Contig 010807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002B05Sequence490010807 (7)ref|NP_001275054.1|1e-62probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu748008119 (6)emb|CBI22296.3|1e-65unnamed protein product [Vitis vinifera]
JMFF003F05Sequence516010807 (7)ref|NP_001275054.1|1e-69probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu679008119 (6)emb|CBI22296.3|8e-77unnamed protein product [Vitis vinifera]
JMFF005C12Sequence498010807 (7)ref|NP_001275054.1|6e-67probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu686008119 (6)emb|CBI22296.3|2e-77unnamed protein product [Vitis vinifera]
JMFF036M01Sequence490010807 (7)ref|NP_001275054.1|5e-70probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu749008119 (6)emb|CBI22296.3|1e-64unnamed protein product [Vitis vinifera]
JMFF047L20Sequence604010807 (7)ref|NP_001275054.1|2e-82probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu568008119 (6)emb|CBI22296.3|4e-40unnamed protein product [Vitis vinifera]
JMFS085B08Sequence615010807 (7)ref|NP_001275054.1|4e-85probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu
JMSF035L03Sequence699010807 (7)ref|NP_001275054.1|2e-99probable mitochondrial-processing peptidase subunit beta-like [Solanum tuberosu662008119 (6)emb|CBI22296.3|1e-77unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035L03+ GAATCACATCTCGCTCCCTTTCGATTCGTTTCTGATCAA
                      ____________________________________________________________
consensus GAATCACATCTCGCTCCCTTTCGATTCGTTTCTGATCAA
 
. : . : . : . : . : . :
JMFS085B08+ ATATCCAAAGCCCTGGTGATATCTTTATCCA
JMFF047L20+ ATCCA
JMSF035L03+ ATTTCGAGTTCTGAATAATATCCGACAATATATCCAAAGCCCTGGTGATATCTTTATCCA
                      ____________________________________________________________
consensus ATTTCGAGTTCTGAATAATATCCGACAATATATCCAAAGCCCTGGTGATATCTTTATCCA
 
. : . : . : . : . : . :
JMFS085B08+ AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
JMFF047L20+ AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
JMSF035L03+ AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
                      ____________________________________________________________
consensus AGACTTTGGCATAGAACGTAGTTTGCTCCCTGGAAGTGTATGCATTTAGATGCCCTCCCA
 
. : . : . : . : . : . :
JMFS085B08+ TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMFF047L20+ TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMFF005C12+ TCCGTGCCCTTGAAGATCA
JMFF036M01+ CTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMFF002B05+ GTCTCTCCGTGCCCTTGAAGATCA
JMFF003F05+ TCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
JMSF035L03+ TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
                      ____________________________________________________________
consensus TGTTCTCAATCTCCTCCTCTAACTCCCTAGCAGTCCGTCTCTCCGTGCCCTTGAAGATCA
 
. : . : . : . : . : . :
JMFS085B08+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF047L20+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF005C12+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF036M01+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF002B05+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMFF003F05+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
JMSF035L03+ TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
                      ____________________________________________________________
consensus TGTGCTCGAGGAAATGAGCGGTGCCGTTAGTCTCCTCCGTCTCGAACCGAGAGCCGGCGT
 
. : . : . : . : . : . :
JMFS085B08+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF047L20+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF005C12+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF036M01+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF002B05+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMFF003F05+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
JMSF035L03+ CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
                      ____________________________________________________________
consensus CAATGAACACGCCGACGGTGGCAGTTTTAGCGGCGAGGTTGGACTCGGTGGCGACTCTTA
 
. : . : . : . : . : . :
JMFS085B08+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF047L20+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF005C12+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF036M01+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF002B05+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMFF003F05+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
JMSF035L03+ GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
                      ____________________________________________________________
consensus GTCCGTTCGGCAAAGTGGTGACGCGGGTAGCAGGGGCAGTGAGGATTGCAGTGTGGTCGG
 
. : . : . : . : . : . :
JMFS085B08+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF047L20+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF005C12+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF036M01+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF002B05+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMFF003F05+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
JMSF035L03+ CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
                      ____________________________________________________________
consensus CCAAAACTGGATGGGGGGAGTTGTATTGGAGAAAGCGCGAGTCGGGGTTTTCTAGCCGCT
 
. : . : . : . : . : . :
JMFS085B08+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF047L20+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF005C12+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF036M01+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF002B05+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMFF003F05+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
JMSF035L03+ TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
                      ____________________________________________________________
consensus TCAGTTTATGTTTCACGGATTCGGCTAGGCGATCGTAGATCATGGCGGTTGGAGGCGGCG
 
. : . : . : . : . : . :
JMFS085B08+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF047L20+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF005C12+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF036M01+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF002B05+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMFF003F05+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
JMSF035L03+ GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
                      ____________________________________________________________
consensus GCGACGGCGCCAGAGTTCCATTTGCGGCGGCTGCAACGGCTGCGGAGGATGAGGAAAAAG
 
. : . : . : . : . : . :
JMFS085B08+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF047L20+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF005C12+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF036M01+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF002B05+ GCTTGCCGCGTCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMFF003F05+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
JMSF035L03+ GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
                      ____________________________________________________________
consensus GCTTGCCGCATCGGGAAGCGATAGTTCTCCTCGACCGACGGGCTAGATTTAGGAGCTGCC
 
. : . : . : . : . : . :
JMFS085B08+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTG
JMFF047L20+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGT
JMFF005C12+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGT
JMFF036M01+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCT
JMFF002B05+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGT
JMFF003F05+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGT
JMSF035L03+ GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGTC
                      ____________________________________________________________
consensus GGATCGCCATGGCTGCTGGCTGCGATTCGACTCGCTAGGGTTTGGTGAGAAAATGGTGTC