Contig 010794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039C16Sequence480010794 (5)718002853 (5)ref|XP_010323795.1|4e-19PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]
JMFF042D08Sequence652010794 (5)ref|XP_006449140.1|6e-08hypothetical protein CICLE_v10015528mg [Citrus clementina] gb|ESR62380.1| hypoth616002853 (5)ref|XP_009624518.1|3e-14PREDICTED: mediator-associated protein 1-like [Nicotiana tomentosiformis]
JMSF022N14Sequence674010794 (5)ref|XP_010109556.1|4e-12hypothetical protein L484_018291 [Morus notabilis] gb|EXC23160.1| hypothetical p793002853 (5)ref|XP_010323795.1|2e-16PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]
JMSF034H03Sequence625010794 (5)723002853 (5)ref|XP_010323795.1|5e-20PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]
JMSF048I09Sequence708010794 (5)ref|XP_010109556.1|2e-15hypothetical protein L484_018291 [Morus notabilis] gb|EXC23160.1| hypothetical p761002853 (5)ref|XP_010323795.1|2e-16PREDICTED: mediator-associated protein 1-like isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF048I09+                                        GAGTTCTGGAAATATCAGCCTGTAATTTCCC
                      ____________________________________________________________
consensus                                          GAGTTCTGGAAATATCAGCCTGTAATTTCCC
 
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JMSF022N14+              AATAAATTCATGGAAAGCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
JMFF042D08+                              GCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
JMSF048I09+           CTTAATAAATTCATGGAAAGCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
                      ____________________________________________________________
consensus             CTTAATAAATTCATGGAAAGCAGACAAATCAGCAGAAGGGTCAGCCCCTTTTTGGTTCTT
 
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JMSF022N14+           GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
JMFF042D08+           GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
JMSF048I09+           GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
                      ____________________________________________________________
consensus             GTAATCAATCATACCTTCTAGAACAGCAATTTCATCGTCCTCGTTCCACACCCTGTTAAA
 
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JMSF022N14+           CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
JMFF042D08+           CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
JMSF048I09+           CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
JMSF034H03+                                              CCGCATTCCCATCTTCTTCCCCGGA
                      ____________________________________________________________
consensus             CCCGGCAGAAGCCGAACCTGGAACCTTCTTCTCCTCCGCATTCCCATCTTCTTCCCCGGA
 
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JMSF022N14+           CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMFF042D08+           CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMFF039C16+                           GCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMSF048I09+           CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
JMSF034H03+           CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
                      ____________________________________________________________
consensus             CTTGAGTTTCTTCTTCGCCGACTCTCTTACAGGGGTCTCCATCGGCCGCTTTGCCGGGGG
 
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JMSF022N14+           CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMFF042D08+           CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMFF039C16+           CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMSF048I09+           CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
JMSF034H03+           CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
                      ____________________________________________________________
consensus             CTTTGAGGCCGGAGGGGCATTAGAAGGGAGGTTAGTTTTGATTGTGAAGTCCGAAACGGA
 
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JMSF022N14+           ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMFF042D08+           ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMFF039C16+           ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMSF048I09+           ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
JMSF034H03+           ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
                      ____________________________________________________________
consensus             ATGCGAGGGTTCGGTGTGTTGAGAAGAATCCGAGCCCTCTTCGTCGGATTCAGATTCGGA
 
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JMSF022N14+           TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMFF042D08+           TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMFF039C16+           TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMSF048I09+           TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
JMSF034H03+           TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
                      ____________________________________________________________
consensus             TCCGGAGGAAGATTGTGGCTTTTGAACGGTGGGCTTCTTCGACAATAGCGGCGGCGAAGG
 
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JMSF022N14+           GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMFF042D08+           GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMFF039C16+           GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMSF048I09+           GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
JMSF034H03+           GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
                      ____________________________________________________________
consensus             GGCCCTTTTGGGTGGTTGCTCCGGTGCCTTTTTGGGTGCTTGTTCAGGGGCTTCTTCATC
 
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JMSF022N14+           TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMFF042D08+           TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMFF039C16+           TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMSF048I09+           TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
JMSF034H03+           TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
                      ____________________________________________________________
consensus             TTCTTCCTCGGATTCTTCTTCAGAGTTTTGGGTTTCTTCTTCCGGGTCGGATTCTTCCTC
 
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JMSF022N14+           GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMFF042D08+           GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMFF039C16+           GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMSF048I09+           GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
JMSF034H03+           GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
                      ____________________________________________________________
consensus             GTCTTCAGATGAAGATGCAGATGGTGGCTGGTCTACTAGACGCGTCTGGGATTTGGGAGC
 
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JMSF022N14+           CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMFF042D08+           CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMFF039C16+           CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMSF048I09+           CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
JMSF034H03+           CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
                      ____________________________________________________________
consensus             CATTATTGTTTCTGAGAACGCTCAAGACGAAGAAAGAGGCAACAGAAGCCTTGGAGAATT
 
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JMSF022N14+           GGAGAGCAACTAGTAC                                            
JMFF042D08+           GGAGAGCAACT                                                 
JMFF039C16+           GGAGAGCAACTAGTAC                                            
JMSF048I09+           GGAGAGCAACTAGTAC                                            
JMSF034H03+           GGAGAGCAACTAGTACGAGCGGCTTGTTTAGGGTTTTGCATTATATATACTCCTCAAACA
                      ____________________________________________________________
consensus             GGAGAGCAACTAGTACGAGCGGCTTGTTTAGGGTTTTGCATTATATATACTCCTCAAACA
 
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JMSF034H03+           TCGTACCTGTAAAGTTTGAGCCCATTTATGTCCGGCTTTTTAAATTGTTCTGCTTCCCCC
                      ____________________________________________________________
consensus             TCGTACCTGTAAAGTTTGAGCCCATTTATGTCCGGCTTTTTAAATTGTTCTGCTTCCCCC