Contig 010780:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018B20+                                        AAAACAGACCGGAGAGTCAAAGATTATTGN
                      ____________________________________________________________
consensus                                           AAAACAGACCGGAGAGTCAAAGATTATTGN
 
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rJMSF018B20+          CAAGGAAGGAGGGTTACGTCTTAAGGATAATTTTGAAGGGGGAGCAACATGGGCATACGA
                      ____________________________________________________________
consensus             CAAGGAAGGAGGGTTACGTCTTAAGGATAATTTTGAAGGGGGAGCAACATGGGCATACGA
 
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rJMSF018B20+          GGTTGGATCGGAGTCTATGGTTTGCCCTATCATCGTCGAGGATCTAAATCAGCCTCGTCA
                      ____________________________________________________________
consensus             GGTTGGATCGGAGTCTATGGTTTGCCCTATCATCGTCGAGGATCTAAATCAGCCTCGTCA
 
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rJMSF018B20+          GATGCTTGTGGAGATGCTTTGTGAACAACGTGGCTTCTTCCTGGAAATTGCTGACATTAT
                      ____________________________________________________________
consensus             GATGCTTGTGGAGATGCTTTGTGAACAACGTGGCTTCTTCCTGGAAATTGCTGACATTAT
 
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rJMSF018B20+          TCGAGGATTAGGACTGACTATATTGAAGGGGGTCATGGAAACGAAGAATGAGAAAATATG
                      ____________________________________________________________
consensus             TCGAGGATTAGGACTGACTATATTGAAGGGGGTCATGGAAACGAAGAATGAGAAAATATG
 
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rJMSF018B20+          GGCACGATTTACTGTTGAGGCTAACAGAGACATAACAAGGATGGAGATATTTATATCCCT
                      ____________________________________________________________
consensus             GGCACGATTTACTGTTGAGGCTAACAGAGACATAACAAGGATGGAGATATTTATATCCCT
 
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rJMSF018B20+          CGTTCATCTCTTGGAGCAAACAACAAAAAATGGAGTGGAAACAACGCCCAATGGTACTGA
                      ____________________________________________________________
consensus             CGTTCATCTCTTGGAGCAAACAACAAAAAATGGAGTGGAAACAACGCCCAATGGTACTGA
 
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rJMSF018B20+          TAATGAAGCAATGAAGGGTCACCAGTTCCACCAAGCAGCCAGTAGTTTGCACTGATCCAC
                      ____________________________________________________________
consensus             TAATGAAGCAATGAAGGGTCACCAGTTCCACCAAGCAGCCAGTAGTTTGCACTGATCCAC
 
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rJMSF018B20+          CATGGCACGATCGAACGGCCTGTGTCTGGATATACGTTAAGAGCGAGCGACCATCGTGCT
                      ____________________________________________________________
consensus             CATGGCACGATCGAACGGCCTGTGTCTGGATATACGTTAAGAGCGAGCGACCATCGTGCT
 
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rJMSF018B20+          TGCCATGACTAACTTCACTCCAGGTAGATCCTTTTGGTGGTCCGGTCCAAATGTTAACTC
rJMSF032J01+                                  TAGATCCTTTTGGTGGTCCGGTCCAAATGTTAACTC
JMSF032J01-                                   TAGATCCTTTTGGTGGTCCGGTCCAAATGTTAACTC
                      ____________________________________________________________
consensus             TGCCATGACTAACTTCACTCCAGGTAGATCCTTTTGGTGGTCCGGTCCAAATGTTAACTC
 
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rJMSF018B20+          TGATCTTGTGCTCGTCCTGTAGTCCTGTATCTAAATCTGAAGTCTGTCTGGGCTAGGAAG
rJMSF032J01+          TGATCTTGTGCTCGTCCTGTAGTCCTGTATCTAAATCTGAAGTCTGTCTGGGCTAGGAAG
JMSF032J01-           TGATCTTGTGCTCGTCCTGTAGTCCTGTATCTAAATCTGAAGTCTGTCTGGGCTAGGAAG
                      ____________________________________________________________
consensus             TGATCTTGTGCTCGTCCTGTAGTCCTGTATCTAAATCTGAAGTCTGTCTGGGCTAGGAAG
 
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rJMSF018B20+          ATTTGATTATTCGATGACTTGAGTGAGAGTATTGTATTTCCAGAATGTATGTATTACTGA
rJMSF032J01+          ATTTGATTATTCGATGACTTGAGTGAGAGTATTGTATTTCCAGAATGTATGTATTACTGA
JMSF032J01-           ATTTGATTATTCGATGACTTGAGTGAGAGTATTGTATTTCCAGAATGTATGTATTACTGA
                      ____________________________________________________________
consensus             ATTTGATTATTCGATGACTTGAGTGAGAGTATTGTATTTCCAGAATGTATGTATTACTGA
 
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rJMSF018B20+          GCCCGACTCTTAGCGCAACGAGGCTCTAGAACATATATATGTATCCCTAG          
rJMSF032J01+          GCCCGACTCTTAGCGCAACGAGGCTCTAGAACATATATATGTATCCCTAGCTAGCTAGGA
JMSF032J01-           GCCCGACTCTTAGCGCAACGAGGCTCTAGAACATATATATGTATCCCTAGCTAGCTAGGA
                      ____________________________________________________________
consensus             GCCCGACTCTTAGCGCAACGAGGCTCTAGAACATATATATGTATCCCTAGCTAGCTAGGA
 
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rJMSF032J01+          TGAGTGTTGATTGCATAAATTACGTAGTTTATTTGATTCATCTCCTTGAAGC        
JMSF032J01-           TGAGTGTTGATTGCATAAATTACGTAGTTTATTTGATTCATCTCCTTGAAGCAGTAGTTT
                      ____________________________________________________________
consensus             TGAGTGTTGATTGCATAAATTACGTAGTTTATTTGATTCATCTCCTTGAAGCAGTAGTTT
 
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JMSF032J01-           GTTTGTGTAGGTGAAACTATTTTCTTTTAAATGGAGTGTTGATTCAGATCAAAAAAAAAA
                      ____________________________________________________________
consensus             GTTTGTGTAGGTGAAACTATTTTCTTTTAAATGGAGTGTTGATTCAGATCAAAAAAAAAA