Contig 010787:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033L08Sequence689010787 (2)ref|XP_009768202.1|174PREDICTED: uncharacterized protein LOC104219252 [Nicotiana sylvestris] ref|XP_00744024626ref|XP_007031531.1|4e-60Uncharacterized protein TCM_047031 [Theobroma cacao] gb|EOY02457.1| Uncharacteri
JMSF049P15Sequence658010787 (2)ref|XP_009768202.1|191PREDICTED: uncharacterized protein LOC104219252 [Nicotiana sylvestris] ref|XP_00763020539ref|XP_007031531.1|2e-41Uncharacterized protein TCM_047031 [Theobroma cacao] gb|EOY02457.1| Uncharacteri

Alignment

This contig is upended


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JMSF049P15+                                           CCAGTTTTCACTCCGTGCAGATATCCTT
                      ____________________________________________________________
consensus                                             CCAGTTTTCACTCCGTGCAGATATCCTT
 
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JMSF049P15+           TACCAGAGAGAGCTATATGCAAACCTTGCTCCTCATCCATCCGTATACAATCACTGAAAT
JMSF033L08+                                          CTCATCCATCNGTATACAATCACTGAAAT
                      ____________________________________________________________
consensus             TACCAGAGAGAGCTATATGCAAACCTTGCTCCTCATCCATCCGTATACAATCACTGAAAT
 
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JMSF049P15+           TGTTTGTTGTTTTGTAATGGAGGTAGCACCCATAAATAGAAAACAGTGATCCAAACAGAA
JMSF033L08+           TGTTTGTTGTTTTGTAATGGAGGTAGCACCCATAAATAGAAAACAGTGATCCAAACAGAA
                      ____________________________________________________________
consensus             TGTTTGTTGTTTTGTAATGGAGGTAGCACCCATAAATAGAAAACAGTGATCCAAACAGAA
 
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JMSF049P15+           AGTAAATGGTAACCAACATAAATGTCCACTGAGTATAATAGAAAAACAGGTCAGCACCAT
JMSF033L08+           AGTAAATGGTAACCAACATAAATGTCCACTGAGTATAATAGAAAAACAGGTCAGCACCAT
                      ____________________________________________________________
consensus             AGTAAATGGTAACCAACATAAATGTCCACTGAGTATAATAGAAAAACAGGTCAGCACCAT
 
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JMSF049P15+           GAACAACGACATCAGCAGTAAGTGCTGCTGCCAGTAAAATAAATGCAACTAATCGGAAAA
JMSF033L08+           GAACAACGACATCAGCAGTAAGTGCTGCTGCCAGTAAAATAAATGCAACTAATCGGAAAA
                      ____________________________________________________________
consensus             GAACAACGACATCAGCAGTAAGTGCTGCTGCCAGTAAAATAAATGCAACTAATCGGAAAA
 
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JMSF049P15+           CCATCAAAATAACTGGGTGTAATTCTTTCACACATGGTCTCCAAGCCTCATCAAACCAGA
JMSF033L08+           CCATCAAAATAACTGGGTGTAATTCTTTCACACATGGTCTCCAAGCCTCATCAAACCAGA
                      ____________________________________________________________
consensus             CCATCAAAATAACTGGGTGTAATTCTTTCACACATGGTCTCCAAGCCTCATCAAACCAGA
 
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JMSF049P15+           AAAGCCAAGATTTCTCTTGCCACTTATCCCTTCCATCGGATTCAGAATTGTCCCCTGCTG
JMSF033L08+           AAAGCCAAGATTTCTCTTGCCACTTATCCCTTCCATCGGATTCAGAATTGTCCCCTGCTG
                      ____________________________________________________________
consensus             AAAGCCAAGATTTCTCTTGCCACTTATCCCTTCCATCGGATTCAGAATTGTCCCCTGCTG
 
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JMSF049P15+           AAGATTCATATTTCCATATTAAAACTAGTCCTAAAACTATGGACGTCAAGACCCATGTTG
JMSF033L08+           AAGATTCATATTTCCATATTAAAACTAGTCCTAAAACTATGGACGTCAAGACCCATGTTG
                      ____________________________________________________________
consensus             AAGATTCATATTTCCATATTAAAACTAGTCCTAAAACTATGGACGTCAAGACCCATGTTG
 
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JMSF049P15+           CACAGAGCACAGCCCTCCAATTCCACCAATAACTTAGGGTAGTACTGTCAGCAGCCACCA
JMSF033L08+           CACAGAGCACAGCCCTCCAATTCCACCAATAACTTAGGGTAGTACTGTCAGCAGCCACCA
                      ____________________________________________________________
consensus             CACAGAGCACAGCCCTCCAATTCCACCAATAACTTAGGGTAGTACTGTCAGCAGCCACCA
 
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JMSF049P15+           TGAGTTGTTGCATCCTGTCGAAGATGCAACCTTACTCTCACTTCCTTAGTCTGATCTCAG
JMSF033L08+           TGAGTTGTTGCATCCTGTCGAAGATGCAACCTTACTTTCACTTCCTTAGTCTGATCTCAG
                      ____________________________________________________________
consensus             TGAGTTGTTGCATCCTGTCGAAGATGCAACCTTACTTTCACTTCCTTAGTCTGATCTCAG
 
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JMSF049P15+           AATCACAATGACCGGACTGCAGAGGATGGCGAAGCTGTGCGTGGTGGCGCCGCCGCCGGG
JMSF033L08+           AATCACAATGACCGGACTGCAGAGGATGGCGAAGCTGTGCGTGGTGGCGCCGCCGCCGGG
                      ____________________________________________________________
consensus             AATCACAATGACCGGACTGCAGAGGATGGCGAAGCTGTGCGTGGTGGCGCCGCCGCCGGG
 
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JMSF049P15+           GAATGGGGGACGACTTTGTGCGTTGGAAC                               
JMSF033L08+           GAATGGGGGACGACTTTGTGCGTTGGAACAGGTAAAAATGTTTTCCTCGTTTATTATTTC
                      ____________________________________________________________
consensus             GAATGGGGGACGACTTTGTGCGTTGGAACAGGTAAAAATGTTTTCCTCGTTTATTATTTC
 
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JMSF033L08+           TTATTATTATTGCAACAGTTGAAGAAGAAGAGGAAGCGTCTGGTTTATTCCGTTCTATCA
                      ____________________________________________________________
consensus             TTATTATTATTGCAACAGTTGAAGAAGAAGAGGAAGCGTCTGGTTTATTCCGTTCTATCA