Contig 010804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005F23Sequence409010804 (3)ref|XP_011072176.1|4e-29PREDICTED: ferric reduction oxidase 8, mitochondrial, partial [Sesamum indicum]
JMSF030N19Sequence653010804 (3)ref|XP_006344463.1|2e-68PREDICTED: ferric reduction oxidase 8, mitochondrial-like [Solanum tuberosum]614008566 (2)ref|XP_009613740.1|1e-35PREDICTED: ferric reduction oxidase 8, mitochondrial isoform X2 [Nicotiana tome
JMSF035J16Sequence698010804 (3)ref|XP_009798365.1|3e-76PREDICTED: ferric reduction oxidase 8, mitochondrial isoform X2 [Nicotiana sylv725008566 (2)ref|XP_009613740.1|1e-59PREDICTED: ferric reduction oxidase 8, mitochondrial isoform X2 [Nicotiana tome

Alignment

This contig is upended


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JMSF035J16+                                CCCATATGAAGAAAGTGCCTGCACCGTGCAACGTGGCAA
                      ____________________________________________________________
consensus                                  CCCATATGAAGAAAGTGCCTGCACCGTGCAACGTGGCAA
 
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JMSF030N19+               TATCATTGCAGTGCCAAGCCAGGTGTGGTATCTCACTGAAACTTCAAACTGGAGAC
JMSF035J16+           AGACTATCATTGCAGTGCCAAGCCAGGTGTGGTATCTCACTGAAACTTCAAACTGGAGAC
                      ____________________________________________________________
consensus             AGACTATCATTGCAGTGCCAAGCCAGGTGTGGTATCTCACTGAAACTTCAAACTGGAGAC
 
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JMSF030N19+           CCAGCAACCGGAACACAGCCATCCTTCTCAACACAGGAAGAAGGAGAAGGGCTAAGCAGG
JMSF035J16+           CCAGCAACCGGAACACAGCCATCCTTCTCAACACAGGAAGAAGGAGAAGGGCTAAGCAGG
                      ____________________________________________________________
consensus             CCAGCAACCGGAACACAGCCATCCTTCTCAACACAGGAAGAAGGAGAAGGGCTAAGCAGG
 
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JMSF030N19+           CCTCTGTCAGTAAACCAAACCGTGTAGCCACTCTCAACATTCTGTATTGCCATACTGCCA
JMSF035J16+           CCTCTGTCAGTAAACCAAACCGTGTAGCCACTCTCAACATTCTGTATTGCCATACTGCCA
                      ____________________________________________________________
consensus             CCTCTGTCAGTAAACCAAACCGTGTAGCCACTCTCAACATTCTGTATTGCCATACTGCCA
 
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JMSF030N19+           GCTTGAAATCTTTGGTTTGAACCGTTTTCCTGAAATCATTAGAAATGCGAGTGTAGAAAG
JMSF035J16+           GCTTGAAATCTTTGGTTTGAACCGTTTTCCTGAAATCATTAGAAATGCGAGTGTAGAAAG
                      ____________________________________________________________
consensus             GCTTGAAATCTTTGGTTTGAACCGTTTTCCTGAAATCATTAGAAATGCGAGTGTAGAAAG
 
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JMSF030N19+           TCCATGCCAGAAAGATGATGAAGAGAGACACACCAAGGATTTCAAT-CCCAGATAAGATG
JMSF005F23+                        GATGATGAAGAGAGNCACACCAGGGATTTCAATCCCCAGATAAGATG
JMSF035J16+           TCCATGCCAGAAAGATGATGAAGAGAGACACACCAAGGATTTCAAT-CCCAGATAAGATG
                      ____________________________________________________________
consensus             TCCATGCCAGAAAGATGATGAAGAGAGACACACCAAGGATTTCAAT-CCCAGATAAGATG
 
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JMSF030N19+           CCAAGAGAACTCTTCACAATCAAAGGATTGCTGAGAAAGGCTAAACATCTCCTTTCTTGC
JMSF005F23+           CCAAGAGAACTCTTCACAATCAAAGGATTGCTGAGAAAGGCTAAACATCTCCTTTCTTGC
JMSF035J16+           CCAAGAGAACTCTTCACAATCAAAGGATTGCTGAGAAAGGCTAAACATCTCCTTTCTTGC
                      ____________________________________________________________
consensus             CCAAGAGAACTCTTCACAATCAAAGGATTGCTGAGAAAGGCTAAACATCTCCTTTCTTGC
 
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JMSF030N19+           CTGGAGATTCCTTCCTTCTGCTTCTGCTTCTTCTGTTCCAAGTAAACGAAACCGACTATG
JMSF005F23+           CTGGAGATTCCTTCCTTCTGCTTCTGCTTCTTCTGTTCCAAGTAAACGAAACCGACTATG
JMSF035J16+           CTGGAGATTCCTTCCTTCTGCTTCTGCTTCTTCTGTTCCAAGTAAACGAAACCGACTATG
                      ____________________________________________________________
consensus             CTGGAGATTCCTTCCTTCTGCTTCTGCTTCTTCTGTTCCAAGTAAACGAAACCGACTATG
 
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JMSF030N19+           GCGAAAGCAATGACAGGAAACGTGTAGACAGCGAAACAAAGGCCATTATAGCCAAAAACA
JMSF005F23+           GCGAAAGCAATGACAGGAAACGTGTAGACAGCGAAACAAAGGCCATTATAGCCAAAAACA
JMSF035J16+           GCGAAAGCAATGACAGGAAACGTGTAGACAGCGAAACAAAGGCCATTATAGCCAAAAACA
                      ____________________________________________________________
consensus             GCGAAAGCAATGACAGGAAACGTGTAGACAGCGAAACAAAGGCCATTATAGCCAAAAACA
 
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JMSF030N19+           GAAGCTGATGCTTTTTCTTCTGCTGCCTTCCAAGTTCTTGTCCATACTTGTGTTGGCTTG
JMSF005F23+           GAAGCTGATGCTTTTTCTTCTGCTGCCTTCCAAGTTCTTGTCCATACTTGTGTTGGCTTG
JMSF035J16+           GAAGCTGATGCTTTTTCTTCTGCTGCCTTCCAAGTTCTTGTCCATACTTGTGTTGGCTTG
                      ____________________________________________________________
consensus             GAAGCTGATGCTTTTTCTTCTGCTGCCTTCCAAGTTCTTGTCCATACTTGTGTTGGCTTG
 
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JMSF030N19+           AGAATCCAGAGAGAAACCCAACCAGTAGATACCAAGATAAGAAGAAGTTTTAGAATAAGA
JMSF005F23+           AGAATCCAGAGAGAAACCCAACCAGTAGATACCAAGATAAGAAGAAGTTTTAGAATAAGA
JMSF035J16+           AGAATCCAGAGAGAAACCCAACCAGTAGATACCAAGATAAGAAGAAGTTTTAGAATAAGA
                      ____________________________________________________________
consensus             AGAATCCAGAGAGAAACCCAACCAGTAGATACCAAGATAAGAAGAAGTTTTAGAATAAGA
 
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JMSF030N19+           AGACTGGCTTTAGCCATTTATTATGACTGAATTGAATTATACTTTTTTTATGAGTCT   
JMSF005F23+           AGACTGGCTTTAGCCATTTATTATGACTGAATTGAATTATACTTTTTTTATGAGTCT   
JMSF035J16+           AGACTGGCTTTAGCCATTTATTATGACTGAATTGAATTATACTTTTTTTATGAGTCTATC
                      ____________________________________________________________
consensus             AGACTGGCTTTAGCCATTTATTATGACTGAATTGAATTATACTTTTTTTATGAGTCTATC