clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF007E24 | Sequence | 381 | 010800 (4) | ref|XP_011073375.1| | 89.0 | PREDICTED: uncharacterized protein LOC105158344 [Sesamum indicum] | 785 | 014125 (4) | ref|XP_009619537.1| | 293 | PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis] |
JMSF034O23 | Sequence | 704 | 010800 (4) | ref|XP_007023340.1| | 2e-32 | Uncharacterized protein TCM_027327 [Theobroma cacao] gb|EOY25962.1| Uncharacteri | 590 | 014125 (4) | ref|XP_009619537.1| | 255 | PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis] |
JMSF046P02 | Sequence | 761 | 010800 (4) | ref|XP_007023340.1| | 6e-40 | Uncharacterized protein TCM_027327 [Theobroma cacao] gb|EOY25962.1| Uncharacteri | 750 | 014125 (4) | ref|XP_009619537.1| | 223 | PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis] |
JMSF051E14 | Sequence | 690 | 010800 (4) | ref|XP_007023340.1| | 3e-33 | Uncharacterized protein TCM_027327 [Theobroma cacao] gb|EOY25962.1| Uncharacteri | 727 | 014125 (4) | ref|XP_009619537.1| | 279 | PREDICTED: uncharacterized protein LOC104111530 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF046P02+ TNTTAGTTTGTAGACCGTGGAATCTGCTTGGGCCACAACAAA
____________________________________________________________
consensus TNTTAGTTTGTAGACCGTGGAATCTGCTTGGGCCACAACAAA
. : . : . : . : . : . :
JMSF051E14+ GTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
JMSF046P02+ GTCCATCGTGTCTCTTGTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
JMSF034O23+ GTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
____________________________________________________________
consensus GTCCATCGTGTCTCTTGTACTACCGTAAAACTTGTCTTGTCCAGTATACAGAACCGCAGA
. : . : . : . : . : . :
JMSF051E14+ GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
JMSF046P02+ GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
JMSF034O23+ GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
____________________________________________________________
consensus GCCAATGATTGCAGCAACAGTAAATAACGCCAGAAAGGCAAGTGAAAGTGCATAAGCACT
. : . : . : . : . : . :
JMSF051E14+ TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
JMSF046P02+ TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
JMSF034O23+ TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
____________________________________________________________
consensus TCGGGAGTAACCATAACGAGTTTTCCCGCAGCAGCAACAGCAAAGACAGACTAACAGCAA
. : . : . : . : . : . :
JMSF051E14+ CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
JMSF007E24+ CCAGTAAA
JMSF046P02+ CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
JMSF034O23+ CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
____________________________________________________________
consensus CGCAACGCCAAATCCCAAAAACCAAACAGCAGCGATGAAGAAAAGCGGGGCACCAGTAAA
. : . : . : . : . : . :
JMSF051E14+ AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
JMSF007E24+ AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
JMSF046P02+ AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
JMSF034O23+ AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
____________________________________________________________
consensus AGCCACAGAAGACATGTAATGGTCATTACTGATATTCCATCCACCAGTATAGTAGTTTAG
. : . : . : . : . : . :
JMSF051E14+ CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
JMSF007E24+ CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
JMSF046P02+ CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
JMSF034O23+ CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
____________________________________________________________
consensus CTTGTCAGATGGGTCTTTCCTGTGTGTTCTATCTGCAGCGAGTATCAAGGATGAATTTCC
. : . : . : . : . : . :
JMSF051E14+ ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
JMSF007E24+ ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
JMSF046P02+ ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
JMSF034O23+ ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
____________________________________________________________
consensus ACCATTGTTGTCCTGTAAAAGTGACCTTCCATTTCCCCTAGAAACTGCACCACTATTGCT
. : . : . : . : . : . :
JMSF051E14+ CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
JMSF007E24+ CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
JMSF046P02+ CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
JMSF034O23+ CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
____________________________________________________________
consensus CCCATCAACCACACCTGGAATGGGAGTAGATTCAATGTGATCAATCACAGAAGCTAACCC
. : . : . : . : . : . :
JMSF051E14+ AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
JMSF007E24+ AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
JMSF046P02+ AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
JMSF034O23+ AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
____________________________________________________________
consensus AACTGGAGACAAAAGGGTTATGAAGAATATGAACAGAAAAGAGGGTAAACGGGAGATTTG
. : . : . : . : . : . :
JMSF051E14+ ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
JMSF007E24+ ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
JMSF046P02+ ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
JMSF034O23+ ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
____________________________________________________________
consensus ATTGCTTGAGAGCATGGCTGTTTACTTGTTTAGTGTTTACCCGAGGATTAAAACACTCTA
. : . : . : . : . : . :
JMSF051E14+ AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
JMSF007E24+ AATTCTTGTATT
JMSF046P02+ AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
JMSF034O23+ AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
____________________________________________________________
consensus AATTCTTGTATTGGGTATTGTTTTTCACTATTTTCTTGACTTTATACGGGAAAAGAAAAG
. : . : . : . : . : . :
JMSF051E14+ AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATT
JMSF046P02+ AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATTCAGAATTCTTGCCGT
JMSF034O23+ AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATTCAGAATTCTTGCCGTGTC
____________________________________________________________
consensus AAGCTCAGTGGTCTCTTCAGGAAGGAAGCCAAAAAGGGAATTCAGAATTCTTGCCGTGTC