 (7) | ref|NP_001275054.1| | 6e-67 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | 686 | 008119 (6) | emb|CBI22296.3| | 2e-77 | unnamed protein product [Vitis vinifera] |
JMFF036M01 | Sequence | 490 | 010807 (7) | ref|NP_001275054.1| | 5e-70 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | 749 | 008119 (6) | emb|CBI22296.3| | 1e-64 | unnamed protein product [Vitis vinifera] |
JMFF047L20 | Sequence | 604 | 010807 (7) | ref|NP_001275054.1| | 2e-82 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | 568 | 008119 (6) | emb|CBI22296.3| | 4e-40 | unnamed protein product [Vitis vinifera] |
JMFS085B08 | Sequence | 615 | 010807 (7) | ref|NP_001275054.1| | 4e-85 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | |||||
JMSF035L03 | Sequence | 699 | 010807 (7) | ref|NP_001275054.1| | 2e-99 | probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu | 662 | 008119 (6) | emb|CBI22296.3| | 1e-77 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF035L03+ GAATCACATCTCGCTCCCTTTCGATTCGTTTCTGATCAA
____________________________________________________________
consensus GAATCACATCTCGCTCCCTTTCGATTCGTTTCTGATCAA
. : . : . : . : . : . :
JMFS085B08+ ATATCCAAAGCCCTGGTGATATCTTTATCCA
JMFF047L20+ ATCCA
JMSF035L03+ ATTTCGAGTTCTGAATAATATCCGACAATATATCCAAAGCCCTGGTGATATCTTTATCCA
____________________________________________________________
consensus ATTTCGAGTTCTGAATAATATCCGACAATATATCCAAAGCCCTGGTGATATCTTTATCCA
. : . : . : . : . : . :
JMFS085B08+ AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
JMFF047L20+ AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
JMSF035L03+ AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
____________________________________________________________
consensus AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
. : . : . : . : . : . :
JMFS085B08+ TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMFF047L20+ TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMFF005C12+ TCCGTGCCCTTGAAGATCA
JMFF036M01+ CTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMFF002B05+ GTCTCTCCGTGCCCTTGAAGATCA
JMFF003F05+ TCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMSF035L03+ TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
____________________________________________________________
consensus TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
. : . : . : . : . : . :
JMFS085B08+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF047L20+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF005C12+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF036M01+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF002B05+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF003F05+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMSF035L03+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
____________________________________________________________
consensus TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
. : . : . : . : . : . :
JMFS085B08+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF047L20+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF005C12+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF036M01+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF002B05+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF003F05+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMSF035L03+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
____________________________________________________________
consensus CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
. : . : . : . : . : . :
JMFS085B08+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF047L20+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF005C12+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF036M01+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF002B05+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF003F05+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMSF035L03+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
____________________________________________________________
consensus GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
. : . : . : . : . : . :
JMFS085B08+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF047L20+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF005C12+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF036M01+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF002B05+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF003F05+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMSF035L03+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
____________________________________________________________
consensus CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
. : . : . : . : . : . :
JMFS085B08+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF047L20+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF005C12+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF036M01+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF002B05+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF003F05+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMSF035L03+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
____________________________________________________________
consensus TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
. : . : . : . : . : . :
JMFS085B08+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF047L20+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF005C12+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF036M01+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF002B05+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF003F05+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMSF035L03+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
____________________________________________________________
consensus GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
. : . : . : . : . : . :
JMFS085B08+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF047L20+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF005C12+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF036M01+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF002B05+ GCTTGCCGCGTCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF003F05+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMSF035L03+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
____________________________________________________________
consensus GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
. : . : . : . : . : . :
JMFS085B08+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTG
JMFF047L20+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGT
JMFF005C12+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGT
JMFF036M01+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCT
JMFF002B05+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGT
JMFF003F05+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGT
JMSF035L03+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGTC
____________________________________________________________
consensus GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGTC