| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031H05 | Sequence | 462 | 010798 (4) | ref|XP_009788112.1| | 157 | PREDICTED: uncharacterized protein LOC104235970 [Nicotiana sylvestris] | |||||
| JMSF034M22 | Sequence | 622 | 010798 (4) | ref|XP_009788112.1| | 222 | PREDICTED: uncharacterized protein LOC104235970 [Nicotiana sylvestris] | 652 | 018270 | ref|XP_009802461.1| | 2e-106 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104247987 [Nicotiana |
| JMSF038P13 | Sequence | 611 | 010798 (4) | ref|XP_009788112.1| | 285 | PREDICTED: uncharacterized protein LOC104235970 [Nicotiana sylvestris] | 810 | 011097 (2) | ref|XP_002266488.1| | 6e-44 | PREDICTED: proteasome subunit beta type-6 [Vitis vinifera] emb|CBI24056.3| unnam |
| JMSF051E13 | Sequence | 402 | 020123 | gb|EYU30079.1| | 7e-41 | hypothetical protein MIMGU_mgv1a0042811mg, partial [Erythranthe guttata] gb|EYU | 753 | 010798 (4) | ref|XP_009788112.1| | 251 | PREDICTED: uncharacterized protein LOC104235970 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF051E13+ CCTCACTTTTTAAGTCATCTCATTCTTTAATTAGCATCACTT
____________________________________________________________
consensus CCTCACTTTTTAAGTCATCTCATTCTTTAATTAGCATCACTT
. : . : . : . : . : . :
rJMSF051E13+ AGAGCGTCAAGCAAAACCCGTTGTTATTGTGAGGGAAAAAGTAGCTAAGGCTGTACAAGA
____________________________________________________________
consensus AGAGCGTCAAGCAAAACCCGTTGTTATTGTGAGGGAAAAAGTAGCTAAGGCTGTACAAGA
. : . : . : . : . : . :
JMSF038P13+ CATGATGGAAGCATCGTA
rJMSF051E13+ CGTGGTTAGAGAAACTAATCGGTGACATGAATTTACACTGACCATGATGGAAGCATCGTA
JMSF034M22+ GGAAGCATNGTA
____________________________________________________________
consensus CGTGGTTAGAGAAACTAATCGGTGACATGAATTTACACTGACCATGATGGAAGCATCGTA
. : . : . : . : . : . :
JMSF038P13+ CTGGAAGGGTGGCAGTACTGTACTCATGAAGCAAGCCGGTGTGGTTGCAAGTCCCATATC
rJMSF051E13+ CTGGAAGGGTGGCAGTACTGTACTCATGAAGCAAGCCGGTGTGGTTGCAAGTCCCATATC
JMSF034M22+ NNGGAAGGGTGGCAGTACNGTANTCANGAAGCAAGCCGGNGTGGTTGCAAGTCCCATATC
____________________________________________________________
consensus CTGGAAGGGTGGCAGTACTGTACTCATGAAGCAAGCCGGTGTGGTTGCAAGTCCCATATC
. : . : . : . : . : . :
JMSF038P13+ AAACACCAAGCACCCAGCCTGACCCAACCCAGCGAACACAGCCGCACTCAAAGATTTCCC
rJMSF051E13+ AAACACCAAGCACCCAGCCTGACCCAACCCAGCGAACACAGCCGCACTCAAAGATTTCCC
JMSF034M22+ AAACACCAAGCACCCAGCNTGACCCAACCCAGCGAACACAGCCGCACTCAAAGATTTCCC
____________________________________________________________
consensus AAACACCAAGCACCCAGCCTGACCCAACCCAGCGAACACAGCCGCACTCAAAGATTTCCC
. : . : . : . : . : . :
JMSF038P13+ TGAAATTNTAGGATCCATTCCCAGCGAAACCCTAACGCTTTCTACCACCGCCCCACCTCT
rJMSF051E13+ TGAAATTCTAGGATCCATTCCCAGCGAAACCCTAACGCTTTCTACCACCGCCCCACCTCT
JMFF031H05+ TTCCCAGCGAAACCCTAACGCTTTCTACCACCGCCCCACCTCT
JMSF034M22+ TGAAATTNTAGGATCCATTCCCAGCGAAACCCTAACGCTTTNTACCACCGCCCCACCTCT
____________________________________________________________
consensus TGAAATTCTAGGATCCATTCCCAGCGAAACCCTAACGCTTTCTACCACCGCCCCACCTCT
. : . : . : . : . : . :
JMSF038P13+ CTCACTCTCTAACCCACTAATCACCCATTCACCAAAGCTCTCCGCTATTGCTTCCACGGC
rJMSF051E13+ CTCACTCTCTAACCCACTAATCACCCATTCACCAAAGCTCTCCGCTATTGCTTCCACGGC
JMFF031H05+ CTCACTCTCTAACCCACTAATCACCCATTCACCAAAGCTCTCCGCTATTGCTTCCACGGC
JMSF034M22+ CTCACTCTCTAACCCACTAATCACCCATTCACCAAAGCTCTCCGCTATTGCTTCCACGGC
____________________________________________________________
consensus CTCACTCTCTAACCCACTAATCACCCATTCACCAAAGCTCTCCGCTATTGCTTCCACGGC
. : . : . : . : . : . :
JMSF038P13+ CGGCGGCGTTAGATCCACGCTCCGCCCTTTCTCCCCCTGCAGGGCAACCCCACGGACGTC
rJMSF051E13+ CGGCGGCGTTAGATCCACGCTCCGCCCTTTCTCCCCCTGCAGGGCAACCCCACGGACGTC
JMFF031H05+ CGGTGGCGTTAGATCCACGCTCCGCCCTTTCTCCCCCTGCAGGGCAACCCCACGGACGTC
JMSF034M22+ CGGCGGCGTTAGATCCACGCTCCGCCCTTTCTCCCCCTGCAGGGCAACCCCACGGACGTC
____________________________________________________________
consensus CGGCGGCGTTAGATCCACGCTCCGCCCTTTCTCCCCCTGCAGGGCAACCCCACGGACGTC
. : . : . : . : . : . :
JMSF038P13+ CGACCCGTTCTGTAGCCTTCTAATCTTCTCCATCTCTTCATCCACTGCAACTTCATTGTG
rJMSF051E13+ CGACCCGTTCTGTAGCCTTCTAATCTTCTCCATCTCTTCATCCACTGCAACTTCATTGTG
JMFF031H05+ CGACCCGTTCTGTAGCCTTCTAATCTTCTCCATCTCTTCATCCACTGCAACTTCATTGTG
JMSF034M22+ CGACCCGTTCTGTAGCCTTCTAATCTTCTCCATCTCTTCATCAACTGCAACTTCATTGTG
____________________________________________________________
consensus CGACCCGTTCTGTAGCCTTCTAATCTTCTCCATCTCTTCATCCACTGCAACTTCATTGTG
. : . : . : . : . : . :
JMSF038P13+ CTTATTAGCAGTTAACGACGACTCTACCCGCAACGAAAGCTTGATTTTTGGGAATGATTG
rJMSF051E13+ CTTATTAGCAGTTAACGACGACTCTACCCGCAACGAAAGCTTGATTTTTGGGAATGATTG
JMFF031H05+ CTTATTAGCAGTTAACGACGACTCTACCCGCAACGAAAGCTTGATTTTTGGGAATGATTG
JMSF034M22+ CTTATTAGCAGTTAACGACGACTCTACCCGCAACGAAAGCTTGATTTTTGGGAATGATTG
____________________________________________________________
consensus CTTATTAGCAGTTAACGACGACTCTACCCGCAACGAAAGCTTGATTTTTGGGAATGATTG
. : . : . : . : . : . :
JMSF038P13+ AGCTATCCCAAGGCTTCTGTGGAGTGGTTTGTGTATGGGGAATGAAGGAAAGTTAGGTTT
rJMSF051E13+ AGCTATCCCAAGGCTTCTGTGGAGTGGTTTGTGTATGGGGAATGAAGGAAAGTTAGGTTT
JMFF031H05+ AGCTATCCCAAGGCTTCTGTGGAGTGGTTTGTGTATGGGGAATGAAGGAAAGTTAGGTTT
JMSF034M22+ AGCTATCCCAAGGCTTCTGTGGAGTGGTTTGTGTATGGGGAATGAAGGAAAGTTAGGTTT
____________________________________________________________
consensus AGCTATCCCAAGGCTTCTGTGGAGTGGTTTGTGTATGGGGAATGAAGGAAAGTTAGGTTT
. : . : . : . : . : . :
JMSF038P13+ TGAAGCAATGGTTTGTAAAGATTGTGGTGTTGTAGAAGTGGAAGCCATTGTAAACGATTT
rJMSF051E13+ TGAAGCAATGGTTTGTAAAGATTGTGGTGTTGTAGAAGTGGAAGCCATTGTAAACGATTT
JMFF031H05+ TGAAGCAATGGTTTGTAAAGATTGTGGTGTTGTAGAAGTGGAAGCCATTGTAAACGATTT
JMSF034M22+ TGAAGCAATGGTTTGTAAAGATTGTGGTGTTGTAGAAGTGGAAGCCATTGTAAACGATTT
____________________________________________________________
consensus TGAAGCAATGGTTTGTAAAGATTGTGGTGTTGTAGAAGTGGAAGCCATTGTAAACGATTT
. : . : . : . : . : . :
JMSF038P13+ CT
rJMSF051E13+ CTGCGGAAAATTTGGGTTGCAGCATGTATGTATGTAAAAGATATT
JMFF031H05+ CTGCGGAAAATTTGGGTTGCAGCATGTATGTATGTAAAAGATATTTGGAAGTGAACTCC
JMSF034M22+ CTGCGGAAAATTTGGGTTGCAGCATGTATGTATGTAAAAGATATTTGGAAGTGAACTCCC
____________________________________________________________
consensus CTGCGGAAAATTTGGGTTGCAGCATGTATGTATGTAAAAGATATTTGGAAGTGAACTCCC