| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS156B10 | Sequence | 597 | 010803 (5) | ref|XP_009783617.1| | 3e-98 | PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris] | |||||
| JMSF004L18 | Sequence | 388 | 010803 (5) | ref|XP_009783617.1| | 4e-36 | PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris] | 155 | 010055 (3) | emb|CDP01562.1| | 1e-15 | unnamed protein product [Coffea canephora] |
| JMSF005M14 | Sequence | 359 | 010803 (5) | ref|XP_009783617.1| | 2e-28 | PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris] | |||||
| JMSF035E21 | Sequence | 669 | 010803 (5) | ref|XP_009783617.1| | 8e-93 | PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris] | 665 | 010055 (3) | ref|XP_006353172.1| | 8e-113 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMSF040H04 | Sequence | 648 | 010803 (5) | ref|XP_009783617.1| | 7e-98 | PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris] | 863 | 010055 (3) | ref|XP_009783617.1| | 7e-149 | PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS156B10+ ATAATAGTCCCTTGTGCTCCAAG
JMSF040H04+ CTGAGGCATAATAGTCCCTTGTGCTCCAAG
JMSF035E21+ TGCTCCAAG
____________________________________________________________
consensus CTGAGGCATAATAGTCCCTTGTGCTCCAAG
. : . : . : . : . : . :
JMFS156B10+ AGAATTCATCGGGCAGCTCCTTTACTATAGATATATCATCTTTCAAAACATGGATGAAGT
JMSF040H04+ AGAATTCATCGGGCAGCTCCTTTACTATAGATATATCATCTTTCAAAACATGGATGAAGT
JMSF035E21+ AGAATTCATCGGGCAGCTCCTTTACTATAGATATATCATCTTTCAAAACATGGATGAAGT
____________________________________________________________
consensus AGAATTCATCGGGCAGCTCCTTTACTATAGATATATCATCTTTCAAAACATGGATGAAGT
. : . : . : . : . : . :
JMFS156B10+ GATCCACATCGAAGATATCCATGAAAGAGCTTGAATCTTGCCAAACAGGATTTACCTCCA
JMSF040H04+ GATCCACATCGAAGATATCCATGAAAGAGCTTGAATCTTGCCAAACAGGATTTACCTCCA
JMSF035E21+ GATCCACATCGAAGATATCCATGAAAGAGCTTGAATCTTGCCAAACAGGATTTACCTCCA
____________________________________________________________
consensus GATCCACATCGAAGATATCCATGAAAGAGCTTGAATCTTGCCAAACAGGATTTACCTCCA
. : . : . : . : . : . :
JMFS156B10+ AATAAGGAATCACAAGAGTGGCATTAAGAATTTTTGCAATAGCAACTGCATCACAAATCC
JMSF040H04+ AATAAGGAATCACAAGAGTGGCATTAAGAATTTTTGCAATAGCAACTGCATCACAAATCC
JMSF035E21+ AATAAGGAATCACAAGAGTGGCATTAAGAATTTTTGCAATAGCAACTGCATCACAAATCC
____________________________________________________________
consensus AATAAGGAATCACAAGAGTGGCATTAAGAATTTTTGCAATAGCAACTGCATCACAAATCC
. : . : . : . : . : . :
JMFS156B10+ CCATTCTCTGTTGATTCAATCCTCCATCAAGGAACACCTGAATGTATCCCTCAGACTTTC
JMSF040H04+ CCATTCTCTGTTGATTCAATCCTCCATCAAGGAACACCTGAATGTATCCCTCAGACTTTC
JMSF004L18+ TCAGACTTTC
JMSF035E21+ CCATTCTCTGTTGATTCAATCCTCCATCAAGGAACACCTGAATGTATCCCTCAGACTTTC
____________________________________________________________
consensus CCATTCTCTGTTGATTCAATCCTCCATCAAGGAACACCTGAATGTATCCCTCAGACTTTC
. : . : . : . : . : . :
JMFS156B10+ CAGGTAATGTGGAGACAACACCGGATTCAGTGTAGGGATTCCATCCTTGATTAGACAAAG
JMSF040H04+ CAGGTAATGTGGAGACAACACCGGATTCAGTGTAGGGATTCCATCCTTGATTAGACAAAG
JMSF004L18+ CAGGTAATGTGGAGACAACACCGGATTCAGTGTAGGGATTCCATCCTTGATTAGACAAAG
JMSF005M14+ CTTGATTAGACAAAG
JMSF035E21+ CAGGTAATGTGGAGACAACACCGGATTCAGTGTAGGGATTCCATCCTTGATTAGACAAAG
____________________________________________________________
consensus CAGGTAATGTGGAGACAACACCGGATTCAGTGTAGGGATTCCATCCTTGATTAGACAAAG
. : . : . : . : . : . :
JMFS156B10+ GCATCCATAACTCAGACTGCTCTTCATGGGTAGATTGGCGTTGCAAAGCACTCTTGAAAA
JMSF040H04+ GCATCCATAACTCAGACTGCTCTTCATGGGTAGATTGGCGTTGCAAAGCACTCTTGAAAA
JMSF004L18+ GCATCCATAACTCAGACTGCTCTTCATGGGTAGATNGGCGTTGCAAAGCACTCTTGAAAA
JMSF005M14+ GCATCCATAACTCAGACTGCTCTTCATGGGTAGATNGGCGTTGCAAAGCACTCTTGAAAA
JMSF035E21+ GCATCCATAACTCAGACTGCTCTTCATGGGTAGATTGGCGTTGCAAAGCACTCTTGAAAA
____________________________________________________________
consensus GCATCCATAACTCAGACTGCTCTTCATGGGTAGATTGGCGTTGCAAAGCACTCTTGAAAA
. : . : . : . : . : . :
JMFS156B10+ GGCGTGAGTGCCTAGTTTTTGGAGCATTCCATTCCGTGAGAATAGATGGTGAAGCATGGC
JMSF040H04+ GGCGTGAGTGCCTAGTTTTTGGAGCATTCCATTCCGTGAGAATAGATGGTGAAGCATGGC
JMSF004L18+ GGCGTGAGTGCCTAGTTTTTGGAGCATTCCATTCCGTGAGAATAGATGGTGAAGCATGGC
JMSF005M14+ GGCGTGAGTGCCTAGTTTTTGGAGCATTCCATTCCGTGAGAATAGATGGTGAAGCATGGC
JMSF035E21+ GGCGTGAGTGCCTAGTTTTTGGAGCATTCCATTCCGTGAGAATAGATGGTGAAGCATGGC
____________________________________________________________
consensus GGCGTGAGTGCCTAGTTTTTGGAGCATTCCATTCCGTGAGAATAGATGGTGAAGCATGGC
. : . : . : . : . : . :
JMFS156B10+ TCAACGAAGTGAAGAGGCTGGGGAAGAAAATGGGTAAAAGCAGGACAAAAAGGGCAGCCA
JMSF040H04+ TCAACGAAGTGAAGAGGCTGGGGAAGAAAATGGGTAAAAGCAGGACAAAAAGGGCAGCCA
JMSF004L18+ TCAACGAAGTGAAGAGGCTGGGGAAGAAAATGGGTAAAAGCAGGACAAAAAGGGCAGCCA
JMSF005M14+ TCAACGAAGTGAAGAGGCTGGGGAAGAAAATGGGTAAAAGCAGGACAAAAAGGGCAGCCA
JMSF035E21+ TCAACGAAGTGAAGAGGCTGGGGAAGAAAATGGGTAAAAGCAGGACAAAAAGGGCAGCCA
____________________________________________________________
consensus TCAACGAAGTGAAGAGGCTGGGGAAGAAAATGGGTAAAAGCAGGACAAAAAGGGCAGCCA
. : . : . : . : . : . :
JMFS156B10+ TTGCTCCCCCTCTGCTACTGTGGCAGTGATAAACACTCATGACGGTAACGGATCCAGTTG
JMSF040H04+ TTGCTCCCCCTCTGCTACTGTGGCAGTGATAAACACTCATGACGGTAACGGATCCAGTTG
JMSF004L18+ TTGCTCCCCCTCTGCTACTGTGGCAGTGATAAACACTCATGACGGTAACGGATCCAGTTG
JMSF005M14+ TTGCTCCCCCTCTGCTACTGTGGCAGTGATAAACACTCATGACGGTAACGGATCCAGTTG
JMSF035E21+ TTGCTCCCCCTCTGCTACTGTGGCAGTGATAAACACTCATGACGGTAACGGATCCAGTTG
____________________________________________________________
consensus TTGCTCCCCCTCTGCTACTGTGGCAGTGATAAACACTCATGACGGTAACGGATCCAGTTG
. : . : . : . : . : . :
JMFS156B10+ GCGGCAACAGTGTCGGTGGAGGAGAGAA
JMSF040H04+ GCGGCAACAGTGTCGGTGGAGGAGAGAATGGCGCTGGCGGGTGGCGTGGAGAGGACAAAG
JMSF004L18+ GCGGCAACAGTGTCGGTGGAGGAGAGAATGGCGCTGGCGGGTGGCGTGGAGAGGACAAAG
JMSF005M14+ GCGGCAACAGTGTCGGTGGAGGAGAGAATGGCGCTGGCGGGTGGCGTGGAGAGGACAAAG
JMSF035E21+ GCGGCAACAGTGTCGGTGGAGGAGAGAATGGCGCTGGCGGGTGGCGTGGAGAGGACAAAG
____________________________________________________________
consensus GCGGCAACAGTGTCGGTGGAGGAGAGAATGGCGCTGGCGGGTGGCGTGGAGAGGACAAAG
. : . : . : . : . : . :
JMSF040H04+ GGAGGGGGGGACTGTAT
JMSF004L18+ GGAGGGGGGGACTGTAT
JMSF005M14+ GGAGGGGGGGACTGTATGAGCCTCAAAACAGAGTCTTGACG
JMSF035E21+ GGAGGGGGGGACTGTATGAGCCTCAAAACAGAGTCTTGACGACAATACAAGATGAAAACC
____________________________________________________________
consensus GGAGGGGGGGACTGTATGAGCCTCAAAACAGAGTCTTGACGACAATACAAGATGAAAACC