Contig 010801:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS155F10+                                                                      A
JMSF035D04+                                  ANTAGATGATACTGATGCTCAAGCANGTGATTGAACA
                      ____________________________________________________________
consensus                                    ANTAGATGATACTGATGCTCAAGCANGTGATTGAACA
 
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JMFS155F10+           ATATGATNTGTTTCTTCAGTTTCAATCTTATGTAGTAGGCTCGAAAAAAAATCAGCATTT
JMSF035D04+           ATATGATTTGTTTCTTCAGTTTCAATCTTATGTAGTAAGCCCG-AAAAAAATCAGCATTT
                      ____________________________________________________________
consensus             ATATGATTTGTTTCTTCAGTTTCAATCTTATGTAGTAGGCTCGAAAAAAAATCAGCATTT
 
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JMFS155F10+           TCTTCTTCCAACTTTTGCCAAACTAGAGTTGTAAATCCAGGGTCTATCTTTGCACGGCTG
JMSF035D04+           TCTTCTTCCAACTTTTGCCACACTAAAGTTGTAAATCCAGGGTCTATCCTTGCACGGTTT
                      ____________________________________________________________
consensus             TCTTCTTCCAACTTTTGCCACACTAGAGTTGTAAATCCAGGGTCTATCTTTGCACGGTTT
 
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JMFS155F10+           ACAAGTGTTTTCACTACTTCATCTCTATTCATATACAACTGCAAACATCTCTCAATCAAG
JMSF035D04+           AGAAGTGTTTTAACCACTTCATCTCTATTCATATACAACTGCAAACACCTCTCAATCAAG
                      ____________________________________________________________
consensus             AGAAGTGTTTTCACTACTTCATCTCTATTCATATACAACTGCAAACATCTCTCAATCAAG
 
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JMFS155F10+           TTTTGAACAAGCTCAATATCTTCATGTGAAACTTTCCTGTTTCCGTTGCCAGTTGCAGAA
JMSF035D04+           TTTTGAACGAGCTCAATATCTTCCCGTGAAACTTTCCTGTTTTCATTGCCAGTTGCATAA
                      ____________________________________________________________
consensus             TTTTGAACGAGCTCAATATCTTCCTGTGAAACTTTCCTGTTTTCGTTGCCAGTTGCATAA
 
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JMFS155F10+           ACTGATCCTGAATCTGCAACAGGATTCTCTGTTTTATTGTTCAGTTGGTCATTTTGGGAA
JMSF035D04+           ACTGATCCTGAATCTGCAACAGGATTCTCTGTTGTATTGTTCTGTTGGTCATTTTGGGAG
                      ____________________________________________________________
consensus             ACTGATCCTGAATCTGCAACAGGATTCTCTGTTTTATTGTTCTGTTGGTCATTTTGGGAG
 
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JMFS155F10+           TCATGTGAGACTGAGACCTGCGTTGAAGGTTGTTTCTCTTGTGTTTTATGTGAGTCCTGT
JMSF035D04+           TCATGTGAGACT------TGGGTTGAAGGTTGTTTCTCTTGTGTTTTTTGTGTGTCCTGT
                      ____________________________________________________________
consensus             TCATGTGAGACTGAGACCTGGGTTGAAGGTTGTTTCTCTTGTGTTTTTTGTGTGTCCTGT
 
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JMFS155F10+           GAAGTCGTCATTTTAGCCAAGTGAAAGCACACTAAATATCTCCATGAATCTTCAATAATT
JMSF035D04+           GAAGTCTTCA-TTTAGCCAAGTGAAAACACANTAAATATCTCCANGAATATTCAATAATT
                      ____________________________________________________________
consensus             GAAGTCTTCATTTTAGCCAAGTGAAAGCACACTAAATATCTCCATGAATCTTCAATAATT
 
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JMFS155F10+           CAGAGCAATAAGATGGAAG                                         
JMSF035D04+           CAGAGCAACAAGATAGAAGATGCTTCATTTTAACAGTCCCTGCTTCTAATAAGACTGAAG
                      ____________________________________________________________
consensus             CAGAGCAATAAGATGGAAGATGCTTCATTTTAACAGTCCCTGCTTCTAATAAGACTGAAG
 
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JMSF035D04+           ACANTAAGTAGAAGTACTTCAACGTGTAGACAAGACCGGTCAAAGAGTGATAAGCTGTGA
                      ____________________________________________________________
consensus             ACANTAAGTAGAAGTACTTCAACGTGTAGACAAGACCGGTCAAAGAGTGATAAGCTGTGA
 
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JMSF035D04+           AGTCGGAAGGACGGAATGGTGGCGGCGAAGAGCTGCCGGCGTTGAGCAAACTCAGAGAGA
                      ____________________________________________________________
consensus             AGTCGGAAGGACGGAATGGTGGCGGCGAAGAGCTGCCGGCGTTGAGCAAACTCAGAGAGA
 
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JMSF035D04+           GAGAGAGAGAGAGAGAGAGATTTTGGTGCTAAGTACTAAGCTGTGTTTAGCGAGAGAGTC
                      ____________________________________________________________
consensus             GAGAGAGAGAGAGAGAGAGATTTTGGTGCTAAGTACTAAGCTGTGTTTAGCGAGAGAGTC